Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Gm25239-201ENSMUST00000174915 86 ntBASIC36.42■■■■□ 3.42
FntaQ61239 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
FntaQ61239 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
FntaQ61239 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
FntaQ61239 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
FntaQ61239 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
FntaQ61239 Psd-208ENSMUST00000224556 2034 ntBASIC34.12■■■■□ 3.05
FntaQ61239 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
FntaQ61239 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
FntaQ61239 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
FntaQ61239 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
FntaQ61239 Gm15042-201ENSMUST00000120212 883 ntBASIC32.73■■■□□ 2.83
FntaQ61239 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
FntaQ61239 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
FntaQ61239 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
FntaQ61239 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
FntaQ61239 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.3■■■□□ 2.76
FntaQ61239 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
FntaQ61239 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
FntaQ61239 Gm15045-201ENSMUST00000117359 883 ntBASIC32.17■■■□□ 2.74
FntaQ61239 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
FntaQ61239 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
FntaQ61239 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
FntaQ61239 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
FntaQ61239 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
FntaQ61239 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
FntaQ61239 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
FntaQ61239 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
FntaQ61239 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
FntaQ61239 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.37■■■□□ 2.61
FntaQ61239 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
FntaQ61239 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
FntaQ61239 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
FntaQ61239 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
FntaQ61239 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
FntaQ61239 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
FntaQ61239 Gm24109-201ENSMUST00000175489 103 ntBASIC31.18■■■□□ 2.58
FntaQ61239 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
FntaQ61239 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.16■■■□□ 2.58
FntaQ61239 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
FntaQ61239 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.1■■■□□ 2.57
FntaQ61239 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
FntaQ61239 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
FntaQ61239 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.93■■■□□ 2.54
FntaQ61239 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
FntaQ61239 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.87■■■□□ 2.53
FntaQ61239 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
FntaQ61239 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
FntaQ61239 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.65■■■□□ 2.5
FntaQ61239 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.62■■■□□ 2.49
FntaQ61239 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
FntaQ61239 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
FntaQ61239 Gm23366-201ENSMUST00000175022 89 ntBASIC30.55■■■□□ 2.48
FntaQ61239 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
FntaQ61239 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
FntaQ61239 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
FntaQ61239 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
FntaQ61239 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
FntaQ61239 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
FntaQ61239 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
FntaQ61239 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
FntaQ61239 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
FntaQ61239 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.02■■■□□ 2.4
FntaQ61239 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
FntaQ61239 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
FntaQ61239 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
FntaQ61239 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
FntaQ61239 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
FntaQ61239 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.81■■■□□ 2.36
FntaQ61239 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
FntaQ61239 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
FntaQ61239 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
FntaQ61239 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
FntaQ61239 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
FntaQ61239 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
FntaQ61239 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FntaQ61239 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
FntaQ61239 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
FntaQ61239 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
FntaQ61239 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
FntaQ61239 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
FntaQ61239 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
FntaQ61239 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FntaQ61239 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
FntaQ61239 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FntaQ61239 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
FntaQ61239 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.39■■■□□ 2.29
FntaQ61239 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
FntaQ61239 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.34■■■□□ 2.29
FntaQ61239 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.31■■■□□ 2.28
FntaQ61239 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
FntaQ61239 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
FntaQ61239 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
FntaQ61239 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
FntaQ61239 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
FntaQ61239 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
FntaQ61239 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
FntaQ61239 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.04■■■□□ 2.24
FntaQ61239 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
FntaQ61239 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms