RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	UBX2	Q04228	584 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	EMI2	Q04409	500 aa	Known RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	AIM33	Q04516	312 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	RPS10A	Q08745	105 aa	Predicted RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	YOR365C	Q08844	703 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	YPR022C	Q12139	1133 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	SIA1	Q12212	622 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	RNH203	Q12338	110 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	NPC2	Q12408	173 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	CHO2	P05374	869 aa	Known RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	HIS5	P07172	385 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	PEP4	P07267	405 aa	Known RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	SPO23	P33757	523 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	CBR1	P38626	284 aa	Known RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	ANS1	P38832	159 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	LCP5	P40079	357 aa	Predicted RBP	3.18	□□□□□ -1.9
TOP1	YOL006C	COA1	P40452	197 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	YJL163C	P46996	555 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	RRN9	P53437	365 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	MPS1	P54199	764 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	MRS2	Q01926	470 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	RIM13	Q03792	727 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	SMP3	Q04174	516 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	FAR8	Q05040	523 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	YDL144C	Q07589	356 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	THP1	Q08231	455 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	LCB4	Q12246	624 aa		3.18	□□□□□ -1.9
TOP1	YOL006C	HTB1	P02293	131 aa	Known RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	HTB2	P02294	131 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	REV1	P12689	985 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	RBK1	P25332	333 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	MEI4	P29467	408 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	SHP1	P34223	423 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	TAF14	P35189	244 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	FES1	P38260	290 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	YER079W	P40052	210 aa	Known RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	BTT1	P40314	149 aa	Predicted RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	GAB1	P41733	394 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	RPS10B	P46784	105 aa	Known RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	YJR011C	P47086	261 aa	Predicted RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	SPT20	P50875	604 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	PMT5	P52867	743 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	GET1	P53192	235 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	ALG11	P53954	548 aa	Known RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	EBS1	Q03466	884 aa	Known RBP	3.17	□□□□□ -1.9
TOP1	YOL006C	GAS5	Q08193	484 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	NCE102	Q12207	173 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
TOP1	YOL006C	TUS1	Q06412	1307 aa		3.17	□□□□□ -1.9
TOP1	YOL006C	OPI3	P05375	206 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	ADE5,7	P07244	802 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	DST1	P07273	309 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YBR121C-A	P0C5L4	52 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	MRP1	P10662	321 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	CLN3	P13365	580 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	CKI1	P20485	582 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	RAD57	P25301	460 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	FUB1	P25659	250 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	AME1	P38313	324 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	VBA2	P38358	474 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	CCT2	P39076	527 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	ICP55	P40051	511 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YNL194C	P40169	301 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	AGE2	P40529	298 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	SAS2	P40963	338 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	CHA4	P43634	648 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	LSM1	P47017	172 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	RPC17	P47076	161 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	COX16	P47081	118 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YIP4	P53093	235 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	BIO4	P53630	237 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YPL068C	Q02749	293 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	NUP53	Q03790	475 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	PEX12	Q04370	399 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YKL183C-A	Q3E765	70 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YCL012C	Q8J0M4	134 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	Q0010	Q9ZZX9	128 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	RPL12A	P0CX53	165 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	RPL12B	P0CX54	165 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	POX1	P13711	748 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	HPR1	P17629	752 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	RPO26	P20435	155 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	FAR1	P21268	830 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	MET22	P32179	357 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	ZUO1	P32527	433 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	PDR3	P33200	976 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	DTR1	P38125	572 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	YPT10	P38146	199 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	TCM62	P38228	572 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	SOP4	P39543	234 aa	Predicted RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	LAS21	P40367	830 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	LYS12	P40495	371 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	MRPL22	P53881	309 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	RNT1	Q02555	471 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	CTF19	Q02732	369 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	RVB1	Q03940	463 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	ARO10	Q06408	635 aa		3.16	□□□□□ -1.9
TOP1	YOL006C	BER1	Q06688	274 aa	Known RBP	3.16	□□□□□ -1.9
TOP1	YOL006C	PPR1	P07272	904 aa	Predicted RBP	3.15	□□□□□ -1.9
TOP1	YOL006C	WHI2	P12611	486 aa		3.15	□□□□□ -1.9
TOP1	YOL006C	YMR31	P19955	123 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms