RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR52, Length 92 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR52	snR52	ASN2	P49090	572 aa	Known RBP	0.27	□□□□□ -2.37
snR52	snR52	SHE4	P51534	789 aa		0.27	□□□□□ -2.37
snR52	snR52	ALF1	P53904	254 aa		0.27	□□□□□ -2.37
snR52	snR52	YDR115W	Q04598	105 aa		0.27	□□□□□ -2.37
snR52	snR52	SRO7	Q12038	1033 aa		0.27	□□□□□ -2.37
snR52	snR52	SCEI	P03882	235 aa		0.26	□□□□□ -2.37
snR52	snR52	CUP2	P15315	225 aa		0.26	□□□□□ -2.37
snR52	snR52	SPS19	P32573	292 aa	Known RBP	0.26	□□□□□ -2.37
snR52	snR52	SOR1	P35497	357 aa	Known RBP	0.26	□□□□□ -2.37
snR52	snR52	YKR032W	P36127	104 aa		0.26	□□□□□ -2.37
snR52	snR52	SHE1	P38200	338 aa		0.26	□□□□□ -2.37
snR52	snR52	CST26	P38226	397 aa		0.26	□□□□□ -2.37
snR52	snR52	YEL057C	P39983	233 aa		0.26	□□□□□ -2.37
snR52	snR52	PHO86	P46956	311 aa		0.26	□□□□□ -2.37
snR52	snR52	ROG1	P53118	685 aa		0.26	□□□□□ -2.37
snR52	snR52	RMI1	Q02685	241 aa		0.26	□□□□□ -2.37
snR52	snR52	YMR155W	Q03795	547 aa		0.26	□□□□□ -2.37
snR52	snR52	SNT309	Q06091	175 aa	Predicted RBP	0.26	□□□□□ -2.37
snR52	snR52	SOR2	Q07786	357 aa		0.26	□□□□□ -2.37
snR52	snR52	FOB1	O13329	566 aa		0.25	□□□□□ -2.37
snR52	snR52	SEC53	P07283	254 aa	Known RBP	0.25	□□□□□ -2.37
snR52	snR52	COX10	P21592	462 aa		0.25	□□□□□ -2.37
snR52	snR52	ANP1	P32629	500 aa		0.25	□□□□□ -2.37
snR52	snR52	CMC1	P36064	111 aa		0.25	□□□□□ -2.37
snR52	snR52	SMC2	P38989	1170 aa	Known RBP	0.25	□□□□□ -2.37
snR52	snR52	BDH1	P39714	382 aa		0.25	□□□□□ -2.37
snR52	snR52	TOS3	P43637	560 aa		0.25	□□□□□ -2.37
snR52	snR52	CTK3	P46963	296 aa	Predicted RBP	0.25	□□□□□ -2.37
snR52	snR52	SMD1	Q02260	146 aa	Predicted RBP	0.25	□□□□□ -2.37
snR52	snR52	MSC3	Q05812	728 aa		0.25	□□□□□ -2.37
snR52	snR52	RLP24	Q07915	199 aa	Known RBP	0.25	□□□□□ -2.37
snR52	snR52	YOR283W	Q12040	230 aa	Known RBP	0.25	□□□□□ -2.37
snR52	snR52	SEM1	O94742	89 aa		0.24	□□□□□ -2.37
snR52	snR52	CHA1	P25379	360 aa	Known RBP	0.24	□□□□□ -2.37
snR52	snR52	MED6	P38782	295 aa		0.24	□□□□□ -2.37
snR52	snR52	HXT14	P42833	540 aa		0.24	□□□□□ -2.37
snR52	snR52	APC4	Q04601	652 aa		0.24	□□□□□ -2.37
snR52	snR52	NCA2	Q12374	616 aa		0.24	□□□□□ -2.37
snR52	snR52	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
snR52	snR52	MET2	P08465	486 aa		0.23	□□□□□ -2.37
snR52	snR52	IMA3	P0CW40	589 aa		0.23	□□□□□ -2.37
snR52	snR52	IMA4	P0CW41	589 aa		0.23	□□□□□ -2.37
snR52	snR52	HPR1	P17629	752 aa	Known RBP	0.23	□□□□□ -2.37
snR52	snR52	DAL81	P21657	970 aa		0.23	□□□□□ -2.37
snR52	snR52	RHB1	P25378	209 aa		0.23	□□□□□ -2.37
snR52	snR52	SPO23	P33757	523 aa		0.23	□□□□□ -2.37
snR52	snR52	NOP4	P37838	685 aa	Known RBP	0.23	□□□□□ -2.37
snR52	snR52	WSC4	P38739	605 aa		0.23	□□□□□ -2.37
snR52	snR52	PRM1	P53835	661 aa		0.23	□□□□□ -2.37
snR52	snR52	VPS75	P53853	264 aa		0.23	□□□□□ -2.37
snR52	snR52	YML131W	Q03102	365 aa		0.23	□□□□□ -2.37
snR52	snR52	GTO3	Q04806	366 aa		0.23	□□□□□ -2.37
snR52	snR52	RQC1	Q05468	723 aa	Known RBP	0.23	□□□□□ -2.37
snR52	snR52	IMA2	Q08295	589 aa		0.23	□□□□□ -2.37
snR52	snR52	ATG29	Q12092	213 aa		0.23	□□□□□ -2.37
snR52	snR52	YDL211C	Q12121	372 aa		0.23	□□□□□ -2.37
snR52	snR52	SSC1	P0CS90	654 aa	Known RBP	0.22	□□□□□ -2.37
snR52	snR52	UNG1	P12887	359 aa		0.22	□□□□□ -2.37
snR52	snR52	KRE1	P17260	313 aa		0.22	□□□□□ -2.37
snR52	snR52	PMT1	P33775	817 aa		0.22	□□□□□ -2.37
snR52	snR52	TOM20	P35180	183 aa		0.22	□□□□□ -2.37
snR52	snR52	ATP3	P38077	311 aa	Known RBP	0.22	□□□□□ -2.37
snR52	snR52	YBR056W	P38081	501 aa		0.22	□□□□□ -2.37
snR52	snR52	RPS0B	P46654	252 aa	Known RBP	0.22	□□□□□ -2.37
snR52	snR52	NAS6	P50086	228 aa		0.22	□□□□□ -2.37
snR52	snR52	YGR015C	P53208	328 aa		0.22	□□□□□ -2.37
snR52	snR52	MEP3	P53390	489 aa		0.22	□□□□□ -2.37
snR52	snR52	RNH201	P53942	307 aa		0.22	□□□□□ -2.37
snR52	snR52	GMC1	Q04399	608 aa		0.22	□□□□□ -2.37
snR52	snR52	MYO5	Q04439	1219 aa	Known RBP	0.22	□□□□□ -2.37
snR52	snR52	PEX30	Q06169	523 aa		0.22	□□□□□ -2.37
snR52	snR52	HTZ1	Q12692	134 aa	Known RBP	0.22	□□□□□ -2.37
snR52	snR52	TFS1	P14306	219 aa		0.21	□□□□□ -2.38
snR52	snR52	MET8	P15807	274 aa		0.21	□□□□□ -2.38
snR52	snR52	CLB1	P24868	471 aa		0.21	□□□□□ -2.38
snR52	snR52	RSA4	P25382	515 aa	Known RBP	0.21	□□□□□ -2.38
snR52	snR52	HXT3	P32466	567 aa	Known RBP	0.21	□□□□□ -2.38
snR52	snR52	YEL043W	P32618	956 aa		0.21	□□□□□ -2.38
snR52	snR52	MRS6	P32864	603 aa	Known RBP	0.21	□□□□□ -2.38
snR52	snR52	DOT5	P40553	215 aa		0.21	□□□□□ -2.38
snR52	snR52	YCH1	P42937	148 aa		0.21	□□□□□ -2.38
snR52	snR52	CGI121	Q03705	181 aa	Known RBP	0.21	□□□□□ -2.38
snR52	snR52	YDR222W	Q04925	415 aa		0.21	□□□□□ -2.38
snR52	snR52	TFC7	Q12415	435 aa		0.21	□□□□□ -2.38
snR52	snR52	PRP46	Q12417	451 aa	Predicted RBP	0.21	□□□□□ -2.38
snR52	snR52	YML133C	Q03099	1374 aa		0.2	□□□□□ -2.38
snR52	snR52	YLL067C	Q07888	1374 aa		0.2	□□□□□ -2.38
snR52	snR52	YLL066C	Q99208	1374 aa		0.2	□□□□□ -2.38
snR52	snR52	RPS18A	P0CX55	146 aa	Known RBP	0.2	□□□□□ -2.38
snR52	snR52	RPS18B	P0CX56	146 aa	Predicted RBP	0.2	□□□□□ -2.38
snR52	snR52	HOM3	P10869	527 aa		0.2	□□□□□ -2.38
snR52	snR52	CPT1	P17898	393 aa		0.2	□□□□□ -2.38
snR52	snR52	BEM1	P29366	551 aa		0.2	□□□□□ -2.38
snR52	snR52	TIP20	P33891	701 aa		0.2	□□□□□ -2.38
snR52	snR52	POP2	P39008	433 aa		0.2	□□□□□ -2.38
snR52	snR52	JJJ1	P53863	590 aa		0.2	□□□□□ -2.38
snR52	snR52	REX2	P54964	269 aa	Known RBP	0.2	□□□□□ -2.38
snR52	snR52	MRX11	Q03079	207 aa		0.2	□□□□□ -2.38
snR52	snR52	OPY2	Q06810	360 aa		0.2	□□□□□ -2.38
snR52	snR52	FLO11	P08640	1367 aa		0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms