RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 MRFAP1L1Q96HT8 127 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 RIOX1Q9H6W3 641 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 NRDE2Q9H7Z3 1164 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 SIRPGQ9P1W8 387 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 PPARGC1AQ9UBK2 798 aaKnown RBP4.89□□□□□ -1.63
PHC3-216ENST00000497171 ZNHIT2Q9UHR6 403 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 FAM184BQ9ULE4 1060 aa4.89□□□□□ -1.63
PHC3-216ENST00000497171 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 MASP2O00187 686 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.63
PHC3-216ENST00000497171 ADRA1BP35368 520 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 MRE11P49959 708 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 PCOLCEQ15113 449 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 NFE2L2Q16236 605 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 TBR1Q16650 682 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 NBPF6Q5VWK0 638 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 ZKSCAN2Q63HK3 967 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 RPUSD2Q8IZ73 545 aaKnown RBP4.88□□□□□ -1.63
PHC3-216ENST00000497171 NLGN4XQ8N0W4 816 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 SYNE4Q8N205 404 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 OR14K1Q8NGZ2 314 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 NBPF4Q96M43 638 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 ZFYVE21Q9BQ24 234 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 EPN3Q9H201 632 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 PIF1Q9H611 641 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 ADARB2Q9NS39 739 aaKnown RBP4.88□□□□□ -1.63
PHC3-216ENST00000497171 CDK11AQ9UQ88 783 aaPredicted RBP4.88□□□□□ -1.63
PHC3-216ENST00000497171 TELO2Q9Y4R8 837 aa4.88□□□□□ -1.63
PHC3-216ENST00000497171 B2RBV5 119 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 COL10A1Q03692 680 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 EIF4HQ15056 248 aaKnown RBP4.87□□□□□ -1.63
PHC3-216ENST00000497171 DDR2Q16832 855 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 BTBD8Q5XKL5 378 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 LBX2Q6XYB7 198 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 EEPD1Q7L9B9 569 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 FILIP1Q7Z7B0 1213 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 GPR135Q8IZ08 494 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 DCAF4Q8WV16 495 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 HAS1Q92839 578 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
PHC3-216ENST00000497171 ALG1Q9BT22 464 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 IER2Q9BTL4 223 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 INCENPQ9NQS7 918 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 RIC8BQ9NVN3 520 aa4.87□□□□□ -1.63
PHC3-216ENST00000497171 PMS2P1A4D2B8 440 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 ACOT7O00154 380 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 TRAF5O00463 557 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 MSCO60682 206 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 GJB6O95452 261 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
PHC3-216ENST00000497171 PTGS1P23219 599 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 IFRD2Q12894 506 aaPredicted RBP4.86□□□□□ -1.63
PHC3-216ENST00000497171 SYCE2Q6PIF2 218 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 Q6ZPA2 131 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 LARP4Q71RC2 724 aaKnown RBP eCLIP4.86□□□□□ -1.63
PHC3-216ENST00000497171 GSPT2Q8IYD1 628 aaKnown RBP4.86□□□□□ -1.63
PHC3-216ENST00000497171 DEPDC7Q96QD5 511 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
PHC3-216ENST00000497171 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 A0A1W2PRX2 142 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 PPFIA4O75335 1185 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 SOD2P04179 222 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 CDK4P11802 303 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 CD38P28907 300 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 GJA4P35212 333 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 MAN2A2P49641 1150 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 PPP2R2AP63151 447 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 IL13RA1P78552 427 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 SERINC3Q13530 473 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
PHC3-216ENST00000497171 STRIP1Q5VSL9 837 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 GIMAP6Q6P9H5 292 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 NOP9Q86U38 636 aaKnown RBP4.85□□□□□ -1.63
PHC3-216ENST00000497171 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.85□□□□□ -1.63
PHC3-216ENST00000497171 MIEF2Q96C03 454 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 GALNT8Q9NY28 637 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 SNTG2Q9NY99 539 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 Q9UFV3 132 aa4.85□□□□□ -1.63
PHC3-216ENST00000497171 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
PHC3-216ENST00000497171 A0A0A6YYK5 440 aaPredicted RBP4.84□□□□□ -1.63
PHC3-216ENST00000497171 PTPN1P18031 435 aaKnown RBP4.84□□□□□ -1.63
PHC3-216ENST00000497171 C21orf58P58505 322 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 GPR85P60893 370 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 RIN1Q13671 783 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 PTPAQ15257 358 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 SPTY2D1Q68D10 685 aaPredicted RBP4.84□□□□□ -1.63
PHC3-216ENST00000497171 PRIMA1Q86XR5 153 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 IFNL3Q8IZI9 196 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
PHC3-216ENST00000497171 MKL1Q969V6 931 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 PACSIN3Q9UKS6 424 aa4.84□□□□□ -1.63
PHC3-216ENST00000497171 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 ZAR1LA6NP61 321 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 PDPK1O15530 556 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 HGFACQ04756 655 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 MTERF2Q49AM1 385 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 LY6G5CQ5SRR4 150 aa4.83□□□□□ -1.64
PHC3-216ENST00000497171 MBNL2Q5VZF2 373 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms