RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YDR061WQ12298 539 aa3.12□□□□□ -1.91
UBC9YDL064W YOP1Q12402 180 aa3.12□□□□□ -1.91
UBC9YDL064W ARF1P11076 181 aaKnown RBP3.11□□□□□ -1.91
UBC9YDL064W SCH9P11792 824 aaKnown RBP3.11□□□□□ -1.91
UBC9YDL064W REV1P12689 985 aa3.11□□□□□ -1.91
UBC9YDL064W HXT1P32465 570 aa3.11□□□□□ -1.91
UBC9YDL064W DOA1P36037 715 aa3.11□□□□□ -1.91
UBC9YDL064W SDS24P38314 527 aa3.11□□□□□ -1.91
UBC9YDL064W PRE5P40302 234 aaKnown RBP3.11□□□□□ -1.91
UBC9YDL064W RRP46P53256 223 aaPredicted RBP3.11□□□□□ -1.91
UBC9YDL064W PRP3Q03338 469 aaPredicted RBP3.11□□□□□ -1.91
UBC9YDL064W YGK3Q12222 375 aaPredicted RBP3.11□□□□□ -1.91
UBC9YDL064W IZH2Q12442 317 aa3.11□□□□□ -1.91
UBC9YDL064W SKS1Q12505 502 aa3.11□□□□□ -1.91
UBC9YDL064W YCR024C-BQ3E7Z8 88 aa3.11□□□□□ -1.91
UBC9YDL064W RNA1P11745 407 aaKnown RBP3.1□□□□□ -1.91
UBC9YDL064W MSI1P13712 422 aa3.1□□□□□ -1.91
UBC9YDL064W RVS161P25343 265 aaKnown RBP3.1□□□□□ -1.91
UBC9YDL064W TIR2P33890 251 aa3.1□□□□□ -1.91
UBC9YDL064W SKT5P34226 696 aa3.1□□□□□ -1.91
UBC9YDL064W MCR1P36060 302 aaKnown RBP3.1□□□□□ -1.91
UBC9YDL064W LAS1P36146 502 aaPredicted RBP3.1□□□□□ -1.91
UBC9YDL064W AIM24P47127 394 aa3.1□□□□□ -1.91
UBC9YDL064W TIS11P47977 285 aa3.1□□□□□ -1.91
UBC9YDL064W BNS1P50084 137 aa3.1□□□□□ -1.91
UBC9YDL064W EOS1P53938 366 aa3.1□□□□□ -1.91
UBC9YDL064W ADA2Q02336 434 aa3.1□□□□□ -1.91
UBC9YDL064W YMR102CQ03177 834 aa3.1□□□□□ -1.91
UBC9YDL064W NDE2Q07500 545 aa3.1□□□□□ -1.91
UBC9YDL064W YFH1Q07540 174 aa3.1□□□□□ -1.91
UBC9YDL064W IRC25Q07951 179 aa3.1□□□□□ -1.91
UBC9YDL064W LDS2Q08218 356 aa3.1□□□□□ -1.91
UBC9YDL064W SMF3Q12078 473 aaPredicted RBP3.1□□□□□ -1.91
UBC9YDL064W CEX1Q12453 761 aa3.1□□□□□ -1.91
UBC9YDL064W PAB1P04147 577 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91 RIP-Chip
UBC9YDL064W LDB16P25587 256 aa3.09□□□□□ -1.91
UBC9YDL064W POT1P27796 417 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
UBC9YDL064W MSP1P28737 362 aa3.09□□□□□ -1.91
UBC9YDL064W GEP4P38812 185 aa3.09□□□□□ -1.91
UBC9YDL064W EGT2P42835 1041 aa3.09□□□□□ -1.91
UBC9YDL064W CRH1P53301 507 aa3.09□□□□□ -1.91
UBC9YDL064W PAL1Q05518 499 aaKnown RBP3.09□□□□□ -1.91
UBC9YDL064W RIF2Q06208 395 aa3.09□□□□□ -1.91
UBC9YDL064W MHR1Q06630 226 aa3.09□□□□□ -1.91
UBC9YDL064W PLP2Q12017 286 aa3.09□□□□□ -1.91
UBC9YDL064W YOR012WQ12351 137 aa3.09□□□□□ -1.91
UBC9YDL064W EAF3Q12432 401 aa3.09□□□□□ -1.91
UBC9YDL064W SUP35P05453 685 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W RPL6BP05739 176 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W FAA1P30624 700 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W VPH1P32563 840 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W MIG3P39943 394 aa3.08□□□□□ -1.92
UBC9YDL064W AIM10P39965 576 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W MST27P53176 234 aa3.08□□□□□ -1.92
UBC9YDL064W RPL6AQ02326 176 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W UTP6Q02354 440 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W RTN1Q04947 295 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W MFG1Q07684 458 aa3.08□□□□□ -1.92
UBC9YDL064W GAT3Q07928 141 aa3.08□□□□□ -1.92
UBC9YDL064W SMC5Q08204 1093 aa3.08□□□□□ -1.92
UBC9YDL064W WTM1Q12363 437 aaKnown RBP3.08□□□□□ -1.92
UBC9YDL064W SFG1Q12507 346 aa3.08□□□□□ -1.92
UBC9YDL064W PIS1P06197 220 aaKnown RBP3.07□□□□□ -1.92
UBC9YDL064W UBA1P22515 1024 aaKnown RBP3.07□□□□□ -1.92
UBC9YDL064W PTK1P36002 662 aaPredicted RBP3.07□□□□□ -1.92
UBC9YDL064W DAD2P36162 133 aa3.07□□□□□ -1.92
UBC9YDL064W BAT1P38891 393 aaKnown RBP3.07□□□□□ -1.92
UBC9YDL064W PTI1P39927 425 aaPredicted RBP3.07□□□□□ -1.92
UBC9YDL064W HAC1P41546 238 aa3.07□□□□□ -1.92
UBC9YDL064W BIR1P47134 954 aa3.07□□□□□ -1.92
UBC9YDL064W AAD15Q08361 143 aa3.07□□□□□ -1.92
UBC9YDL064W TFB5Q3E7C1 72 aaPredicted RBP3.07□□□□□ -1.92
UBC9YDL064W SRN2Q99176 213 aa3.07□□□□□ -1.92
UBC9YDL064W PSO2P30620 661 aa3.06□□□□□ -1.92
UBC9YDL064W ECM8P38246 354 aa3.06□□□□□ -1.92
UBC9YDL064W SIF2P38262 535 aa3.06□□□□□ -1.92
UBC9YDL064W YFR057WP43625 151 aa3.06□□□□□ -1.92
UBC9YDL064W SDT1P53078 280 aa3.06□□□□□ -1.92
UBC9YDL064W YNR068CP53754 272 aa3.06□□□□□ -1.92
UBC9YDL064W YLR152CP54072 576 aa3.06□□□□□ -1.92
UBC9YDL064W YPR078CQ06813 372 aa3.06□□□□□ -1.92
UBC9YDL064W YPR091CQ06833 770 aa3.06□□□□□ -1.92
UBC9YDL064W FCY22Q12119 530 aa3.06□□□□□ -1.92
UBC9YDL064W ANR2P36090 516 aaPredicted RBP3.05□□□□□ -1.92
UBC9YDL064W RTC2P38279 296 aa3.05□□□□□ -1.92
UBC9YDL064W MAM33P40513 266 aa3.05□□□□□ -1.92
UBC9YDL064W GAB1P41733 394 aa3.05□□□□□ -1.92
UBC9YDL064W ATG18P43601 500 aa3.05□□□□□ -1.92
UBC9YDL064W TRM112P53738 135 aaPredicted RBP3.05□□□□□ -1.92
UBC9YDL064W YNL143CP53908 130 aa3.05□□□□□ -1.92
UBC9YDL064W ADD37Q03233 198 aa3.05□□□□□ -1.92
UBC9YDL064W YDR286CQ05530 114 aa3.05□□□□□ -1.92
UBC9YDL064W DBP9Q06218 594 aaKnown RBP3.05□□□□□ -1.92
UBC9YDL064W PML1Q07930 204 aaPredicted RBP3.05□□□□□ -1.92
UBC9YDL064W PEX27Q08580 376 aa3.05□□□□□ -1.92
UBC9YDL064W NAG1Q8TGN9 163 aa3.05□□□□□ -1.92
UBC9YDL064W YOR338WQ99326 363 aa3.05□□□□□ -1.92
UBC9YDL064W RPB5P20434 215 aa3.04□□□□□ -1.92
UBC9YDL064W OPI1P21957 404 aa3.04□□□□□ -1.92
UBC9YDL064W DBR1P24309 405 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms