RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	TRM82	Q03774	444 aa		5.74	□□□□□ -1.49
WHI2	YOR043W	YDR179W-A	Q03983	463 aa		5.74	□□□□□ -1.49
WHI2	YOR043W	SMP3	Q04174	516 aa		5.74	□□□□□ -1.49
WHI2	YOR043W	ATG38	Q05789	226 aa	Known RBP	5.74	□□□□□ -1.49
WHI2	YOR043W	RPN8	Q08723	338 aa	Known RBP	5.74	□□□□□ -1.49
WHI2	YOR043W	GLE1	Q12315	538 aa		5.74	□□□□□ -1.49
WHI2	YOR043W	RIB3	Q99258	208 aa		5.74	□□□□□ -1.49
WHI2	YOR043W	HTS1	P07263	546 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	FUR1	P18562	216 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	RPS1B	P23248	255 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	PUP1	P25043	261 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	RPL5	P26321	297 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	GSH1	P32477	678 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	FMP46	P36141	133 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	ZTA1	P38230	334 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	ECM8	P38246	354 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	ATG14	P38270	344 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	EHT1	P38295	451 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	COG3	P40094	801 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	LRO1	P40345	661 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	NEO1	P40527	1151 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	MRPS18	P42847	217 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	CAK1	P43568	368 aa	Predicted RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	CIS3	P47001	227 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	HXT16	P47185	567 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	FHN1	P53279	174 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	ESF2	P53743	316 aa	Known RBP	5.73	□□□□□ -1.49
WHI2	YOR043W	HXT15	P54854	567 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	SWP1	Q02795	286 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	YML096W	Q04489	525 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	APC4	Q04601	652 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	BOP2	Q06150	570 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	PUS9	Q12069	462 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	YLR126C	Q12288	251 aa		5.73	□□□□□ -1.49
WHI2	YOR043W	PUT2	P07275	575 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	GAL7	P08431	366 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	CBS2	P14905	389 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	DBP3	P20447	523 aa	Known RBP	5.72	□□□□□ -1.49
WHI2	YOR043W	HCM1	P25364	564 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	RHB1	P25378	209 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	RPC82	P32349	654 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	NTH1	P32356	751 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	MKK1	P32490	508 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
WHI2	YOR043W	SFA1	P32771	386 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	HCS1	P34243	683 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	MTG2	P38860	518 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	EGD2	P38879	174 aa	Known RBP	5.72	□□□□□ -1.49
WHI2	YOR043W	PCF11	P39081	626 aa	Predicted RBP	5.72	□□□□□ -1.49
WHI2	YOR043W	AVT6	P40074	448 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	YGR201C	P42936	225 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	PRM8	P53174	237 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	YGR079W	P53249	370 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	DAM1	P53267	343 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	EGD1	Q02642	157 aa	Known RBP	5.72	□□□□□ -1.49
WHI2	YOR043W	RSN1	Q03516	953 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	KRE28	Q04431	385 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	THI73	Q07904	523 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	DCI1	Q08558	271 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	MHF1	Q3E835	90 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	TSC13	Q99190	310 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	PNO1	Q99216	274 aa	Known RBP	5.72	□□□□□ -1.49
WHI2	YOR043W	VCX1	Q99385	411 aa		5.72	□□□□□ -1.49
WHI2	YOR043W	SLH1	P53327	1967 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	TPK3	P05986	398 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	ZWF1	P11412	505 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	MGR1	P25573	417 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	RPS5	P26783	225 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	YIM1	P28625	365 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	PRP21	P32524	280 aa	Predicted RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	RPN2	P32565	945 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	NUF2	P33895	451 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	YKR015C	P36111	568 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	OMA1	P36163	345 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	AHP1	P38013	176 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	YHR112C	P38716	378 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	RPL10	P41805	221 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	ART5	P53244	586 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	YPL107W	Q02873	248 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	YML053C	Q04978	212 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	RQC1	Q05468	723 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	XYL2	Q07993	356 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	MMT2	Q08970	484 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	DIN7	Q12086	430 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	YOL107W	Q12239	342 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	SFM1	Q12314	213 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	SKS1	Q12505	502 aa		5.71	□□□□□ -1.49
WHI2	YOR043W	RRP12	Q12754	1228 aa	Known RBP	5.71	□□□□□ -1.49
WHI2	YOR043W	PET9	P18239	318 aa	Known RBP	5.71	□□□□□ -1.5
WHI2	YOR043W	VPS33	P20795	691 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	NPR1	P22211	790 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	RNQ1	P25367	405 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	PRO1	P32264	428 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	CDC13	P32797	924 aa	Known RBP	5.71	□□□□□ -1.5
WHI2	YOR043W	SUI1	P32911	108 aa	Known RBP	5.71	□□□□□ -1.5
WHI2	YOR043W	SKN1	P33336	771 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	LOT5	P34234	306 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	OAR1	P35731	278 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	TUL1	P36096	758 aa		5.71	□□□□□ -1.5
WHI2	YOR043W	GOS1	P38736	223 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms