RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C SSQ1Q05931 657 aaPredicted RBP1.9□□□□□ -2.11
TRL1YJL087C DIC1Q06143 298 aa1.9□□□□□ -2.11
TRL1YJL087C TSR1Q07381 788 aaKnown RBP1.9□□□□□ -2.11
TRL1YJL087C YLL056CQ12177 298 aa1.9□□□□□ -2.11
TRL1YJL087C PRP46Q12417 451 aaPredicted RBP1.9□□□□□ -2.11
TRL1YJL087C UBA3Q99344 299 aa1.9□□□□□ -2.11
TRL1YJL087C HIS4P00815 799 aaKnown RBP1.9□□□□□ -2.11
TRL1YJL087C BI2P03873 423 aa1.9□□□□□ -2.11
TRL1YJL087C RAD1P06777 1100 aa1.9□□□□□ -2.11
TRL1YJL087C HEM1P09950 548 aaPredicted RBP1.9□□□□□ -2.11
TRL1YJL087C MET16P18408 261 aaPredicted RBP1.9□□□□□ -2.11
TRL1YJL087C FAR1P21268 830 aa1.9□□□□□ -2.11
TRL1YJL087C SAT4P25333 603 aaKnown RBP1.9□□□□□ -2.11
TRL1YJL087C YCP4P25349 247 aaKnown RBP1.9□□□□□ -2.11
TRL1YJL087C APE2P32454 952 aaKnown RBP1.9□□□□□ -2.11
TRL1YJL087C MRPS5P33759 307 aa1.9□□□□□ -2.11
TRL1YJL087C AIM29P36154 155 aa1.9□□□□□ -2.11
TRL1YJL087C HIS2P38635 335 aa1.9□□□□□ -2.11
TRL1YJL087C SHO1P40073 367 aa1.9□□□□□ -2.11
TRL1YJL087C NAS6P50086 228 aa1.9□□□□□ -2.11
TRL1YJL087C KAP114P53067 1004 aa1.9□□□□□ -2.11
TRL1YJL087C PCP1P53259 346 aa1.9□□□□□ -2.11
TRL1YJL087C GPI1P53306 609 aa1.9□□□□□ -2.11
TRL1YJL087C BIO4P53630 237 aa1.9□□□□□ -2.11
TRL1YJL087C MRP51Q02950 344 aa1.9□□□□□ -2.11
TRL1YJL087C IZH1Q03419 316 aa1.9□□□□□ -2.11
TRL1YJL087C YMR206WQ03695 313 aa1.9□□□□□ -2.11
TRL1YJL087C CAC2Q04199 468 aa1.9□□□□□ -2.11
TRL1YJL087C GTO3Q04806 366 aa1.9□□□□□ -2.11
TRL1YJL087C SSK1Q07084 712 aa1.9□□□□□ -2.11
TRL1YJL087C YDL218WQ07629 317 aa1.9□□□□□ -2.11
TRL1YJL087C RAX1Q08760 435 aa1.9□□□□□ -2.11
TRL1YJL087C BTS1Q12051 335 aa1.9□□□□□ -2.11
TRL1YJL087C YLR111WQ12528 110 aa1.9□□□□□ -2.11
TRL1YJL087C CFT1Q06632 1357 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C TDH2P00358 332 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C RAD3P06839 778 aa1.89□□□□□ -2.11
TRL1YJL087C SPO12P17123 173 aa1.89□□□□□ -2.11
TRL1YJL087C RPB8P20436 146 aa1.89□□□□□ -2.11
TRL1YJL087C KIN3P22209 435 aa1.89□□□□□ -2.11
TRL1YJL087C YCR007CP25354 239 aa1.89□□□□□ -2.11
TRL1YJL087C YCR016WP25617 290 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C RPL5P26321 297 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C ICL1P28240 557 aaPredicted RBP1.89□□□□□ -2.11
TRL1YJL087C ZIP1P31111 875 aa1.89□□□□□ -2.11
TRL1YJL087C VMA5P31412 392 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C MEI5P32489 222 aa1.89□□□□□ -2.11
TRL1YJL087C SRB4P32569 687 aa1.89□□□□□ -2.11
TRL1YJL087C CBP4P37267 147 aa1.89□□□□□ -2.11
TRL1YJL087C SLM1P40485 686 aa1.89□□□□□ -2.11
TRL1YJL087C HMS2P47175 358 aa1.89□□□□□ -2.11
TRL1YJL087C STB4P50104 949 aa1.89□□□□□ -2.11
TRL1YJL087C YGR117CP53270 476 aa1.89□□□□□ -2.11
TRL1YJL087C MKC7P53379 596 aa1.89□□□□□ -2.11
TRL1YJL087C LGE1Q02796 332 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C ENT5Q03769 411 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C SMP3Q04174 516 aa1.89□□□□□ -2.11
TRL1YJL087C UBX2Q04228 584 aa1.89□□□□□ -2.11
TRL1YJL087C ASA1Q06822 443 aa1.89□□□□□ -2.11
TRL1YJL087C SHS1Q07657 551 aa1.89□□□□□ -2.11
TRL1YJL087C ACF2Q12168 779 aa1.89□□□□□ -2.11
TRL1YJL087C SIA1Q12212 622 aa1.89□□□□□ -2.11
TRL1YJL087C YOR029WQ12243 111 aa1.89□□□□□ -2.11
TRL1YJL087C YOS9Q99220 542 aa1.89□□□□□ -2.11
TRL1YJL087C SLM5P25345 492 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C CSM1P25651 190 aa1.89□□□□□ -2.11
TRL1YJL087C SKG6P32900 734 aaPredicted RBP1.89□□□□□ -2.11
TRL1YJL087C MYO3P36006 1272 aa1.89□□□□□ -2.11
TRL1YJL087C OSH3P38713 996 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C ATG7P38862 630 aa1.89□□□□□ -2.11
TRL1YJL087C LYS1P38998 373 aaRIP-Chip data1.89□□□□□ -2.11not detected
TRL1YJL087C DSE1P40077 573 aa1.89□□□□□ -2.11
TRL1YJL087C SIM1P40472 476 aa1.89□□□□□ -2.11
TRL1YJL087C YIR014WP40570 242 aa1.89□□□□□ -2.11
TRL1YJL087C SCD6P45978 349 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
TRL1YJL087C YJL043WP47053 257 aa1.89□□□□□ -2.11
TRL1YJL087C HAM1P47119 197 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C TRF5P48561 642 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C YIP1P53039 248 aa1.89□□□□□ -2.11
TRL1YJL087C YGR168CP53293 376 aa1.89□□□□□ -2.11
TRL1YJL087C FRE4P53746 719 aa1.89□□□□□ -2.11
TRL1YJL087C BET4Q00618 327 aa1.89□□□□□ -2.11
TRL1YJL087C MSS11Q03825 758 aa1.89□□□□□ -2.11
TRL1YJL087C SDO1Q07953 250 aaKnown RBP1.89□□□□□ -2.11
TRL1YJL087C SRL2Q12020 392 aa1.89□□□□□ -2.11
TRL1YJL087C APC2Q12440 853 aa1.89□□□□□ -2.11
TRL1YJL087C ADH2P00331 348 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C GAL4P04386 881 aa1.88□□□□□ -2.11
TRL1YJL087C AMD1P15274 810 aaKnown RBP1.88□□□□□ -2.11
TRL1YJL087C PRP16P15938 1071 aaPredicted RBP1.88□□□□□ -2.11
TRL1YJL087C RNQ1P25367 405 aa1.88□□□□□ -2.11
TRL1YJL087C PBN1P25580 416 aa1.88□□□□□ -2.11
TRL1YJL087C DOA1P36037 715 aa1.88□□□□□ -2.11
TRL1YJL087C SPC34P36131 295 aa1.88□□□□□ -2.11
TRL1YJL087C ECM4P36156 370 aa1.88□□□□□ -2.11
TRL1YJL087C PRS4P38063 326 aaPredicted RBP1.88□□□□□ -2.11
TRL1YJL087C YPK3P38070 525 aa1.88□□□□□ -2.11
TRL1YJL087C IST2P38250 946 aa1.88□□□□□ -2.11
TRL1YJL087C BIG1P38813 335 aa1.88□□□□□ -2.11
TRL1YJL087C CCT4P39078 528 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms