RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C ROT2P38138 954 aa5.85□□□□□ -1.47
CDC34YDR054C IST2P38250 946 aa5.85□□□□□ -1.47
CDC34YDR054C YPT35P38815 214 aaKnown RBP5.85□□□□□ -1.47
CDC34YDR054C CEM1P39525 442 aa5.85□□□□□ -1.47
CDC34YDR054C IAH1P41734 238 aa5.85□□□□□ -1.47
CDC34YDR054C ILM1P47155 203 aa5.85□□□□□ -1.47
CDC34YDR054C SCW11P53189 542 aa5.85□□□□□ -1.47
CDC34YDR054C COX18P53239 316 aa5.85□□□□□ -1.47
CDC34YDR054C YNR014WP53719 212 aa5.85□□□□□ -1.47
CDC34YDR054C GIP3Q03016 1276 aa5.85□□□□□ -1.47
CDC34YDR054C YMR010WQ03687 405 aa5.85□□□□□ -1.47
CDC34YDR054C VHS1Q03785 461 aa5.85□□□□□ -1.47
CDC34YDR054C HSP31Q04432 237 aa5.85□□□□□ -1.47
CDC34YDR054C YHC1Q05900 231 aaKnown RBP5.85□□□□□ -1.47
CDC34YDR054C YLR456WQ06199 204 aa5.85□□□□□ -1.47
CDC34YDR054C ATG29Q12092 213 aa5.85□□□□□ -1.47
CDC34YDR054C SUL2Q12325 893 aa5.85□□□□□ -1.47
CDC34YDR054C CCH1P50077 2039 aa5.85□□□□□ -1.47
CDC34YDR054C RAS2P01120 322 aaKnown RBP5.84□□□□□ -1.47
CDC34YDR054C DFR1P07807 211 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
CDC34YDR054C KIN2P13186 1147 aaKnown RBP5.84□□□□□ -1.47
CDC34YDR054C APN1P22936 367 aa5.84□□□□□ -1.47
CDC34YDR054C CPR2P23285 205 aa5.84□□□□□ -1.47
CDC34YDR054C TRX3P25372 127 aa5.84□□□□□ -1.47
CDC34YDR054C POL4P25615 582 aa5.84□□□□□ -1.47
CDC34YDR054C PRE4P30657 266 aa5.84□□□□□ -1.47
CDC34YDR054C SIN4P32259 974 aa5.84□□□□□ -1.47
CDC34YDR054C MRPL17P36528 281 aa5.84□□□□□ -1.47
CDC34YDR054C CBP4P37267 147 aa5.84□□□□□ -1.47
CDC34YDR054C GLY1P37303 387 aaKnown RBP5.84□□□□□ -1.47
CDC34YDR054C ATG7P38862 630 aa5.84□□□□□ -1.47
CDC34YDR054C FMO1P38866 432 aa5.84□□□□□ -1.47
CDC34YDR054C CTF8P38877 133 aa5.84□□□□□ -1.47
CDC34YDR054C AYR1P40471 297 aa5.84□□□□□ -1.47
CDC34YDR054C MET28P40573 187 aa5.84□□□□□ -1.47
CDC34YDR054C FMP32P43557 207 aa5.84□□□□□ -1.47
CDC34YDR054C ERG26P53199 349 aaKnown RBP5.84□□□□□ -1.47
CDC34YDR054C COS6P53344 381 aa5.84□□□□□ -1.47
CDC34YDR054C YNR068CP53754 272 aa5.84□□□□□ -1.47
CDC34YDR054C ERV25P54837 211 aaKnown RBP5.84□□□□□ -1.47
CDC34YDR054C REC102Q02721 264 aa5.84□□□□□ -1.47
CDC34YDR054C YAP6Q03935 383 aa5.84□□□□□ -1.47
CDC34YDR054C ECM11Q04110 302 aa5.84□□□□□ -1.47
CDC34YDR054C RNH1Q04740 348 aa5.84□□□□□ -1.47
CDC34YDR054C ASM4Q05166 528 aa5.84□□□□□ -1.47
CDC34YDR054C NSL1Q12143 216 aa5.84□□□□□ -1.47
CDC34YDR054C ADF1Q2V2Q1 113 aa5.84□□□□□ -1.47
CDC34YDR054C YJR112W-AQ3E743 109 aa5.84□□□□□ -1.47
CDC34YDR054C AI3P03877 415 aa5.83□□□□□ -1.48
CDC34YDR054C SEC12P11655 471 aa5.83□□□□□ -1.48
CDC34YDR054C SAM35P14693 329 aa5.83□□□□□ -1.48
CDC34YDR054C MSS116P15424 664 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C YAP1P19880 650 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C GRR1P24814 1151 aa5.83□□□□□ -1.48
CDC34YDR054C HCM1P25364 564 aa5.83□□□□□ -1.48
CDC34YDR054C DAD2P36162 133 aa5.83□□□□□ -1.48
CDC34YDR054C YCR087C-AP37263 153 aa5.83□□□□□ -1.48
CDC34YDR054C YHR097CP38809 366 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C GGC1P38988 300 aa5.83□□□□□ -1.48
CDC34YDR054C PLB1P39105 664 aa5.83□□□□□ -1.48
CDC34YDR054C VRG4P40107 337 aa5.83□□□□□ -1.48
CDC34YDR054C DIA3P52290 468 aa5.83□□□□□ -1.48
CDC34YDR054C GET1P53192 235 aa5.83□□□□□ -1.48
CDC34YDR054C SNF12P53628 566 aa5.83□□□□□ -1.48
CDC34YDR054C IDP3P53982 420 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C NGL2Q03264 515 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C EFR3Q03653 782 aaKnown RBP5.83□□□□□ -1.48
CDC34YDR054C MGR3Q04472 501 aa5.83□□□□□ -1.48
CDC34YDR054C SPC2Q04969 178 aa5.83□□□□□ -1.48
CDC34YDR054C GGA1Q06336 557 aa5.83□□□□□ -1.48
CDC34YDR054C MCM21Q06675 368 aa5.83□□□□□ -1.48
CDC34YDR054C VPS36Q06696 566 aa5.83□□□□□ -1.48
CDC34YDR054C SRO7Q12038 1033 aa5.83□□□□□ -1.48
CDC34YDR054C SNF8Q12483 233 aa5.83□□□□□ -1.48
CDC34YDR054C SEC39Q12745 709 aa5.83□□□□□ -1.48
CDC34YDR054C VCX1Q99385 411 aa5.83□□□□□ -1.48
CDC34YDR054C MSB2P32334 1306 aa5.82□□□□□ -1.48
CDC34YDR054C LAT1P12695 482 aaKnown RBP5.82□□□□□ -1.48
CDC34YDR054C YAK1P14680 807 aa5.82□□□□□ -1.48
CDC34YDR054C UGA1P17649 471 aa5.82□□□□□ -1.48
CDC34YDR054C SCL1P21243 252 aaKnown RBP5.82□□□□□ -1.48
CDC34YDR054C RVS161P25343 265 aaKnown RBP5.82□□□□□ -1.48
CDC34YDR054C IDH2P28241 369 aaKnown RBP5.82□□□□□ -1.48
CDC34YDR054C TFC1P32367 649 aa5.82□□□□□ -1.48
CDC34YDR054C MEI5P32489 222 aa5.82□□□□□ -1.48
CDC34YDR054C SEC17P32602 292 aa5.82□□□□□ -1.48
CDC34YDR054C NRP1P32770 719 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
CDC34YDR054C MRPL37P36532 105 aa5.82□□□□□ -1.48
CDC34YDR054C COS111P38308 924 aa5.82□□□□□ -1.48
CDC34YDR054C FAD1P38913 306 aa5.82□□□□□ -1.48
CDC34YDR054C ECM10P39987 644 aa5.82□□□□□ -1.48
CDC34YDR054C RGI1P40043 161 aaPredicted RBP5.82□□□□□ -1.48
CDC34YDR054C SLZ1P40167 298 aa5.82□□□□□ -1.48
CDC34YDR054C SDP1P40479 209 aa5.82□□□□□ -1.48
CDC34YDR054C DIM1P41819 318 aaKnown RBP5.82□□□□□ -1.48
CDC34YDR054C CIS3P47001 227 aa5.82□□□□□ -1.48
CDC34YDR054C BIO3P50277 480 aa5.82□□□□□ -1.48
CDC34YDR054C GPI1P53306 609 aa5.82□□□□□ -1.48
CDC34YDR054C YNL140CP53910 189 aa5.82□□□□□ -1.48
CDC34YDR054C YNL033WP53964 284 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms