RNA–Protein interactions for RNA: YDL224C

WHI4, Transcript of Putative RNA binding protein, yeast

Gene WHI4, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI4	YDL224C	BOR1	P53838	576 aa		4.75	□□□□□ -1.65
WHI4	YDL224C	RRN11	Q04712	507 aa		4.75	□□□□□ -1.65
WHI4	YDL224C	RTT103	Q05543	409 aa		4.75	□□□□□ -1.65
WHI4	YDL224C	ERV2	Q12284	196 aa		4.75	□□□□□ -1.65
WHI4	YDL224C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
WHI4	YDL224C	SDH3	P33421	198 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	SPT10	P35208	640 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	RET3	P53600	189 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	SPH1	Q06160	661 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	THR4	P16120	514 aa	Known RBP	4.74	□□□□□ -1.65
WHI4	YDL224C	MSK1	P32048	576 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	PRO2	P54885	456 aa	Known RBP	4.74	□□□□□ -1.65
WHI4	YDL224C	NUP116	Q02630	1113 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	ELP3	Q02908	557 aa	Known RBP	4.74	□□□□□ -1.65
WHI4	YDL224C	PBA1	Q05778	276 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	MDM36	Q06820	579 aa		4.74	□□□□□ -1.65
WHI4	YDL224C	PHO2	P07269	559 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	DBR1	P24309	405 aa	Known RBP	4.73	□□□□□ -1.65
WHI4	YDL224C	SNL1	P40548	159 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	ABM1	P47146	123 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	RPS8A	P0CX39	200 aa	Known RBP	4.73	□□□□□ -1.65
WHI4	YDL224C	RPS8B	P0CX40	200 aa	Known RBP	4.73	□□□□□ -1.65
WHI4	YDL224C	KAR9	P32526	644 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	TOA1	P32773	286 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	COX14	P39103	70 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	RRP46	P53256	223 aa	Predicted RBP	4.73	□□□□□ -1.65
WHI4	YDL224C	HER2	Q03557	464 aa		4.73	□□□□□ -1.65
WHI4	YDL224C	AIM45	Q12480	344 aa	Known RBP	4.73	□□□□□ -1.65
WHI4	YDL224C	RFS1	P38234	210 aa	Known RBP	4.72	□□□□□ -1.65
WHI4	YDL224C	SCS3	P53012	380 aa		4.72	□□□□□ -1.65
WHI4	YDL224C	MRM2	P53123	320 aa		4.72	□□□□□ -1.65
WHI4	YDL224C	CWC25	P53854	179 aa	Known RBP	4.72	□□□□□ -1.65
WHI4	YDL224C	ADA2	Q02336	434 aa		4.72	□□□□□ -1.65
WHI4	YDL224C	NDE2	Q07500	545 aa		4.72	□□□□□ -1.65
WHI4	YDL224C	YOR387C	Q08910	206 aa		4.72	□□□□□ -1.65
WHI4	YDL224C	MAS1	P10507	462 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	MNS1	P32906	549 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	YBL059W	P34224	193 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	HST1	P53685	503 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	RRB1	Q04225	511 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	YTH1	Q06102	208 aa	Predicted RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	YOR338W	Q99326	363 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	FSH3	Q99369	266 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	RPS16A	P0CX51	143 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	RPS16B	P0CX52	143 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	SPT15	P13393	240 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	CPR3	P25719	182 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	DPH5	P32469	300 aa	Predicted RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	GEP4	P38812	185 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	NDT80	P38830	627 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	LYS12	P40495	371 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	YIL029C	P40538	142 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	IMP4	P53941	290 aa	Known RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	AIM33	Q04516	312 aa		4.71	□□□□□ -1.66
WHI4	YDL224C	YMR310C	Q04867	317 aa	Predicted RBP	4.71	□□□□□ -1.66
WHI4	YDL224C	YUR1	P26725	428 aa		4.7	□□□□□ -1.66
WHI4	YDL224C	SRB2	P34162	210 aa		4.7	□□□□□ -1.66
WHI4	YDL224C	LCP5	P40079	357 aa	Predicted RBP	4.7	□□□□□ -1.66
WHI4	YDL224C	SPG5	P42933	373 aa		4.7	□□□□□ -1.66
WHI4	YDL224C	MGR3	Q04472	501 aa		4.7	□□□□□ -1.66
WHI4	YDL224C	AHC1	Q12433	566 aa		4.7	□□□□□ -1.66
WHI4	YDL224C	HHF1	P02309	103 aa	Known RBP	4.69	□□□□□ -1.66
WHI4	YDL224C	MAS2	P11914	482 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	GRR1	P24814	1151 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	NAM9	P27929	486 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	DEG1	P31115	442 aa	Known RBP	4.69	□□□□□ -1.66
WHI4	YDL224C	SUR1	P33300	382 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	TIR2	P33890	251 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	YHK8	P38776	514 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	PTH1	P38876	190 aa	Known RBP	4.69	□□□□□ -1.66
WHI4	YDL224C	OSW5	P40219	148 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	LCB3	P47013	409 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	HMX1	P32339	317 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	YHR122W	P38829	231 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	YCR024C-B	Q3E7Z8	88 aa		4.69	□□□□□ -1.66
WHI4	YDL224C	CLN3	P13365	580 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	HXT2	P23585	541 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	LIN1	P38852	340 aa	Predicted RBP	4.68	□□□□□ -1.66
WHI4	YDL224C	REE1	P40893	198 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	YJR085C	P47131	105 aa	Known RBP	4.68	□□□□□ -1.66
WHI4	YDL224C	YMR102C	Q03177	834 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	TDA1	Q03533	586 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	MRPL35	Q06678	367 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	TMS1	Q12116	473 aa		4.68	□□□□□ -1.66
WHI4	YDL224C	PES4	P39684	611 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	TRM112	P53738	135 aa	Predicted RBP	4.67	□□□□□ -1.66
WHI4	YDL224C	ARR1	Q06596	294 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	LOT6	Q07923	191 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	RTC5	Q12108	567 aa	Known RBP	4.67	□□□□□ -1.66
WHI4	YDL224C	MRPL8	P22353	238 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	EFB1	P32471	206 aa	Known RBP	4.67	□□□□□ -1.66
WHI4	YDL224C	VAM7	P32912	316 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
WHI4	YDL224C	PAN6	P40459	309 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	AIM24	P47127	394 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	GAT3	Q07928	141 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	YGK3	Q12222	375 aa	Predicted RBP	4.67	□□□□□ -1.66
WHI4	YDL224C	GLE1	Q12315	538 aa		4.67	□□□□□ -1.66
WHI4	YDL224C	PIS1	P06197	220 aa	Known RBP	4.66	□□□□□ -1.66
WHI4	YDL224C	CKI1	P20485	582 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms