RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W SKG6P32900 734 aaPredicted RBP3.54□□□□□ -1.84
UBP12YJL197W AHC1Q12433 566 aa3.54□□□□□ -1.84
UBP12YJL197W PRB1P09232 635 aa3.54□□□□□ -1.84
UBP12YJL197W YCR007CP25354 239 aa3.54□□□□□ -1.84
UBP12YJL197W ICL1P28240 557 aaPredicted RBP3.54□□□□□ -1.84
UBP12YJL197W CYM1P32898 989 aa3.54□□□□□ -1.84
UBP12YJL197W ERV46P39727 415 aa3.54□□□□□ -1.84
UBP12YJL197W LYS12P40495 371 aaKnown RBP3.54□□□□□ -1.84
UBP12YJL197W BIO3P50277 480 aa3.54□□□□□ -1.84
UBP12YJL197W ARP10Q04549 284 aa3.54□□□□□ -1.84
UBP12YJL197W SNT309Q06091 175 aaPredicted RBP3.54□□□□□ -1.84
UBP12YJL197W REX4Q08237 289 aa3.54□□□□□ -1.84
UBP12YJL197W SGT1Q08446 395 aa3.54□□□□□ -1.84
UBP12YJL197W YPT1P01123 206 aaKnown RBP3.54□□□□□ -1.84
UBP12YJL197W GDH1P07262 454 aaKnown RBP3.54□□□□□ -1.84
UBP12YJL197W BAR1P12630 587 aa3.54□□□□□ -1.84
UBP12YJL197W KSS1P14681 368 aa3.54□□□□□ -1.84
UBP12YJL197W CIN8P27895 1000 aa3.54□□□□□ -1.84
UBP12YJL197W BTT1P40314 149 aaPredicted RBP3.54□□□□□ -1.84
UBP12YJL197W SOL4P53315 255 aa3.54□□□□□ -1.84
UBP12YJL197W GPI15P53961 229 aa3.54□□□□□ -1.84
UBP12YJL197W YER145C-AA0A023PYF4 145 aa3.53□□□□□ -1.84
UBP12YJL197W YCR016WP25617 290 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W FMP33P46998 180 aa3.53□□□□□ -1.84
UBP12YJL197W GPI1P53306 609 aa3.53□□□□□ -1.84
UBP12YJL197W BUD32P53323 261 aa3.53□□□□□ -1.84
UBP12YJL197W YIF1P53845 314 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W YDR387CQ04162 555 aa3.53□□□□□ -1.84
UBP12YJL197W ECM7Q06200 448 aa3.53□□□□□ -1.84
UBP12YJL197W GAL4P04386 881 aa3.53□□□□□ -1.84
UBP12YJL197W IMA3P0CW40 589 aa3.53□□□□□ -1.84
UBP12YJL197W IMA4P0CW41 589 aa3.53□□□□□ -1.84
UBP12YJL197W RPB8P20436 146 aa3.53□□□□□ -1.84
UBP12YJL197W RVS161P25343 265 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W HCM1P25364 564 aa3.53□□□□□ -1.84
UBP12YJL197W KRE6P32486 720 aa3.53□□□□□ -1.84
UBP12YJL197W MMF1P40185 145 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W YIL060WP40519 144 aa3.53□□□□□ -1.84
UBP12YJL197W TRF5P48561 642 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W YPL068CQ02749 293 aa3.53□□□□□ -1.84
UBP12YJL197W FMP30Q02883 468 aa3.53□□□□□ -1.84
UBP12YJL197W RSN1Q03516 953 aa3.53□□□□□ -1.84
UBP12YJL197W AIM33Q04516 312 aa3.53□□□□□ -1.84
UBP12YJL197W SSK1Q07084 712 aa3.53□□□□□ -1.84
UBP12YJL197W IMA2Q08295 589 aa3.53□□□□□ -1.84
UBP12YJL197W SKI7Q08491 747 aaPredicted RBP3.53□□□□□ -1.84
UBP12YJL197W RDL1Q12305 139 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W RRP12Q12754 1228 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W MES1P00958 751 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W CLN3P13365 580 aa3.53□□□□□ -1.84
UBP12YJL197W DOA1P36037 715 aa3.53□□□□□ -1.84
UBP12YJL197W YRB2P40517 327 aa3.53□□□□□ -1.84
UBP12YJL197W MRX5P47007 382 aa3.53□□□□□ -1.84
UBP12YJL197W PMT5P52867 743 aa3.53□□□□□ -1.84
UBP12YJL197W BUR2Q05949 395 aa3.53□□□□□ -1.84
UBP12YJL197W GMC2Q06201 188 aa3.53□□□□□ -1.84
UBP12YJL197W SMD2Q06217 110 aaKnown RBP3.53□□□□□ -1.84
UBP12YJL197W CTS2Q06350 511 aa3.53□□□□□ -1.84
UBP12YJL197W LDS2Q08218 356 aa3.53□□□□□ -1.84
UBP12YJL197W BTS1Q12051 335 aa3.53□□□□□ -1.84
UBP12YJL197W PRP16P15938 1071 aaPredicted RBP3.52□□□□□ -1.85
UBP12YJL197W GAS1P22146 559 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W VAM7P32912 316 aa3.52□□□□□ -1.85
UBP12YJL197W SKN1P33336 771 aa3.52□□□□□ -1.85
UBP12YJL197W STV1P37296 890 aa3.52□□□□□ -1.85
UBP12YJL197W APD1P38281 316 aa3.52□□□□□ -1.85
UBP12YJL197W SBE22P38814 852 aa3.52□□□□□ -1.85
UBP12YJL197W COX16P47081 118 aa3.52□□□□□ -1.85
UBP12YJL197W GIS1Q03833 894 aa3.52□□□□□ -1.85
UBP12YJL197W PRP46Q12417 451 aaPredicted RBP3.52□□□□□ -1.85
UBP12YJL197W ATG31Q12421 196 aa3.52□□□□□ -1.85
UBP12YJL197W YPR1Q12458 312 aa3.52□□□□□ -1.85
UBP12YJL197W COX2P00410 251 aa3.52□□□□□ -1.85
UBP12YJL197W ARG80P07249 177 aa3.52□□□□□ -1.85
UBP12YJL197W FRS2P15625 503 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W GPI12P23797 304 aa3.52□□□□□ -1.85
UBP12YJL197W PRO3P32263 286 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W SRB4P32569 687 aa3.52□□□□□ -1.85
UBP12YJL197W GCG1P32656 232 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W MGM101P32787 269 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W AIM29P36154 155 aa3.52□□□□□ -1.85
UBP12YJL197W FET3P38993 636 aa3.52□□□□□ -1.85
UBP12YJL197W SPP2Q02521 185 aa3.52□□□□□ -1.85
UBP12YJL197W COQ11Q05892 277 aa3.52□□□□□ -1.85
UBP12YJL197W SIA1Q12212 622 aa3.52□□□□□ -1.85
UBP12YJL197W SSK22P25390 1331 aaPredicted RBP3.52□□□□□ -1.85
UBP12YJL197W SEC3P33332 1336 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W CKI1P20485 582 aa3.52□□□□□ -1.85
UBP12YJL197W MRPL8P22353 238 aa3.52□□□□□ -1.85
UBP12YJL197W MNS1P32906 549 aa3.52□□□□□ -1.85
UBP12YJL197W MPS1P54199 764 aa3.52□□□□□ -1.85
UBP12YJL197W YPL014WQ02606 381 aa3.52□□□□□ -1.85
UBP12YJL197W RVB1Q03940 463 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W SLF1Q12034 447 aaKnown RBP3.52□□□□□ -1.85
UBP12YJL197W YPR022CQ12139 1133 aa3.52□□□□□ -1.85
UBP12YJL197W RPS16AP0CX51 143 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W RPS16BP0CX52 143 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W POL30P15873 258 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W SAT4P25333 603 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W YKL071WP36086 256 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms