RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C CEX1Q12453 761 aa4.03□□□□□ -1.76
BLS1YLR408C DST1P07273 309 aa4.02□□□□□ -1.77
BLS1YLR408C LCB2P40970 561 aa4.02□□□□□ -1.77
BLS1YLR408C MDE1P47095 244 aa4.02□□□□□ -1.77
BLS1YLR408C SDT1P53078 280 aa4.02□□□□□ -1.77
BLS1YLR408C PIB2P53191 635 aa4.02□□□□□ -1.77
BLS1YLR408C COS1P53822 381 aa4.02□□□□□ -1.77
BLS1YLR408C PRP3Q03338 469 aaPredicted RBP4.02□□□□□ -1.77
BLS1YLR408C PAL1Q05518 499 aaKnown RBP4.02□□□□□ -1.77
BLS1YLR408C MDM36Q06820 579 aa4.02□□□□□ -1.77
BLS1YLR408C EXG1P23776 448 aaKnown RBP4.01□□□□□ -1.77
BLS1YLR408C MNE1P24720 663 aa4.01□□□□□ -1.77
BLS1YLR408C SPR1P32603 445 aa4.01□□□□□ -1.77
BLS1YLR408C SKN1P33336 771 aa4.01□□□□□ -1.77
BLS1YLR408C PEX25Q02969 394 aa4.01□□□□□ -1.77
BLS1YLR408C NDE2Q07500 545 aa4.01□□□□□ -1.77
BLS1YLR408C IRC25Q07951 179 aa4.01□□□□□ -1.77
BLS1YLR408C RBD2Q12270 262 aa4.01□□□□□ -1.77
BLS1YLR408C NCA2Q12374 616 aa4.01□□□□□ -1.77
BLS1YLR408C PAR32Q12515 295 aaKnown RBP4.01□□□□□ -1.77
BLS1YLR408C CDC21P06785 304 aa4□□□□□ -1.77
BLS1YLR408C CAP2P13517 287 aa4□□□□□ -1.77
BLS1YLR408C EFM4P40516 257 aa4□□□□□ -1.77
BLS1YLR408C YJL055WP47044 245 aa4□□□□□ -1.77
BLS1YLR408C MTQ1P53944 314 aa4□□□□□ -1.77
BLS1YLR408C SXM1Q04175 944 aaKnown RBP4□□□□□ -1.77
BLS1YLR408C MHR1Q06630 226 aa4□□□□□ -1.77
BLS1YLR408C RNH203Q12338 110 aa4□□□□□ -1.77
BLS1YLR408C RVS161P25343 265 aaKnown RBP3.99□□□□□ -1.77
BLS1YLR408C NRP1P32770 719 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
BLS1YLR408C CSE2P33308 149 aa3.99□□□□□ -1.77
BLS1YLR408C YKL097CP34245 136 aa3.99□□□□□ -1.77
BLS1YLR408C QDR3P38227 689 aa3.99□□□□□ -1.77
BLS1YLR408C COX14P39103 70 aa3.99□□□□□ -1.77
BLS1YLR408C GDI1P39958 451 aaKnown RBP3.99□□□□□ -1.77
BLS1YLR408C YIL029CP40538 142 aa3.99□□□□□ -1.77
BLS1YLR408C YJR085CP47131 105 aaKnown RBP3.99□□□□□ -1.77
BLS1YLR408C STE24P47154 453 aa3.99□□□□□ -1.77
BLS1YLR408C NUP116Q02630 1113 aa3.99□□□□□ -1.77
BLS1YLR408C YDR541CQ03049 344 aa3.99□□□□□ -1.77
BLS1YLR408C PLP2Q12017 286 aa3.99□□□□□ -1.77
BLS1YLR408C YEF1P32622 495 aa3.98□□□□□ -1.77
BLS1YLR408C MDL1P33310 695 aa3.98□□□□□ -1.77
BLS1YLR408C MRPL4P36517 319 aa3.98□□□□□ -1.77
BLS1YLR408C MLH1P38920 769 aa3.98□□□□□ -1.77
BLS1YLR408C MMF1P40185 145 aaKnown RBP3.98□□□□□ -1.77
BLS1YLR408C MRM2P53123 320 aa3.98□□□□□ -1.77
BLS1YLR408C YGR117CP53270 476 aa3.98□□□□□ -1.77
BLS1YLR408C YLR152CP54072 576 aa3.98□□□□□ -1.77
BLS1YLR408C YMR027WQ04371 470 aa3.98□□□□□ -1.77
BLS1YLR408C WTM1Q12363 437 aaKnown RBP3.98□□□□□ -1.77
BLS1YLR408C HSP82P02829 709 aaKnown RBP3.97□□□□□ -1.77
BLS1YLR408C PAB1P04147 577 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
BLS1YLR408C PDE2P06776 526 aa3.97□□□□□ -1.77
BLS1YLR408C ATP1P07251 545 aaKnown RBP3.97□□□□□ -1.77
BLS1YLR408C RPL12AP0CX53 165 aaKnown RBP3.97□□□□□ -1.77
BLS1YLR408C RPL12BP0CX54 165 aa3.97□□□□□ -1.77
BLS1YLR408C RPB5P20434 215 aa3.97□□□□□ -1.77
BLS1YLR408C RRP7P25368 297 aaPredicted RBP3.97□□□□□ -1.77
BLS1YLR408C PHO91P27514 894 aa3.97□□□□□ -1.77
BLS1YLR408C JEM1P40358 645 aa3.97□□□□□ -1.77
BLS1YLR408C PAC11P40960 533 aa3.97□□□□□ -1.77
BLS1YLR408C YGL039WP53183 348 aaKnown RBP3.97□□□□□ -1.77
BLS1YLR408C MEH1Q02205 184 aa3.97□□□□□ -1.77
BLS1YLR408C URC2Q04411 772 aa3.97□□□□□ -1.77
BLS1YLR408C NOP6Q07623 225 aaKnown RBP3.97□□□□□ -1.77
BLS1YLR408C TMC1Q08422 150 aaPredicted RBP3.97□□□□□ -1.77
BLS1YLR408C YGK3Q12222 375 aaPredicted RBP3.97□□□□□ -1.77
BLS1YLR408C SSC1P0CS90 654 aaKnown RBP3.96□□□□□ -1.78
BLS1YLR408C MSI1P13712 422 aa3.96□□□□□ -1.78
BLS1YLR408C PUP2P32379 260 aa3.96□□□□□ -1.78
BLS1YLR408C DPH5P32469 300 aaPredicted RBP3.96□□□□□ -1.78
BLS1YLR408C TOA2P32774 122 aa3.96□□□□□ -1.78
BLS1YLR408C YSC83P32792 385 aa3.96□□□□□ -1.78
BLS1YLR408C TOS2P50078 622 aa3.96□□□□□ -1.78
BLS1YLR408C PMT5P52867 743 aa3.96□□□□□ -1.78
BLS1YLR408C ROG1P53118 685 aa3.96□□□□□ -1.78
BLS1YLR408C ECM7Q06200 448 aa3.96□□□□□ -1.78
BLS1YLR408C CUE5Q08412 411 aaKnown RBP3.96□□□□□ -1.78
BLS1YLR408C POM152P39685 1337 aa3.95□□□□□ -1.78
BLS1YLR408C HXT1P32465 570 aa3.95□□□□□ -1.78
BLS1YLR408C SKT5P34226 696 aa3.95□□□□□ -1.78
BLS1YLR408C YHK8P38776 514 aa3.95□□□□□ -1.78
BLS1YLR408C MLC1P53141 149 aa3.95□□□□□ -1.78
BLS1YLR408C RTT102P53330 157 aa3.95□□□□□ -1.78
BLS1YLR408C RRN9P53437 365 aa3.95□□□□□ -1.78
BLS1YLR408C YMR102CQ03177 834 aa3.95□□□□□ -1.78
BLS1YLR408C ADD37Q03233 198 aa3.95□□□□□ -1.78
BLS1YLR408C LOT6Q07923 191 aa3.95□□□□□ -1.78
BLS1YLR408C SMC5Q08204 1093 aa3.95□□□□□ -1.78
BLS1YLR408C JID1Q12350 301 aa3.95□□□□□ -1.78
BLS1YLR408C IZH2Q12442 317 aa3.95□□□□□ -1.78
BLS1YLR408C COX13P32799 129 aa3.94□□□□□ -1.78
BLS1YLR408C PFF1P38244 976 aa3.94□□□□□ -1.78
BLS1YLR408C SEC28P40509 296 aaKnown RBP3.94□□□□□ -1.78
BLS1YLR408C GAB1P41733 394 aa3.94□□□□□ -1.78
BLS1YLR408C ASN2P49090 572 aaKnown RBP3.94□□□□□ -1.78
BLS1YLR408C MST27P53176 234 aa3.94□□□□□ -1.78
BLS1YLR408C SHY1P53266 389 aa3.94□□□□□ -1.78
BLS1YLR408C SPR6Q01684 191 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms