RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	CYS4	P32582	507 aa	Known RBP	3.11	□□□□□ -1.91
VMA7	YGR020C	HEL1	P36113	551 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	ASC1	P38011	319 aa	Known RBP	3.11	□□□□□ -1.91
VMA7	YGR020C	SIM1	P40472	476 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	ZIM17	P42844	174 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	YFR057W	P43625	151 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	TCB2	P48231	1178 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	PRP42	Q03776	544 aa	Known RBP	3.11	□□□□□ -1.91
VMA7	YGR020C	RIF2	Q06208	395 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	AEP3	Q12089	606 aa		3.11	□□□□□ -1.91
VMA7	YGR020C	YGK3	Q12222	375 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA7	YGR020C	CAP2	P13517	287 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	EXG1	P23776	448 aa	Known RBP	3.1	□□□□□ -1.91
VMA7	YGR020C	DBF4	P32325	704 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	MRP21	P38175	177 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	RTC2	P38279	296 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	YER079W	P40052	210 aa	Known RBP	3.1	□□□□□ -1.91
VMA7	YGR020C	SER3	P40054	469 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	TOS3	P43637	560 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	BIR1	P47134	954 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	RTN1	Q04947	295 aa	Known RBP	3.1	□□□□□ -1.91
VMA7	YGR020C	SMF3	Q12078	473 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA7	YGR020C	ISA2	Q12425	185 aa		3.1	□□□□□ -1.91
VMA7	YGR020C	RPB5	P20434	215 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	AAT2	P23542	418 aa	Known RBP	3.09	□□□□□ -1.91
VMA7	YGR020C	OLA1	P38219	394 aa	Known RBP	3.09	□□□□□ -1.91
VMA7	YGR020C	ZTA1	P38230	334 aa	Known RBP	3.09	□□□□□ -1.91
VMA7	YGR020C	MAM33	P40513	266 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	DFG10	P40526	253 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	YLR345W	Q06137	509 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	SMC5	Q08204	1093 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	RUP1	Q12242	671 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	CEX1	Q12453	761 aa		3.09	□□□□□ -1.91
VMA7	YGR020C	DST1	P07273	309 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	PRR1	P28708	518 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	RIM1	P32445	135 aa	Known RBP	3.08	□□□□□ -1.92
VMA7	YGR020C	DPH5	P32469	300 aa	Predicted RBP	3.08	□□□□□ -1.92
VMA7	YGR020C	HAC1	P41546	238 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	LCB3	P47013	409 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	AIM24	P47127	394 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	MST27	P53176	234 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	ALF1	P53904	254 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	YMR102C	Q03177	834 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	AIM32	Q04689	311 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	EAF3	Q12432	401 aa		3.08	□□□□□ -1.92
VMA7	YGR020C	CDC21	P06785	304 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	YKL097C	P34245	136 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	SPT10	P35208	640 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	OXA1	P39952	402 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	MMF1	P40185	145 aa	Known RBP	3.07	□□□□□ -1.92
VMA7	YGR020C	CHS6	P40955	746 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	PIB2	P53191	635 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	YGR111W	P53265	400 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	LIP2	Q06005	328 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	CMS1	Q07897	291 aa	Known RBP	3.07	□□□□□ -1.92
VMA7	YGR020C	LOT6	Q07923	191 aa		3.07	□□□□□ -1.92
VMA7	YGR020C	ATP1	P07251	545 aa	Known RBP	3.06	□□□□□ -1.92
VMA7	YGR020C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
VMA7	YGR020C	HSP104	P31539	908 aa	Known RBP	3.06	□□□□□ -1.92
VMA7	YGR020C	SKN1	P33336	771 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	MID2	P36027	376 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	YHK8	P38776	514 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	STN1	P38960	494 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	EGT2	P42835	1041 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	BNS1	P50084	137 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	CRH1	P53301	507 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	TDA1	Q03533	586 aa		3.06	□□□□□ -1.92
VMA7	YGR020C	POM152	P39685	1337 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	PIS1	P06197	220 aa	Known RBP	3.05	□□□□□ -1.92
VMA7	YGR020C	STP2	P38704	541 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	BAT1	P38891	393 aa	Known RBP	3.05	□□□□□ -1.92
VMA7	YGR020C	FAD1	P38913	306 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	RRP46	P53256	223 aa	Predicted RBP	3.05	□□□□□ -1.92
VMA7	YGR020C	COS1	P53822	381 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	YET2	Q04210	160 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	YLR456W	Q06199	204 aa		3.05	□□□□□ -1.92
VMA7	YGR020C	IES6	P32617	166 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	YEF1	P32622	495 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	COX13	P32799	129 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	INM1	P38710	295 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	ATG18	P43601	500 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	CLD1	P53264	445 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	SPR6	Q01684	191 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	PRM6	Q04705	352 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	YDR341C	Q05506	607 aa	Known RBP	3.04	□□□□□ -1.92
VMA7	YGR020C	DCI1	Q08558	271 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	UAF30	Q08747	228 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	YDL012C	Q12489	107 aa		3.04	□□□□□ -1.92
VMA7	YGR020C	ALG1	P16661	449 aa		3.03	□□□□□ -1.92
VMA7	YGR020C	ANR2	P36090	516 aa	Predicted RBP	3.03	□□□□□ -1.92
VMA7	YGR020C	PTI1	P39927	425 aa	Predicted RBP	3.03	□□□□□ -1.92
VMA7	YGR020C	YGR117C	P53270	476 aa		3.03	□□□□□ -1.92
VMA7	YGR020C	NAG1	Q8TGN9	163 aa		3.03	□□□□□ -1.92
VMA7	YGR020C	SSC1	P0CS90	654 aa	Known RBP	3.02	□□□□□ -1.93
VMA7	YGR020C	CDC50	P25656	391 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	LTV1	P34078	463 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	OM14	P38325	134 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	GPI16	P38875	610 aa		3.02	□□□□□ -1.93
VMA7	YGR020C	YNL208W	P40159	199 aa	Known RBP	3.02	□□□□□ -1.93
VMA7	YGR020C	NSE1	Q07913	336 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms