RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W ZUO1P32527 433 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W YEL045CP32616 141 aa1.05□□□□□ -2.24
SMC1YFL008W CSE2P33308 149 aa1.05□□□□□ -2.24
SMC1YFL008W RRT2P38332 387 aa1.05□□□□□ -2.24
SMC1YFL008W DLD2P46681 530 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W COS5P47187 383 aa1.05□□□□□ -2.24
SMC1YFL008W CAF130P53280 1122 aaPredicted RBP1.05□□□□□ -2.24
SMC1YFL008W PNG1Q02890 363 aa1.05□□□□□ -2.24
SMC1YFL008W RNY1Q02933 434 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W YDR387CQ04162 555 aa1.05□□□□□ -2.24
SMC1YFL008W COS7Q07788 383 aa1.05□□□□□ -2.24
SMC1YFL008W RAX1Q08760 435 aa1.05□□□□□ -2.24
SMC1YFL008W ADH1P00330 348 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W GPH1P06738 902 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W DEP1P31385 405 aa1.05□□□□□ -2.24
SMC1YFL008W YBL029WP38201 376 aa1.05□□□□□ -2.24
SMC1YFL008W ICS2P38284 255 aa1.05□□□□□ -2.24
SMC1YFL008W MLH1P38920 769 aa1.05□□□□□ -2.24
SMC1YFL008W ISC1P40015 477 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W TMA108P40462 946 aa1.05□□□□□ -2.24
SMC1YFL008W DSL1P53847 754 aa1.05□□□□□ -2.24
SMC1YFL008W MDM1Q01846 1127 aa1.05□□□□□ -2.24
SMC1YFL008W PRP3Q03338 469 aaPredicted RBP1.05□□□□□ -2.24
SMC1YFL008W ACL4Q03771 387 aa1.05□□□□□ -2.24
SMC1YFL008W VMS1Q04311 632 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W ROY1Q04847 553 aa1.05□□□□□ -2.24
SMC1YFL008W PBA1Q05778 276 aa1.05□□□□□ -2.24
SMC1YFL008W TSR1Q07381 788 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W SLM3Q12093 417 aa1.05□□□□□ -2.24
SMC1YFL008W LSP1Q12230 341 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W TUS1Q06412 1307 aa1.04□□□□□ -2.24
SMC1YFL008W FOB1O13329 566 aa1.04□□□□□ -2.24
SMC1YFL008W TRP1P00912 224 aa1.04□□□□□ -2.24
SMC1YFL008W PET123P17558 318 aa1.04□□□□□ -2.24
SMC1YFL008W LSB5P25369 354 aa1.04□□□□□ -2.24
SMC1YFL008W SWI3P32591 825 aa1.04□□□□□ -2.24
SMC1YFL008W RRP4P38792 359 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W GPI16P38875 610 aa1.04□□□□□ -2.24
SMC1YFL008W RIO2P40160 425 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W RRP46P53256 223 aaPredicted RBP1.04□□□□□ -2.24
SMC1YFL008W OGG1P53397 376 aaPredicted RBP1.04□□□□□ -2.24
SMC1YFL008W RPT4P53549 437 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W ADD37Q03233 198 aa1.04□□□□□ -2.24
SMC1YFL008W YHC1Q05900 231 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W NDL1Q06568 189 aa1.04□□□□□ -2.24
SMC1YFL008W RPP0P05317 312 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W SPE2P21182 396 aa1.04□□□□□ -2.24
SMC1YFL008W SBE22P38814 852 aa1.04□□□□□ -2.24
SMC1YFL008W BAT1P38891 393 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W SEC27P41811 889 aaKnown RBP1.04□□□□□ -2.24
SMC1YFL008W CAF40P53829 373 aa1.04□□□□□ -2.24
SMC1YFL008W IBD2P53892 351 aa1.04□□□□□ -2.24
SMC1YFL008W VPS72Q03388 795 aa1.04□□□□□ -2.24
SMC1YFL008W ESA1Q08649 445 aa1.04□□□□□ -2.24
SMC1YFL008W PPH22P23595 377 aa1.04□□□□□ -2.24
SMC1YFL008W YME2P32843 850 aa1.04□□□□□ -2.24
SMC1YFL008W YHR131CP38835 850 aa1.04□□□□□ -2.24
SMC1YFL008W VHS2P40463 436 aa1.04□□□□□ -2.24
SMC1YFL008W DOT5P40553 215 aa1.04□□□□□ -2.24
SMC1YFL008W PTR3P43606 678 aa1.04□□□□□ -2.24
SMC1YFL008W YMR155WQ03795 547 aa1.04□□□□□ -2.24
SMC1YFL008W GLE1Q12315 538 aa1.04□□□□□ -2.24
SMC1YFL008W RPS16AP0CX51 143 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W RPS16BP0CX52 143 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W THR4P16120 514 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W ARO2P28777 376 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SMC1YFL008W YCR041WP37265 110 aa1.03□□□□□ -2.24
SMC1YFL008W ATG18P43601 500 aa1.03□□□□□ -2.24
SMC1YFL008W PCP1P53259 346 aa1.03□□□□□ -2.24
SMC1YFL008W VPS60Q03390 229 aa1.03□□□□□ -2.24
SMC1YFL008W PRP42Q03776 544 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W BCH1Q05029 724 aa1.03□□□□□ -2.24
SMC1YFL008W PAL1Q05518 499 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W VAM3Q12241 283 aa1.03□□□□□ -2.24
SMC1YFL008W SSC1P0CS90 654 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W RPL12AP0CX53 165 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W RPL12BP0CX54 165 aa1.03□□□□□ -2.24
SMC1YFL008W RHB1P25378 209 aa1.03□□□□□ -2.24
SMC1YFL008W DPB3P27344 201 aa1.03□□□□□ -2.24
SMC1YFL008W ERV1P27882 189 aa1.03□□□□□ -2.24
SMC1YFL008W DPH5P32469 300 aaPredicted RBP1.03□□□□□ -2.24
SMC1YFL008W STB6P36085 766 aa1.03□□□□□ -2.24
SMC1YFL008W YHR177WP38867 453 aa1.03□□□□□ -2.24
SMC1YFL008W DSN1P40568 576 aa1.03□□□□□ -2.24
SMC1YFL008W BUD27P43573 796 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SMC1YFL008W LSG1P53145 640 aaKnown RBP1.03□□□□□ -2.24
SMC1YFL008W GOR1P53839 350 aa1.03□□□□□ -2.24
SMC1YFL008W MRPL19P53875 158 aa1.03□□□□□ -2.24
SMC1YFL008W MMT1Q03218 510 aa1.03□□□□□ -2.24
SMC1YFL008W YDR415CQ04033 374 aaPredicted RBP1.03□□□□□ -2.24
SMC1YFL008W SIL1Q08199 421 aa1.03□□□□□ -2.24
SMC1YFL008W RHO2P06781 192 aa1.03□□□□□ -2.25
SMC1YFL008W MRP7P12687 371 aa1.03□□□□□ -2.25
SMC1YFL008W TOA1P32773 286 aa1.03□□□□□ -2.25
SMC1YFL008W RPC37P36121 282 aa1.03□□□□□ -2.25
SMC1YFL008W MRPL27P36526 146 aaPredicted RBP1.03□□□□□ -2.25
SMC1YFL008W GPX2P38143 162 aa1.03□□□□□ -2.25
SMC1YFL008W GAT2P40209 560 aa1.03□□□□□ -2.25
SMC1YFL008W GAB1P41733 394 aa1.03□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms