RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	RPL1B	P0CX44	217 aa	Known RBP	2.79	□□□□□ -1.96
TPK3	YKL166C	EXG1	P23776	448 aa	Known RBP	2.79	□□□□□ -1.96
TPK3	YKL166C	ATP3	P38077	311 aa	Known RBP	2.79	□□□□□ -1.96
TPK3	YKL166C	INM1	P38710	295 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	EFM4	P40516	257 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	TOS3	P43637	560 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	MDE1	P47095	244 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	YJR085C	P47131	105 aa	Known RBP	2.79	□□□□□ -1.96
TPK3	YKL166C	PIB2	P53191	635 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	NSE1	Q07913	336 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	NCA2	Q12374	616 aa		2.79	□□□□□ -1.96
TPK3	YKL166C	CAP2	P13517	287 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	RVS161	P25343	265 aa	Known RBP	2.78	□□□□□ -1.96
TPK3	YKL166C	SPR1	P32603	445 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	CSE2	P33308	149 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	SKN1	P33336	771 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	PEX5	P35056	612 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	MRPL4	P36517	319 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	COX14	P39103	70 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	COS1	P53822	381 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	NUP116	Q02630	1113 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	PEX25	Q02969	394 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	NDL1	Q06568	189 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	MHR1	Q06630	226 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	MDM36	Q06820	579 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	NDE2	Q07500	545 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	IRC25	Q07951	179 aa		2.78	□□□□□ -1.96
TPK3	YKL166C	PAR32	Q12515	295 aa	Known RBP	2.78	□□□□□ -1.96
TPK3	YKL166C	MNE1	P24720	663 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
TPK3	YKL166C	YIL029C	P40538	142 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	YJL055W	P47044	245 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	ROG1	P53118	685 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	MRM2	P53123	320 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	MTQ1	P53944	314 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	TMC1	Q08422	150 aa	Predicted RBP	2.77	□□□□□ -1.97
TPK3	YKL166C	RNH203	Q12338	110 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	WTM1	Q12363	437 aa	Known RBP	2.77	□□□□□ -1.97
TPK3	YKL166C	CEX1	Q12453	761 aa		2.77	□□□□□ -1.97
TPK3	YKL166C	PDE2	P06776	526 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	ATP1	P07251	545 aa	Known RBP	2.76	□□□□□ -1.97
TPK3	YKL166C	PHO91	P27514	894 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	QDR3	P38227	689 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	MMF1	P40185	145 aa	Known RBP	2.76	□□□□□ -1.97
TPK3	YKL166C	STE24	P47154	453 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	PMT5	P52867	743 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	YLR152C	P54072	576 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	MEH1	Q02205	184 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	PRP3	Q03338	469 aa	Predicted RBP	2.76	□□□□□ -1.97
TPK3	YKL166C	SXM1	Q04175	944 aa	Known RBP	2.76	□□□□□ -1.97
TPK3	YKL166C	YMR027W	Q04371	470 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	CUE5	Q08412	411 aa	Known RBP	2.76	□□□□□ -1.97
TPK3	YKL166C	PLP2	Q12017	286 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	AHC1	Q12433	566 aa		2.76	□□□□□ -1.97
TPK3	YKL166C	RPL12A	P0CX53	165 aa	Known RBP	2.75	□□□□□ -1.97
TPK3	YKL166C	RPL12B	P0CX54	165 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	NAM2	P11325	894 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	MSI1	P13712	422 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	RRP7	P25368	297 aa	Predicted RBP	2.75	□□□□□ -1.97
TPK3	YKL166C	DPH5	P32469	300 aa	Predicted RBP	2.75	□□□□□ -1.97
TPK3	YKL166C	YEF1	P32622	495 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	YSC83	P32792	385 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	MDL1	P33310	695 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	YHR131C	P38835	850 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	MLH1	P38920	769 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	TOS2	P50078	622 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	YDR541C	Q03049	344 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	ADD37	Q03233	198 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	ECM7	Q06200	448 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	YGK3	Q12222	375 aa	Predicted RBP	2.75	□□□□□ -1.97
TPK3	YKL166C	IZH2	Q12442	317 aa		2.75	□□□□□ -1.97
TPK3	YKL166C	POM152	P39685	1337 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
TPK3	YKL166C	OPI3	P05375	206 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	SSC1	P0CS90	654 aa	Known RBP	2.74	□□□□□ -1.97
TPK3	YKL166C	HXT1	P32465	570 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	COX13	P32799	129 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	MRPL10	P36520	322 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	PFF1	P38244	976 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	YHK8	P38776	514 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	GDI1	P39958	451 aa	Known RBP	2.74	□□□□□ -1.97
TPK3	YKL166C	AIM10	P39965	576 aa	Known RBP	2.74	□□□□□ -1.97
TPK3	YKL166C	PAC11	P40960	533 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	TIS11	P47977	285 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	YGL039W	P53183	348 aa	Known RBP	2.74	□□□□□ -1.97
TPK3	YKL166C	SHY1	P53266	389 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	YGR117C	P53270	476 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	SPR6	Q01684	191 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	YMR102C	Q03177	834 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	URC2	Q04411	772 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	RIF2	Q06208	395 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	JID1	Q12350	301 aa		2.74	□□□□□ -1.97
TPK3	YKL166C	RPB5	P20434	215 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	SLM5	P25345	492 aa	Known RBP	2.73	□□□□□ -1.97
TPK3	YKL166C	SKT5	P34226	696 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	JEM1	P40358	645 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	SEC28	P40509	296 aa	Known RBP	2.73	□□□□□ -1.97
TPK3	YKL166C	GAB1	P41733	394 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	LCB3	P47013	409 aa		2.73	□□□□□ -1.97
TPK3	YKL166C	AIM24	P47127	394 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms