RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPB5P20434 215 aa7.82□□□□□ -1.16
SRP54YPR088C YIM1P28625 365 aa7.82□□□□□ -1.16
SRP54YPR088C VPH2P32341 215 aa7.82□□□□□ -1.16
SRP54YPR088C SSE2P32590 693 aaKnown RBP7.82□□□□□ -1.16
SRP54YPR088C GDH2P33327 1092 aaKnown RBP7.82□□□□□ -1.16
SRP54YPR088C YAR028WP39548 234 aa7.82□□□□□ -1.16
SRP54YPR088C TED1P40533 473 aa7.82□□□□□ -1.16
SRP54YPR088C HOS2P53096 452 aaPredicted RBP7.82□□□□□ -1.16
SRP54YPR088C CDH1P53197 566 aa7.82□□□□□ -1.16
SRP54YPR088C YPL107WQ02873 248 aa7.82□□□□□ -1.16
SRP54YPR088C RIM13Q03792 727 aa7.82□□□□□ -1.16
SRP54YPR088C SWA2Q06677 668 aa7.82□□□□□ -1.16
SRP54YPR088C YEH1Q07804 573 aa7.82□□□□□ -1.16
SRP54YPR088C DCI1Q08558 271 aa7.82□□□□□ -1.16
SRP54YPR088C FDH1Q08911 376 aa7.82□□□□□ -1.16
SRP54YPR088C BSC1Q12140 328 aa7.82□□□□□ -1.16
SRP54YPR088C SKM1Q12469 655 aa7.82□□□□□ -1.16
SRP54YPR088C NKP1Q12493 238 aa7.82□□□□□ -1.16
SRP54YPR088C SEC39Q12745 709 aa7.82□□□□□ -1.16
SRP54YPR088C KSS1P14681 368 aa7.81□□□□□ -1.16
SRP54YPR088C MRPS28P21771 286 aa7.81□□□□□ -1.16
SRP54YPR088C CTR86P25355 563 aa7.81□□□□□ -1.16
SRP54YPR088C IMG1P25626 169 aa7.81□□□□□ -1.16
SRP54YPR088C NUF2P33895 451 aa7.81□□□□□ -1.16
SRP54YPR088C SPC42P36094 363 aa7.81□□□□□ -1.16
SRP54YPR088C BIG1P38813 335 aa7.81□□□□□ -1.16
SRP54YPR088C TDA11P38854 504 aa7.81□□□□□ -1.16
SRP54YPR088C CFD1P40558 293 aa7.81□□□□□ -1.16
SRP54YPR088C EMC2P47133 292 aaKnown RBP7.81□□□□□ -1.16
SRP54YPR088C STE24P47154 453 aa7.81□□□□□ -1.16
SRP54YPR088C SPO19Q03029 223 aa7.81□□□□□ -1.16
SRP54YPR088C KRE28Q04431 385 aa7.81□□□□□ -1.16
SRP54YPR088C ARO10Q06408 635 aa7.81□□□□□ -1.16
SRP54YPR088C YOR019WQ99248 730 aa7.81□□□□□ -1.16
SRP54YPR088C MSN2P33748 704 aa7.81□□□□□ -1.16
SRP54YPR088C TIF3P34167 436 aaKnown RBP7.81□□□□□ -1.16
SRP54YPR088C TEF4P36008 412 aaKnown RBP7.81□□□□□ -1.16
SRP54YPR088C TUL1P36096 758 aa7.81□□□□□ -1.16
SRP54YPR088C YFL066CP43538 392 aa7.81□□□□□ -1.16
SRP54YPR088C CAK1P43568 368 aaPredicted RBP7.81□□□□□ -1.16
SRP54YPR088C YMR099CQ03161 297 aaKnown RBP7.81□□□□□ -1.16
SRP54YPR088C RSF1Q05043 376 aa7.81□□□□□ -1.16
SRP54YPR088C BSC6Q08280 497 aa7.81□□□□□ -1.16
SRP54YPR088C DBP10Q12389 995 aaKnown RBP7.81□□□□□ -1.16
SRP54YPR088C MRX4Q12467 430 aa7.81□□□□□ -1.16
SRP54YPR088C ECM8P38246 354 aa7.8□□□□□ -1.16
SRP54YPR088C YBR238CP38330 731 aaKnown RBP7.8□□□□□ -1.16
SRP54YPR088C SPO73P40031 143 aa7.8□□□□□ -1.16
SRP54YPR088C RPS12P48589 143 aaKnown RBP7.8□□□□□ -1.16
SRP54YPR088C PRM8P53174 237 aa7.8□□□□□ -1.16
SRP54YPR088C YGR012WP53206 393 aa7.8□□□□□ -1.16
SRP54YPR088C TWF1P53250 332 aa7.8□□□□□ -1.16
SRP54YPR088C DAM1P53267 343 aa7.8□□□□□ -1.16
SRP54YPR088C SWP1Q02795 286 aa7.8□□□□□ -1.16
SRP54YPR088C ELP4Q02884 456 aaKnown RBP7.8□□□□□ -1.16
SRP54YPR088C RAD30Q04049 632 aa7.8□□□□□ -1.16
SRP54YPR088C YLR456WQ06199 204 aa7.8□□□□□ -1.16
SRP54YPR088C ATG17Q06410 417 aa7.8□□□□□ -1.16
SRP54YPR088C MRPL32P25348 183 aa7.79□□□□□ -1.16
SRP54YPR088C CMK1P27466 446 aaKnown RBP7.79□□□□□ -1.16
SRP54YPR088C IDH1P28834 360 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
SRP54YPR088C GSH1P32477 678 aa7.79□□□□□ -1.16
SRP54YPR088C RPN2P32565 945 aaKnown RBP7.79□□□□□ -1.16
SRP54YPR088C YME2P32843 850 aa7.79□□□□□ -1.16
SRP54YPR088C PET112P33893 541 aa7.79□□□□□ -1.16
SRP54YPR088C LHS1P36016 881 aa7.79□□□□□ -1.16
SRP54YPR088C COG3P40094 801 aa7.79□□□□□ -1.16
SRP54YPR088C SNM1P40993 198 aa7.79□□□□□ -1.16
SRP54YPR088C ALK1P43633 760 aaKnown RBP7.79□□□□□ -1.16
SRP54YPR088C GLE1Q12315 538 aa7.79□□□□□ -1.16
SRP54YPR088C SEC2P17065 759 aa7.78□□□□□ -1.16
SRP54YPR088C PET9P18239 318 aaKnown RBP7.78□□□□□ -1.16
SRP54YPR088C AUR1P36107 401 aaPredicted RBP7.78□□□□□ -1.16
SRP54YPR088C SIC1P38634 284 aa7.78□□□□□ -1.16
SRP54YPR088C RCY1P39531 840 aa7.78□□□□□ -1.16
SRP54YPR088C MET28P40573 187 aa7.78□□□□□ -1.16
SRP54YPR088C TIM54P47045 478 aa7.78□□□□□ -1.16
SRP54YPR088C AAD10P47182 288 aa7.78□□□□□ -1.16
SRP54YPR088C ERG13P54839 491 aaKnown RBP7.78□□□□□ -1.16
SRP54YPR088C SIZ1Q04195 904 aa7.78□□□□□ -1.16
SRP54YPR088C YPL066WQ12194 479 aa7.78□□□□□ -1.16
SRP54YPR088C YLR126CQ12288 251 aa7.78□□□□□ -1.16
SRP54YPR088C MHF1Q3E835 90 aa7.78□□□□□ -1.16
SRP54YPR088C CAN1P04817 590 aa7.78□□□□□ -1.16
SRP54YPR088C TPK3P05986 398 aa7.78□□□□□ -1.16
SRP54YPR088C THR1P17423 357 aaKnown RBP7.78□□□□□ -1.16
SRP54YPR088C AAC3P18238 307 aa7.78□□□□□ -1.16
SRP54YPR088C RRP7P25368 297 aaPredicted RBP7.78□□□□□ -1.16
SRP54YPR088C RHB1P25378 209 aa7.78□□□□□ -1.16
SRP54YPR088C MRPL15P36523 253 aa7.78□□□□□ -1.16
SRP54YPR088C GIP2P40036 548 aa7.78□□□□□ -1.16
SRP54YPR088C MSS2P40990 351 aa7.78□□□□□ -1.16
SRP54YPR088C BIT61P47041 543 aa7.78□□□□□ -1.16
SRP54YPR088C MTQ1P53944 314 aa7.78□□□□□ -1.16
SRP54YPR088C COG5P53951 403 aa7.78□□□□□ -1.16
SRP54YPR088C TMA20P89886 181 aaPredicted RBP7.78□□□□□ -1.16
SRP54YPR088C CBS1P14066 229 aa7.77□□□□□ -1.17
SRP54YPR088C APN1P22936 367 aa7.77□□□□□ -1.17
SRP54YPR088C CNA1P23287 553 aa7.77□□□□□ -1.17
SRP54YPR088C YCR006CP25350 157 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms