RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W MSN4P33749 630 aa2.3□□□□□ -2.04
HRD3YLR207W PAD1P33751 242 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
HRD3YLR207W MTR2P34232 184 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W QDR3P38227 689 aa2.3□□□□□ -2.04
HRD3YLR207W ARN1P38731 627 aa2.3□□□□□ -2.04
HRD3YLR207W GPI16P38875 610 aa2.3□□□□□ -2.04
HRD3YLR207W PAC11P40960 533 aa2.3□□□□□ -2.04
HRD3YLR207W TFG2P41896 400 aaPredicted RBP2.3□□□□□ -2.04
HRD3YLR207W RPL4BP49626 362 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W YTP1P53584 459 aa2.3□□□□□ -2.04
HRD3YLR207W RTC4P53850 401 aa2.3□□□□□ -2.04
HRD3YLR207W SHR3Q02774 210 aa2.3□□□□□ -2.04
HRD3YLR207W APC4Q04601 652 aa2.3□□□□□ -2.04
HRD3YLR207W ERV41Q04651 352 aa2.3□□□□□ -2.04
HRD3YLR207W HCR1Q05775 265 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W YLR173WQ06247 608 aa2.3□□□□□ -2.04
HRD3YLR207W ATG26Q06321 1198 aa2.3□□□□□ -2.04
HRD3YLR207W TSR1Q07381 788 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W YLL007CQ07799 665 aa2.3□□□□□ -2.04
HRD3YLR207W NSE1Q07913 336 aa2.3□□□□□ -2.04
HRD3YLR207W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
HRD3YLR207W LSP1Q12230 341 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W FRE7Q12333 620 aa2.3□□□□□ -2.04
HRD3YLR207W GAL4P04386 881 aa2.3□□□□□ -2.04
HRD3YLR207W YLL053CP0CD98 152 aa2.3□□□□□ -2.04
HRD3YLR207W SEC62P21825 274 aa2.3□□□□□ -2.04
HRD3YLR207W MRPL25P23369 157 aa2.3□□□□□ -2.04
HRD3YLR207W HXT2P23585 541 aa2.3□□□□□ -2.04
HRD3YLR207W GEX1P25596 615 aa2.3□□□□□ -2.04
HRD3YLR207W ADY2P25613 283 aa2.3□□□□□ -2.04
HRD3YLR207W YSC83P32792 385 aa2.3□□□□□ -2.04
HRD3YLR207W RGT1P32862 1170 aa2.3□□□□□ -2.04
HRD3YLR207W SOR1P35497 357 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W YET1P35723 206 aa2.3□□□□□ -2.04
HRD3YLR207W TVP38P36164 337 aa2.3□□□□□ -2.04
HRD3YLR207W MRPL10P36520 322 aa2.3□□□□□ -2.04
HRD3YLR207W TCM62P38228 572 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W PRP39P39682 629 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W PAC2P39937 518 aa2.3□□□□□ -2.04
HRD3YLR207W ATM1P40416 690 aa2.3□□□□□ -2.04
HRD3YLR207W GCN20P43535 752 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W IRC7P43623 340 aa2.3□□□□□ -2.04
HRD3YLR207W GCD14P46959 383 aaPredicted RBP2.3□□□□□ -2.04
HRD3YLR207W IMD3P50095 523 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W RIB4P50861 169 aaPredicted RBP2.3□□□□□ -2.04
HRD3YLR207W NBP1P52919 319 aaPredicted RBP2.3□□□□□ -2.04
HRD3YLR207W SMM1P53720 384 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W ATP23P53722 227 aa2.3□□□□□ -2.04
HRD3YLR207W DBP6P53734 629 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W YIF1P53845 314 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W DSL1P53847 754 aa2.3□□□□□ -2.04
HRD3YLR207W SLG1P54867 378 aa2.3□□□□□ -2.04
HRD3YLR207W EBS1Q03466 884 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W STE23Q06010 1027 aa2.3□□□□□ -2.04
HRD3YLR207W RRG8Q06109 277 aa2.3□□□□□ -2.04
HRD3YLR207W VAC14Q06708 880 aa2.3□□□□□ -2.04
HRD3YLR207W MDM36Q06820 579 aa2.3□□□□□ -2.04
HRD3YLR207W SOR2Q07786 357 aa2.3□□□□□ -2.04
HRD3YLR207W RKM1Q08961 583 aaPredicted RBP2.3□□□□□ -2.04
HRD3YLR207W BTS1Q12051 335 aa2.3□□□□□ -2.04
HRD3YLR207W RUP1Q12242 671 aa2.3□□□□□ -2.04
HRD3YLR207W ADF1Q2V2Q1 113 aa2.3□□□□□ -2.04
HRD3YLR207W PGK1P00560 416 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W SCEIP03882 235 aa2.29□□□□□ -2.04
HRD3YLR207W FUN19P28003 413 aaPredicted RBP2.29□□□□□ -2.04
HRD3YLR207W SUA5P32579 426 aa2.29□□□□□ -2.04
HRD3YLR207W SPR1P32603 445 aa2.29□□□□□ -2.04
HRD3YLR207W CBF5P33322 483 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
HRD3YLR207W SPT10P35208 640 aa2.29□□□□□ -2.04
HRD3YLR207W RTC2P38279 296 aa2.29□□□□□ -2.04
HRD3YLR207W RFC3P38629 340 aa2.29□□□□□ -2.04
HRD3YLR207W RRP4P38792 359 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W STN1P38960 494 aa2.29□□□□□ -2.04
HRD3YLR207W ERV46P39727 415 aa2.29□□□□□ -2.04
HRD3YLR207W YER079WP40052 210 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W GAT2P40209 560 aa2.29□□□□□ -2.04
HRD3YLR207W RPS10BP46784 105 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W YJR011CP47086 261 aaPredicted RBP2.29□□□□□ -2.04
HRD3YLR207W VPS25P47142 202 aa2.29□□□□□ -2.04
HRD3YLR207W YPT11P48559 417 aa2.29□□□□□ -2.04
HRD3YLR207W HSH155P49955 971 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W YNL234WP53857 426 aa2.29□□□□□ -2.04
HRD3YLR207W MRP51Q02950 344 aa2.29□□□□□ -2.04
HRD3YLR207W ARP10Q04549 284 aa2.29□□□□□ -2.04
HRD3YLR207W NRT1Q08485 598 aa2.29□□□□□ -2.04
HRD3YLR207W COX3P00420 269 aa2.29□□□□□ -2.04
HRD3YLR207W DST1P07273 309 aa2.29□□□□□ -2.04
HRD3YLR207W PEP5P12868 1029 aa2.29□□□□□ -2.04
HRD3YLR207W NUP1P20676 1076 aa2.29□□□□□ -2.04
HRD3YLR207W RPI1P23250 407 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W MEK1P24719 497 aaPredicted RBP2.29□□□□□ -2.04
HRD3YLR207W CLB2P24869 491 aa2.29□□□□□ -2.04
HRD3YLR207W SLM5P25345 492 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W PRR1P28708 518 aa2.29□□□□□ -2.04
HRD3YLR207W YPS1P32329 569 aa2.29□□□□□ -2.04
HRD3YLR207W PRP21P32524 280 aaPredicted RBP2.29□□□□□ -2.04
HRD3YLR207W RAD23P32628 398 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W RPT5P33297 434 aaKnown RBP2.29□□□□□ -2.04
HRD3YLR207W PPZ2P33329 710 aa2.29□□□□□ -2.04
HRD3YLR207W SCO2P38072 301 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms