RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C CDC21P06785 304 aa2.67□□□□□ -1.98
PGD1YGL025C MDH1P17505 334 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
PGD1YGL025C FAD1P38913 306 aa2.67□□□□□ -1.98
PGD1YGL025C STE24P47154 453 aa2.67□□□□□ -1.98
PGD1YGL025C YGR018CP53211 109 aa2.67□□□□□ -1.98
PGD1YGL025C YGR111WP53265 400 aa2.67□□□□□ -1.98
PGD1YGL025C PRM6Q04705 352 aa2.67□□□□□ -1.98
PGD1YGL025C RNH203Q12338 110 aa2.67□□□□□ -1.98
PGD1YGL025C DBF4P32325 704 aa2.66□□□□□ -1.98
PGD1YGL025C PIB2P53191 635 aa2.66□□□□□ -1.98
PGD1YGL025C RRP46P53256 223 aaPredicted RBP2.66□□□□□ -1.98
PGD1YGL025C SPR6Q01684 191 aa2.66□□□□□ -1.98
PGD1YGL025C SKI8Q02793 397 aaPredicted RBP2.66□□□□□ -1.98
PGD1YGL025C RNY1Q02933 434 aaKnown RBP2.66□□□□□ -1.98
PGD1YGL025C VHS1Q03785 461 aa2.66□□□□□ -1.98
PGD1YGL025C YPR091CQ06833 770 aa2.66□□□□□ -1.98
PGD1YGL025C NSE1Q07913 336 aa2.66□□□□□ -1.98
PGD1YGL025C ISA2Q12425 185 aa2.66□□□□□ -1.98
PGD1YGL025C ADH1P00330 348 aaKnown RBP2.65□□□□□ -1.99
PGD1YGL025C PRB1P09232 635 aa2.65□□□□□ -1.99
PGD1YGL025C TOA2P32774 122 aa2.65□□□□□ -1.99
PGD1YGL025C GPX2P38143 162 aa2.65□□□□□ -1.99
PGD1YGL025C TIM17P39515 158 aa2.65□□□□□ -1.99
PGD1YGL025C YNL208WP40159 199 aaKnown RBP2.65□□□□□ -1.99
PGD1YGL025C PMT5P52867 743 aa2.65□□□□□ -1.99
PGD1YGL025C YPS5P53057 165 aa2.65□□□□□ -1.99
PGD1YGL025C RRN9P53437 365 aa2.65□□□□□ -1.99
PGD1YGL025C FCY22Q12119 530 aa2.65□□□□□ -1.99
PGD1YGL025C OPI3P05375 206 aa2.64□□□□□ -1.99
PGD1YGL025C CBP6P07253 162 aaPredicted RBP2.64□□□□□ -1.99
PGD1YGL025C MCR1P36060 302 aaKnown RBP2.64□□□□□ -1.99
PGD1YGL025C GPI18P38211 433 aa2.64□□□□□ -1.99
PGD1YGL025C QDR3P38227 689 aa2.64□□□□□ -1.99
PGD1YGL025C PFS1P38872 237 aa2.64□□□□□ -1.99
PGD1YGL025C ALF1P53904 254 aa2.64□□□□□ -1.99
PGD1YGL025C PRP3Q03338 469 aaPredicted RBP2.64□□□□□ -1.99
PGD1YGL025C ECM7Q06200 448 aa2.64□□□□□ -1.99
PGD1YGL025C YDL114WQ07530 308 aa2.64□□□□□ -1.99
PGD1YGL025C RPL12AP0CX53 165 aaKnown RBP2.63□□□□□ -1.99
PGD1YGL025C RPL12BP0CX54 165 aa2.63□□□□□ -1.99
PGD1YGL025C ZRC1P20107 442 aa2.63□□□□□ -1.99
PGD1YGL025C FUN26P31381 517 aa2.63□□□□□ -1.99
PGD1YGL025C NRP1P32770 719 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
PGD1YGL025C COX13P32799 129 aa2.63□□□□□ -1.99
PGD1YGL025C RAD5P32849 1169 aaPredicted RBP2.63□□□□□ -1.99
PGD1YGL025C LTV1P34078 463 aa2.63□□□□□ -1.99
PGD1YGL025C SKT5P34226 696 aa2.63□□□□□ -1.99
PGD1YGL025C MRPS9P38120 278 aa2.63□□□□□ -1.99
PGD1YGL025C ABM1P47146 123 aa2.63□□□□□ -1.99
PGD1YGL025C MKC7P53379 596 aa2.63□□□□□ -1.99
PGD1YGL025C DCI1Q08558 271 aa2.63□□□□□ -1.99
PGD1YGL025C YPQ1Q12010 308 aa2.63□□□□□ -1.99
PGD1YGL025C GPM3Q12326 303 aa2.63□□□□□ -1.99
PGD1YGL025C YOP1Q12402 180 aa2.63□□□□□ -1.99
PGD1YGL025C YDL199CQ12407 687 aa2.63□□□□□ -1.99
PGD1YGL025C TIR2P33890 251 aa2.62□□□□□ -1.99
PGD1YGL025C MRPL27P36526 146 aaPredicted RBP2.62□□□□□ -1.99
PGD1YGL025C ATM1P40416 690 aa2.62□□□□□ -1.99
PGD1YGL025C KEG1P43614 200 aa2.62□□□□□ -1.99
PGD1YGL025C URC2Q04411 772 aa2.62□□□□□ -1.99
PGD1YGL025C YHC1Q05900 231 aaKnown RBP2.62□□□□□ -1.99
PGD1YGL025C MCT1Q12283 360 aa2.62□□□□□ -1.99
PGD1YGL025C TPK3P05986 398 aa2.61□□□□□ -1.99
PGD1YGL025C PHO91P27514 894 aa2.61□□□□□ -1.99
PGD1YGL025C YSC83P32792 385 aa2.61□□□□□ -1.99
PGD1YGL025C ECM8P38246 354 aa2.61□□□□□ -1.99
PGD1YGL025C IGD1P43598 195 aa2.61□□□□□ -1.99
PGD1YGL025C ROG1P53118 685 aa2.61□□□□□ -1.99
PGD1YGL025C TPS1Q00764 495 aaKnown RBP2.61□□□□□ -1.99
PGD1YGL025C NDL1Q06568 189 aa2.61□□□□□ -1.99
PGD1YGL025C ARF1P11076 181 aaKnown RBP2.6□□□□□ -1.99
PGD1YGL025C SLM5P25345 492 aaKnown RBP2.6□□□□□ -1.99
PGD1YGL025C DEP1P31385 405 aa2.6□□□□□ -1.99
PGD1YGL025C GEP4P38812 185 aa2.6□□□□□ -1.99
PGD1YGL025C BUD27P43573 796 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
PGD1YGL025C YGL262WP53054 175 aa2.6□□□□□ -1.99
PGD1YGL025C ECM11Q04110 302 aa2.6□□□□□ -1.99
PGD1YGL025C HTZ1Q12692 134 aaKnown RBP2.6□□□□□ -1.99
PGD1YGL025C SMC6Q12749 1114 aa2.6□□□□□ -1.99
PGD1YGL025C ECT1P33412 323 aa2.59□□□□□ -1.99
PGD1YGL025C SPO23P33757 523 aa2.59□□□□□ -1.99
PGD1YGL025C DOA1P36037 715 aa2.59□□□□□ -1.99
PGD1YGL025C PAC11P40960 533 aa2.59□□□□□ -1.99
PGD1YGL025C TRM112P53738 135 aaPredicted RBP2.59□□□□□ -1.99
PGD1YGL025C MEH1Q02205 184 aa2.59□□□□□ -1.99
PGD1YGL025C PIN3Q06449 215 aa2.59□□□□□ -1.99
PGD1YGL025C ASA1Q06822 443 aa2.59□□□□□ -1.99
PGD1YGL025C NOP6Q07623 225 aaKnown RBP2.59□□□□□ -1.99
PGD1YGL025C IES4Q08561 116 aa2.59□□□□□ -1.99
PGD1YGL025C FOL3Q12676 427 aaPredicted RBP2.59□□□□□ -1.99
PGD1YGL025C PDE2P06776 526 aa2.58□□□□□ -2
PGD1YGL025C GIT1P25346 518 aa2.58□□□□□ -2
PGD1YGL025C CHA1P25379 360 aaKnown RBP2.58□□□□□ -2
PGD1YGL025C MPE1P35728 441 aaKnown RBP2.58□□□□□ -2
PGD1YGL025C SRP72P38688 640 aaKnown RBP2.58□□□□□ -2
PGD1YGL025C YML6P51998 286 aa2.58□□□□□ -2
PGD1YGL025C VHT1P53241 593 aa2.58□□□□□ -2
PGD1YGL025C RTT102P53330 157 aa2.58□□□□□ -2
PGD1YGL025C SPE3Q12074 293 aaKnown RBP2.58□□□□□ -2
PGD1YGL025C PCL9Q12477 304 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 103.7 ms