RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W PIH1P38768 344 aa6.67□□□□□ -1.34
HDA1YNL021W RRP4P38792 359 aaKnown RBP6.67□□□□□ -1.34
HDA1YNL021W SNT309Q06091 175 aaPredicted RBP6.67□□□□□ -1.34
HDA1YNL021W ECM7Q06200 448 aa6.67□□□□□ -1.34
HDA1YNL021W ARO10Q06408 635 aa6.67□□□□□ -1.34
HDA1YNL021W LEA1Q08963 238 aaPredicted RBP6.67□□□□□ -1.34
HDA1YNL021W RSR1P13856 272 aa6.67□□□□□ -1.34
HDA1YNL021W SOR1P35497 357 aaKnown RBP6.67□□□□□ -1.34
HDA1YNL021W KKQ8P36004 724 aa6.67□□□□□ -1.34
HDA1YNL021W GIM3P53900 129 aa6.67□□□□□ -1.34
HDA1YNL021W ATC1Q04005 294 aa6.67□□□□□ -1.34
HDA1YNL021W EMI2Q04409 500 aaKnown RBP6.67□□□□□ -1.34
HDA1YNL021W URC2Q04411 772 aa6.67□□□□□ -1.34
HDA1YNL021W ECM30Q06673 1274 aa6.67□□□□□ -1.34
HDA1YNL021W SOR2Q07786 357 aa6.67□□□□□ -1.34
HDA1YNL021W PAA1Q12447 191 aaKnown RBP6.67□□□□□ -1.34
HDA1YNL021W AIM45Q12480 344 aaKnown RBP6.67□□□□□ -1.34
HDA1YNL021W CLN3P13365 580 aa6.66□□□□□ -1.34
HDA1YNL021W HXT2P23585 541 aa6.66□□□□□ -1.34
HDA1YNL021W FRE1P32791 686 aa6.66□□□□□ -1.34
HDA1YNL021W BUD2P33314 1104 aa6.66□□□□□ -1.34
HDA1YNL021W YHR122WP38829 231 aa6.66□□□□□ -1.34
HDA1YNL021W RTT107P38850 1070 aa6.66□□□□□ -1.34
HDA1YNL021W END3P39013 349 aa6.66□□□□□ -1.34
HDA1YNL021W GIS3Q12418 502 aa6.66□□□□□ -1.34
HDA1YNL021W YPR089WO13585 888 aa6.65□□□□□ -1.34
HDA1YNL021W PGK1P00560 416 aaKnown RBP6.65□□□□□ -1.34
HDA1YNL021W TKL1P23254 680 aaKnown RBP6.65□□□□□ -1.34
HDA1YNL021W EMP70P32802 667 aa6.65□□□□□ -1.34
HDA1YNL021W DBP8P38719 431 aa6.65□□□□□ -1.34
HDA1YNL021W GAT2P40209 560 aa6.65□□□□□ -1.34
HDA1YNL021W PMT6P42934 759 aa6.65□□□□□ -1.34
HDA1YNL021W TRF5P48561 642 aaKnown RBP6.65□□□□□ -1.34
HDA1YNL021W RIM8P53179 542 aa6.65□□□□□ -1.34
HDA1YNL021W YGR035CP53222 116 aa6.65□□□□□ -1.34
HDA1YNL021W YGR126WP53274 230 aa6.65□□□□□ -1.34
HDA1YNL021W YOR365CQ08844 703 aa6.65□□□□□ -1.34
HDA1YNL021W MSS116P15424 664 aaKnown RBP6.65□□□□□ -1.35
HDA1YNL021W VPS3P23643 1011 aa6.65□□□□□ -1.35
HDA1YNL021W GBP2P25555 427 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35 RIP-Chip
HDA1YNL021W DEP1P31385 405 aa6.65□□□□□ -1.35
HDA1YNL021W ARO4P32449 370 aaKnown RBP6.65□□□□□ -1.35
HDA1YNL021W RPC25P35718 212 aa6.65□□□□□ -1.35
HDA1YNL021W MCR1P36060 302 aaKnown RBP6.65□□□□□ -1.35
HDA1YNL021W YKR073CP36153 106 aa6.65□□□□□ -1.35
HDA1YNL021W SYG1P40528 902 aa6.65□□□□□ -1.35
HDA1YNL021W MSS2P40990 351 aa6.65□□□□□ -1.35
HDA1YNL021W TOS3P43637 560 aa6.65□□□□□ -1.35
HDA1YNL021W YOL107WQ12239 342 aa6.65□□□□□ -1.35
HDA1YNL021W GLE1Q12315 538 aa6.65□□□□□ -1.35
HDA1YNL021W RMD5Q12508 421 aa6.65□□□□□ -1.35
HDA1YNL021W YBL111CQ3E7Y5 667 aa6.65□□□□□ -1.35
HDA1YNL021W YUR1P26725 428 aa6.64□□□□□ -1.35
HDA1YNL021W RAD23P32628 398 aaKnown RBP6.64□□□□□ -1.35
HDA1YNL021W TAE1P38340 232 aa6.64□□□□□ -1.35
HDA1YNL021W MIT1P40002 666 aa6.64□□□□□ -1.35
HDA1YNL021W ATM1P40416 690 aa6.64□□□□□ -1.35
HDA1YNL021W FIS1P40515 155 aa6.64□□□□□ -1.35
HDA1YNL021W YGL114WP53134 725 aa6.64□□□□□ -1.35
HDA1YNL021W BCP1Q06338 283 aa6.64□□□□□ -1.35
HDA1YNL021W FMP16Q12497 93 aa6.64□□□□□ -1.35
HDA1YNL021W DCP1Q12517 231 aaPredicted RBP6.64□□□□□ -1.35
HDA1YNL021W YER145C-AA0A023PYF4 145 aa6.64□□□□□ -1.35
HDA1YNL021W RAD52P06778 471 aaKnown RBP6.64□□□□□ -1.35
HDA1YNL021W ATP11P32453 318 aa6.64□□□□□ -1.35
HDA1YNL021W UTR4P32626 227 aa6.64□□□□□ -1.35
HDA1YNL021W NRP1P32770 719 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
HDA1YNL021W SPC97P38863 823 aa6.64□□□□□ -1.35
HDA1YNL021W ALP1P38971 573 aa6.64□□□□□ -1.35
HDA1YNL021W YPS6P40583 537 aa6.64□□□□□ -1.35
HDA1YNL021W YFL015CP43578 164 aa6.64□□□□□ -1.35
HDA1YNL021W PHO86P46956 311 aa6.64□□□□□ -1.35
HDA1YNL021W NBP1P52919 319 aaPredicted RBP6.64□□□□□ -1.35
HDA1YNL021W VPS60Q03390 229 aa6.64□□□□□ -1.35
HDA1YNL021W THP1Q08231 455 aa6.64□□□□□ -1.35
HDA1YNL021W RRP12Q12754 1228 aaKnown RBP6.64□□□□□ -1.35
HDA1YNL021W WHI2P12611 486 aa6.63□□□□□ -1.35
HDA1YNL021W TCP1P12612 559 aaKnown RBP6.63□□□□□ -1.35
HDA1YNL021W YPS1P32329 569 aa6.63□□□□□ -1.35
HDA1YNL021W MSN2P33748 704 aa6.63□□□□□ -1.35
HDA1YNL021W SHP1P34223 423 aa6.63□□□□□ -1.35
HDA1YNL021W PET100P38958 111 aa6.63□□□□□ -1.35
HDA1YNL021W SDS3P40505 327 aa6.63□□□□□ -1.35
HDA1YNL021W SAS2P40963 338 aa6.63□□□□□ -1.35
HDA1YNL021W SPG5P42933 373 aa6.63□□□□□ -1.35
HDA1YNL021W EMC2P47133 292 aaKnown RBP6.63□□□□□ -1.35
HDA1YNL021W MRK1P50873 501 aa6.63□□□□□ -1.35
HDA1YNL021W SPT20P50875 604 aa6.63□□□□□ -1.35
HDA1YNL021W ZPR1P53303 486 aaKnown RBP6.63□□□□□ -1.35
HDA1YNL021W SRL4Q03085 281 aa6.63□□□□□ -1.35
HDA1YNL021W SUT2Q12286 268 aa6.63□□□□□ -1.35
HDA1YNL021W ERG11P10614 530 aa6.62□□□□□ -1.35
HDA1YNL021W SPO12P17123 173 aa6.62□□□□□ -1.35
HDA1YNL021W CLB2P24869 491 aa6.62□□□□□ -1.35
HDA1YNL021W MGM101P32787 269 aaKnown RBP6.62□□□□□ -1.35
HDA1YNL021W RRN10P38204 145 aa6.62□□□□□ -1.35
HDA1YNL021W SBE22P38814 852 aa6.62□□□□□ -1.35
HDA1YNL021W SHQ1P40486 507 aaPredicted RBP6.62□□□□□ -1.35
HDA1YNL021W LYS20P48570 428 aaKnown RBP6.62□□□□□ -1.35
HDA1YNL021W VOA1P53262 265 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 129.9 ms