RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C ARF1P11076 181 aaKnown RBP4.4□□□□□ -1.7
CTF18YMR078C PAN6P40459 309 aa4.4□□□□□ -1.7
CTF18YMR078C YJR085CP47131 105 aaKnown RBP4.4□□□□□ -1.7
CTF18YMR078C NUP116Q02630 1113 aa4.4□□□□□ -1.7
CTF18YMR078C FDH1Q08911 376 aa4.4□□□□□ -1.7
CTF18YMR078C CEX1Q12453 761 aa4.4□□□□□ -1.7
CTF18YMR078C POM152P39685 1337 aa4.4□□□□□ -1.71
CTF18YMR078C PAB1P04147 577 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
CTF18YMR078C GDT1P38301 280 aaPredicted RBP4.4□□□□□ -1.71
CTF18YMR078C EFM3P47163 339 aa4.4□□□□□ -1.71
CTF18YMR078C YOP1Q12402 180 aa4.4□□□□□ -1.71
CTF18YMR078C TPK3P05986 398 aa4.39□□□□□ -1.71
CTF18YMR078C MNS1P32906 549 aa4.39□□□□□ -1.71
CTF18YMR078C MRM2P53123 320 aa4.39□□□□□ -1.71
CTF18YMR078C YOR012WQ12351 137 aa4.39□□□□□ -1.71
CTF18YMR078C ANP1P32629 500 aa4.38□□□□□ -1.71
CTF18YMR078C MCR1P36060 302 aaKnown RBP4.38□□□□□ -1.71
CTF18YMR078C UIP5P36137 443 aa4.38□□□□□ -1.71
CTF18YMR078C YHK8P38776 514 aa4.38□□□□□ -1.71
CTF18YMR078C PTK1P36002 662 aaPredicted RBP4.38□□□□□ -1.71
CTF18YMR078C DOA1P36037 715 aa4.38□□□□□ -1.71
CTF18YMR078C COX14P39103 70 aa4.38□□□□□ -1.71
CTF18YMR078C ATP22P50273 684 aaPredicted RBP4.38□□□□□ -1.71
CTF18YMR078C HRI1Q05905 244 aaKnown RBP4.38□□□□□ -1.71
CTF18YMR078C ADH2P00331 348 aaKnown RBP4.37□□□□□ -1.71
CTF18YMR078C CLN3P13365 580 aa4.37□□□□□ -1.71
CTF18YMR078C POP5P28005 173 aa4.37□□□□□ -1.71
CTF18YMR078C ARO2P28777 376 aaKnown RBP4.37□□□□□ -1.71
CTF18YMR078C PAD1P33751 242 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
CTF18YMR078C MDE1P47095 244 aa4.37□□□□□ -1.71
CTF18YMR078C BTN2P53286 410 aa4.37□□□□□ -1.71
CTF18YMR078C RDS1P25611 832 aa4.37□□□□□ -1.71
CTF18YMR078C YEL043WP32618 956 aa4.37□□□□□ -1.71
CTF18YMR078C SWD3P38123 315 aa4.37□□□□□ -1.71
CTF18YMR078C YGR210CP42942 411 aa4.37□□□□□ -1.71
CTF18YMR078C FYV8P46949 817 aaKnown RBP4.37□□□□□ -1.71
CTF18YMR078C LCB3P47013 409 aa4.37□□□□□ -1.71
CTF18YMR078C TDA1Q03533 586 aa4.37□□□□□ -1.71
CTF18YMR078C STE3P06783 470 aa4.36□□□□□ -1.71
CTF18YMR078C CSE2P33308 149 aa4.36□□□□□ -1.71
CTF18YMR078C YIL029CP40538 142 aa4.36□□□□□ -1.71
CTF18YMR078C CUE3P53137 624 aaKnown RBP4.36□□□□□ -1.71
CTF18YMR078C MPS2P53159 387 aa4.36□□□□□ -1.71
CTF18YMR078C PDR16P53860 351 aaKnown RBP4.36□□□□□ -1.71
CTF18YMR078C PET123P17558 318 aa4.36□□□□□ -1.71
CTF18YMR078C SMI1P32566 505 aa4.36□□□□□ -1.71
CTF18YMR078C AIM45Q12480 344 aaKnown RBP4.36□□□□□ -1.71
CTF18YMR078C YCR024C-BQ3E7Z8 88 aa4.36□□□□□ -1.71
CTF18YMR078C RPS16AP0CX51 143 aaKnown RBP4.35□□□□□ -1.71
CTF18YMR078C RPS16BP0CX52 143 aaKnown RBP4.35□□□□□ -1.71
CTF18YMR078C RRP46P53256 223 aaPredicted RBP4.35□□□□□ -1.71
CTF18YMR078C RET3P53600 189 aa4.35□□□□□ -1.71
CTF18YMR078C AQR1P53943 586 aa4.35□□□□□ -1.71
CTF18YMR078C DBR1P24309 405 aaKnown RBP4.34□□□□□ -1.71
CTF18YMR078C DAL2P25335 343 aa4.34□□□□□ -1.71
CTF18YMR078C KRR1P25586 316 aaPredicted RBP4.34□□□□□ -1.71
CTF18YMR078C RPA34P47006 233 aaPredicted RBP4.34□□□□□ -1.71
CTF18YMR078C SCW10Q04951 389 aa4.34□□□□□ -1.71
CTF18YMR078C RSA1Q08932 381 aa4.34□□□□□ -1.71
CTF18YMR078C YGK3Q12222 375 aaPredicted RBP4.34□□□□□ -1.71
CTF18YMR078C SAG1P20840 650 aa4.34□□□□□ -1.72
CTF18YMR078C PEX27Q08580 376 aa4.34□□□□□ -1.72
CTF18YMR078C TIR2P33890 251 aa4.33□□□□□ -1.72
CTF18YMR078C GEP4P38812 185 aa4.33□□□□□ -1.72
CTF18YMR078C NDE2Q07500 545 aa4.33□□□□□ -1.72
CTF18YMR078C ISY1P21374 235 aaPredicted RBP4.33□□□□□ -1.72
CTF18YMR078C YHR131CP38835 850 aa4.33□□□□□ -1.72
CTF18YMR078C LCP5P40079 357 aaPredicted RBP4.33□□□□□ -1.72
CTF18YMR078C YMR102CQ03177 834 aa4.33□□□□□ -1.72
CTF18YMR078C GAT3Q07928 141 aa4.33□□□□□ -1.72
CTF18YMR078C RRG7Q08774 242 aaPredicted RBP4.33□□□□□ -1.72
CTF18YMR078C HRT3Q12347 344 aa4.33□□□□□ -1.72
CTF18YMR078C TAL1P15019 335 aaKnown RBP4.32□□□□□ -1.72
CTF18YMR078C MSK1P32048 576 aa4.32□□□□□ -1.72
CTF18YMR078C SHE4P51534 789 aa4.32□□□□□ -1.72
CTF18YMR078C MTQ1P53944 314 aa4.32□□□□□ -1.72
CTF18YMR078C SPT10P35208 640 aa4.31□□□□□ -1.72
CTF18YMR078C PTI1P39927 425 aaPredicted RBP4.31□□□□□ -1.72
CTF18YMR078C AIM24P47127 394 aa4.31□□□□□ -1.72
CTF18YMR078C BNS1P50084 137 aa4.31□□□□□ -1.72
CTF18YMR078C YGL242CP53066 181 aa4.31□□□□□ -1.72
CTF18YMR078C RIF2Q06208 395 aa4.31□□□□□ -1.72
CTF18YMR078C NBL1Q3E7Y6 73 aa4.31□□□□□ -1.72
CTF18YMR078C YOR338WQ99326 363 aa4.31□□□□□ -1.72
CTF18YMR078C MSI1P13712 422 aa4.31□□□□□ -1.72
CTF18YMR078C VMA2P16140 517 aaKnown RBP4.31□□□□□ -1.72
CTF18YMR078C GRR1P24814 1151 aa4.31□□□□□ -1.72
CTF18YMR078C AIM33Q04516 312 aa4.31□□□□□ -1.72
CTF18YMR078C RTN1Q04947 295 aaKnown RBP4.31□□□□□ -1.72
CTF18YMR078C SMC5Q08204 1093 aa4.31□□□□□ -1.72
CTF18YMR078C MFG1Q07684 458 aa4.3□□□□□ -1.72
CTF18YMR078C EAF3Q12432 401 aa4.3□□□□□ -1.72
CTF18YMR078C IZH2Q12442 317 aa4.3□□□□□ -1.72
CTF18YMR078C SUP35P05453 685 aaKnown RBP4.3□□□□□ -1.72
CTF18YMR078C VAM7P32912 316 aa4.3□□□□□ -1.72
CTF18YMR078C LYS12P40495 371 aaKnown RBP4.3□□□□□ -1.72
CTF18YMR078C MST27P53176 234 aa4.3□□□□□ -1.72
CTF18YMR078C LOT6Q07923 191 aa4.3□□□□□ -1.72
CTF18YMR078C PIS1P06197 220 aaKnown RBP4.29□□□□□ -1.72
CTF18YMR078C NAM2P11325 894 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms