RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RCO1	Q04779	684 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SDO1	Q07953	250 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	SKM1	Q12469	655 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	AGC1	Q12482	902 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	CBP1	P07252	654 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	MRPL8	P22353	238 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	PDC2	P32896	925 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	RMA1	P36001	430 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	DOA1	P36037	715 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	PPE1	P38796	400 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	RIP-Chip
PIM1	YBL022C	SHU2	P38957	223 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	DOT6	P40059	670 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	FIS1	P40515	155 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	CAK1	P43568	368 aa	Predicted RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	STE24	P47154	453 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SNN1	P48232	102 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	CUL3	P53202	744 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	YKR011C	Q02209	353 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	RPL6A	Q02326	176 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	UGO1	Q03327	502 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SCP1	Q08873	200 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	YLL056C	Q12177	298 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	YER152C	P10356	443 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	GRX1	P25373	110 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	BUB2	P26448	306 aa	Predicted RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	ALY1	P36117	915 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	ALG8	P40351	577 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	MAF1	P41910	395 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	DPB11	P47027	764 aa	Predicted RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	PEX12	Q04370	399 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	UTP21	Q06078	939 aa	Predicted RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	SSK1	Q07084	712 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	YPL260W	Q08977	551 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	CTF3	Q12748	733 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SRD1	P09007	221 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	EPT1	P22140	391 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	YUR1	P26725	428 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PMT1	P33775	817 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	SOL2	P37262	315 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PTC7	P38797	343 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	GET2	P40056	285 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	LSM4	P40070	187 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	RRT5	P43607	289 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MNP1	P53163	194 aa	Predicted RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	KAP120	Q02932	1032 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	GAD1	Q04792	585 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	YPR127W	Q06494	345 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MED7	Q08278	222 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	YOR238W	Q08634	303 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	ATG41	Q12048	136 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MDY2	Q12285	212 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PCC1	Q3E833	88 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PET9	P18239	318 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	FUR1	P18562	216 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	MRPL44	P19956	98 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PRE8	P23639	250 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
PIM1	YBL022C	VMA5	P31412	392 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	SIP1	P32578	815 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	ASH1	P34233	588 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	TCM62	P38228	572 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	PRS3	P38689	320 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	YER158C	P40095	573 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	SLM1	P40485	686 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	PKP1	P40530	394 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	IME4	P41833	600 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	YJL171C	P46992	396 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MPS3	P47069	682 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	YMR034C	Q05131	434 aa	Predicted RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	MFG1	Q07684	458 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	BUD20	Q08004	166 aa	Predicted RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	COQ10	Q08058	207 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MSC6	Q08818	692 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
PIM1	YBL022C	SFM1	Q12314	213 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	RKM5	Q12367	367 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	MMP1	Q12372	583 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	TIF6	Q12522	245 aa	Known RBP	3.87	□□□□□ -1.79
PIM1	YBL022C	YCL001W-B	Q96VH2	84 aa		3.87	□□□□□ -1.79
PIM1	YBL022C	AI1	P03875	834 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	PRE9	P23638	258 aa	Known RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	RSC6	P25632	483 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	YCR090C	P25654	182 aa	Known RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	RNP1	P32385	249 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	SPO23	P33757	523 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	PCM1	P38628	557 aa	Known RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	CRP1	P38845	465 aa	Known RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	XDJ1	P39102	459 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	TAD2	P47058	250 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	YJR141W	P47172	347 aa	Predicted RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	YGL185C	P53100	379 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	BUD9	P53226	547 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	YPL062W	Q02781	134 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	HAS1	Q03532	505 aa	Known RBP	3.86	□□□□□ -1.79
PIM1	YBL022C	RIF2	Q06208	395 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	CRN1	Q06440	651 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	YOL131W	Q08270	108 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	RAD28	Q12021	506 aa		3.86	□□□□□ -1.79
PIM1	YBL022C	FRS1	P15624	595 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms