RNA–Protein interactions for RNA: YNR051C

BRE5, Transcript of Ubiquitin protease cofactor, yeast

Gene BRE5, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE5	YNR051C	HHF1	P02309	103 aa	Known RBP	2.72	□□□□□ -1.97
BRE5	YNR051C	OPI3	P05375	206 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	DEG1	P31115	442 aa	Known RBP	2.72	□□□□□ -1.97
BRE5	YNR051C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
BRE5	YNR051C	YBL059W	P34224	193 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	DOA1	P36037	715 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	YBR137W	P38276	179 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	YSW1	P38280	609 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	CAJ1	P39101	391 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	CHS6	P40955	746 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	TOS3	P43637	560 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	ATP22	P50273	684 aa	Predicted RBP	2.72	□□□□□ -1.97
BRE5	YNR051C	TOF1	P53840	1238 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	IMP4	P53941	290 aa	Known RBP	2.72	□□□□□ -1.97
BRE5	YNR051C	YTH1	Q06102	208 aa	Predicted RBP	2.72	□□□□□ -1.97
BRE5	YNR051C	ECM7	Q06200	448 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	IPK1	Q06667	281 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	YFH1	Q07540	174 aa		2.72	□□□□□ -1.97
BRE5	YNR051C	YBL028C	P38202	106 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	PTH1	P38876	190 aa	Known RBP	2.71	□□□□□ -1.98
BRE5	YNR051C	CCT4	P39078	528 aa	Known RBP	2.71	□□□□□ -1.98
BRE5	YNR051C	JLP2	P40206	208 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	ATM1	P40416	690 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	YGR016W	P53209	190 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	RTT102	P53330	157 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	HER2	Q03557	464 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	AAD15	Q08361	143 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	RAX1	Q08760	435 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	RNH203	Q12338	110 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	YRM1	Q12340	786 aa		2.71	□□□□□ -1.98
BRE5	YNR051C	RPL12A	P0CX53	165 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	RPL12B	P0CX54	165 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	ARF1	P11076	181 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	SPT15	P13393	240 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	MNS1	P32906	549 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	YKL097C	P34245	136 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	SPP381	P38282	291 aa	Predicted RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	COX14	P39103	70 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	BOR1	P53838	576 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	RIP-Chip
BRE5	YNR051C	CWC25	P53854	179 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	SPR6	Q01684	191 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	ELP3	Q02908	557 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	PRP3	Q03338	469 aa	Predicted RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	URC2	Q04411	772 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	CUE5	Q08412	411 aa	Known RBP	2.7	□□□□□ -1.98
BRE5	YNR051C	YOR387C	Q08910	206 aa		2.7	□□□□□ -1.98
BRE5	YNR051C	TRP1	P00912	224 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	TPK3	P05986	398 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	CBS2	P14905	389 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	DAP2	P18962	818 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	SKT5	P34226	696 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	SIM1	P40472	476 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	YIL029C	P40538	142 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	STE24	P47154	453 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	RRP46	P53256	223 aa	Predicted RBP	2.69	□□□□□ -1.98
BRE5	YNR051C	YGR117C	P53270	476 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	BTN2	P53286	410 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	ALF1	P53904	254 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	NUP116	Q02630	1113 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	POM152	P39685	1337 aa		2.69	□□□□□ -1.98
BRE5	YNR051C	CAP2	P13517	287 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	NOP1	P15646	327 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	UBA1	P22515	1024 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	EXG1	P23776	448 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	DAL2	P25335	343 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
BRE5	YNR051C	FAA1	P30624	700 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	SMI1	P32566	505 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	TOA1	P32773	286 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	ADH5	P38113	351 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	YDR286C	Q05530	114 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	ASA1	Q06822	443 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	ERV2	Q12284	196 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	HIF1	Q12373	385 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	CYC3	P06182	269 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	NAM2	P11325	894 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	SCH9	P11792	824 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	NAM9	P27929	486 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	ARO2	P28777	376 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	YEF1	P32622	495 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	YBR139W	P38109	508 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	SIF2	P38262	535 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	PMT5	P52867	743 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	MTM1	P53320	366 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	MTQ1	P53944	314 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	DBP9	Q06218	594 aa	Known RBP	2.68	□□□□□ -1.98
BRE5	YNR051C	LDS2	Q08218	356 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	YOP1	Q12402	180 aa		2.68	□□□□□ -1.98
BRE5	YNR051C	PET123	P17558	318 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	POP5	P28005	173 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	ANP1	P32629	500 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	SPT10	P35208	640 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	SBE22	P38814	852 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	YHR177W	P38867	453 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	RPA34	P47006	233 aa	Predicted RBP	2.67	□□□□□ -1.98
BRE5	YNR051C	MDE1	P47095	244 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	MRM2	P53123	320 aa		2.67	□□□□□ -1.98
BRE5	YNR051C	TRM112	P53738	135 aa	Predicted RBP	2.67	□□□□□ -1.98
BRE5	YNR051C	YNR068C	P53754	272 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms