RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Tgm5Q9D7I9 724 aa17.01■□□□□ 0.31
Vcan-201ENSMUST00000109543 Gm45194A0A140LJG2 572 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Guca2bO09051 106 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Itgb5O70309 798 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Slc16a2O70324 545 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Fgfr2P21803 821 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Psmd1Q3TXS7 953 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 P4ha1Q60715 534 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 E2f7Q6S7F2 904 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Usp17leQ7M764 540 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 TbataQ7TSD4 393 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Snip1Q8BIZ6 383 aaKnown RBP17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Camkk2Q8C078 588 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cbwd1Q8VEH6 393 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Arfgap2Q99K28 520 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Angptl3Q9R182 455 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cntnap5cQ0V8T7 1305 aa17■□□□□ 0.31
Vcan-201ENSMUST00000109543 Zswim8Q3UHH1 1832 aaKnown RBP17■□□□□ 0.31
Vcan-201ENSMUST00000109543 DohhA0A1Y7VJ29 135 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 XlrP05531 208 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Lmntd2Q0VET5 664 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Zfp91Q62511 572 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Btnl9Q8BJE2 536 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Vps52Q8C754 723 aaKnown RBP16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Bzw2Q91VK1 419 aaKnown RBP16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Kdm4bQ91VY5 1086 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 PdhbQ9D051 359 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 AatfQ9JKX4 526 aaKnown RBP16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Oip5A2AQ14 241 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Nova2D3YVV7 556 aaKnown RBP16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Tp53P02340 387 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Slc12a2P55012 1205 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Parp10Q8CIE4 960 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 PdxkQ8K183 312 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Rnf34Q99KR6 376 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Hyou1Q9JKR6 999 aaKnown RBP16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 EcsitQ9QZH6 435 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Fem1bQ9Z2G0 627 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cntnap2Q9CPW0 1332 aa16.99■□□□□ 0.31
Vcan-201ENSMUST00000109543 Gjc1P28229 396 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Exoc3Q6KAR6 755 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Pgrmc2Q80UU9 217 aaKnown RBP16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Btbd7Q8CFE5 1130 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Calml4Q91WQ9 153 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Ndfip2Q91ZP6 311 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Mageb16Q9CWV4 363 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Fthl17aQ9DAX0 182 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Lztfl1Q9JHQ5 299 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 CenphQ9QYM8 241 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Gfpt2Q9Z2Z9 682 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Fam129cD3YZB0 591 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Gimap9G3X987 291 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Dhx15O35286 795 aaKnown RBP16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cyp11b2P15539 500 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Erbb2P70424 1256 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 FntaQ61239 377 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 PrimpolQ6P1E7 537 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Raver2Q7TPD6 673 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Il17cQ8K4C5 194 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 OtoaQ8K561 1137 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Golph3Q9CRA5 298 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 Hebp1Q9R257 190 aa16.98■□□□□ 0.31
Vcan-201ENSMUST00000109543 1700018F24RikB2RW27 314 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Nap1l1P28656 391 aaKnown RBP16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Msantd2Q6NZR2 559 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Vipas39Q8BGQ1 491 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Sun2Q8BJS4 731 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Spire2Q8K1S6 718 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Sapcd2Q9D818 391 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Tlr2Q9QUN7 784 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Smchd1Q6P5D8 2007 aaKnown RBP16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Odf2A3KGV1 830 aaKnown RBP16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Magea4F2Z493 315 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Flot1O08917 428 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Polr2fP61219 127 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Zhx1P70121 873 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Krt15Q61414 452 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Gja3Q64448 417 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Q6PD19 689 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 H6pdQ8CFX1 789 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Spata2Q8K004 515 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cse1lQ9ERK4 971 aaKnown RBP16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 EmcnQ9R0H2 261 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Extl3Q9WVL6 918 aa16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Tjp2Q9Z0U1 1167 aaKnown RBP16.97■□□□□ 0.31
Vcan-201ENSMUST00000109543 Kmt2eQ3UG20 1868 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Serpinb8O08800 374 aaKnown RBP16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 PltpP55065 493 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Acot6Q32Q92 419 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 4933427I04RikQ3V053 235 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Zbtb7bQ64321 544 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Trappc12Q8K2L8 797 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Reep2Q8VCD6 254 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Dnajc14Q921R4 703 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Snx10Q9CWT3 201 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Cacna1fQ9JIS7 1985 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Tspoap1Q7TNF8 1846 aa16.96■□□□□ 0.31
Vcan-201ENSMUST00000109543 Heatr4E9Q357 955 aa16.96■□□□□ 0.3
Vcan-201ENSMUST00000109543 Gm4758L7N258 96 aa16.96■□□□□ 0.3
Vcan-201ENSMUST00000109543 Pja1O55176 578 aa16.96■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms