RNA–Protein interactions for RNA: YDR123C

INO2, Transcript of Transcription factor, yeast

Gene INO2, Length 915 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
INO2	YDR123C	SNL1	P40548	159 aa		4.56	□□□□□ -1.68
INO2	YDR123C	SNA4	Q07549	140 aa		4.56	□□□□□ -1.68
INO2	YDR123C	TPT1	Q12272	230 aa	Known RBP	4.56	□□□□□ -1.68
INO2	YDR123C	RAD61	Q99359	647 aa		4.56	□□□□□ -1.68
INO2	YDR123C	ATP1	P07251	545 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	RNR2	P09938	399 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	ATR1	P13090	542 aa		4.55	□□□□□ -1.68
INO2	YDR123C	SAM2	P19358	384 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	GRR1	P24814	1151 aa		4.55	□□□□□ -1.68
INO2	YDR123C	PET18	P25362	215 aa		4.55	□□□□□ -1.68
INO2	YDR123C	MSK1	P32048	576 aa		4.55	□□□□□ -1.68
INO2	YDR123C	KKQ8	P36004	724 aa		4.55	□□□□□ -1.68
INO2	YDR123C	PMU1	P36069	295 aa		4.55	□□□□□ -1.68
INO2	YDR123C	DHH1	P39517	506 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	TES1	P41903	349 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	SPG5	P42933	373 aa		4.55	□□□□□ -1.68
INO2	YDR123C	RTT101	P47050	842 aa		4.55	□□□□□ -1.68
INO2	YDR123C	RET3	P53600	189 aa		4.55	□□□□□ -1.68
INO2	YDR123C	CAF40	P53829	373 aa		4.55	□□□□□ -1.68
INO2	YDR123C	PIR3	Q03180	325 aa		4.55	□□□□□ -1.68
INO2	YDR123C	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
INO2	YDR123C	ERP1	Q05359	219 aa	Known RBP	4.55	□□□□□ -1.68
INO2	YDR123C	MSC3	Q05812	728 aa		4.55	□□□□□ -1.68
INO2	YDR123C	YPR078C	Q06813	372 aa		4.55	□□□□□ -1.68
INO2	YDR123C	YAP7	Q08182	245 aa		4.55	□□□□□ -1.68
INO2	YDR123C	LDS2	Q08218	356 aa		4.55	□□□□□ -1.68
INO2	YDR123C	YOR012W	Q12351	137 aa		4.55	□□□□□ -1.68
INO2	YDR123C	RPL20A	P0CX23	172 aa	Known RBP	4.54	□□□□□ -1.68
INO2	YDR123C	RPL20B	P0CX24	172 aa	Predicted RBP	4.54	□□□□□ -1.68
INO2	YDR123C	RNA1	P11745	407 aa	Known RBP	4.54	□□□□□ -1.68
INO2	YDR123C	DBP3	P20447	523 aa	Known RBP	4.54	□□□□□ -1.68
INO2	YDR123C	YCR043C	P25361	127 aa		4.54	□□□□□ -1.68
INO2	YDR123C	ITR1	P30605	584 aa		4.54	□□□□□ -1.68
INO2	YDR123C	SKT5	P34226	696 aa		4.54	□□□□□ -1.68
INO2	YDR123C	TIF5	P38431	405 aa	Known RBP	4.54	□□□□□ -1.68
INO2	YDR123C	YHR122W	P38829	231 aa		4.54	□□□□□ -1.68
INO2	YDR123C	YND1	P40009	630 aa		4.54	□□□□□ -1.68
INO2	YDR123C	TOS3	P43637	560 aa		4.54	□□□□□ -1.68
INO2	YDR123C	SFH5	P47008	294 aa		4.54	□□□□□ -1.68
INO2	YDR123C	ABZ2	Q03266	374 aa		4.54	□□□□□ -1.68
INO2	YDR123C	NCA2	Q12374	616 aa		4.54	□□□□□ -1.68
INO2	YDR123C	YIL002W-A	Q3E7Z5	69 aa		4.54	□□□□□ -1.68
INO2	YDR123C	HEM2	P05373	342 aa		4.53	□□□□□ -1.68
INO2	YDR123C	TPK3	P05986	398 aa		4.53	□□□□□ -1.68
INO2	YDR123C	MRS3	P10566	314 aa		4.53	□□□□□ -1.68
INO2	YDR123C	GAL3	P13045	520 aa		4.53	□□□□□ -1.68
INO2	YDR123C	CDC23	P16522	626 aa		4.53	□□□□□ -1.68
INO2	YDR123C	PUT3	P25502	979 aa	Predicted RBP	4.53	□□□□□ -1.68
INO2	YDR123C	EFB1	P32471	206 aa	Known RBP	4.53	□□□□□ -1.68
INO2	YDR123C	LOS1	P33418	1100 aa	Predicted RBP	4.53	□□□□□ -1.68
INO2	YDR123C	MTC4	P38335	694 aa	Known RBP	4.53	□□□□□ -1.68
INO2	YDR123C	AZR1	P50080	613 aa		4.53	□□□□□ -1.68
INO2	YDR123C	YGL114W	P53134	725 aa		4.53	□□□□□ -1.68
INO2	YDR123C	YGR117C	P53270	476 aa		4.53	□□□□□ -1.68
INO2	YDR123C	YNL146W	P53906	100 aa		4.53	□□□□□ -1.68
INO2	YDR123C	ASA1	Q06822	443 aa		4.53	□□□□□ -1.68
INO2	YDR123C	SRL1	Q08673	210 aa		4.53	□□□□□ -1.68
INO2	YDR123C	GLE1	Q12315	538 aa		4.53	□□□□□ -1.68
INO2	YDR123C	PFK27	Q12471	397 aa	Predicted RBP	4.53	□□□□□ -1.68
INO2	YDR123C	VPS63	O13549	108 aa		4.52	□□□□□ -1.69
INO2	YDR123C	HXT2	P23585	541 aa		4.52	□□□□□ -1.69
INO2	YDR123C	YKL097C	P34245	136 aa		4.52	□□□□□ -1.69
INO2	YDR123C	YBR139W	P38109	508 aa		4.52	□□□□□ -1.69
INO2	YDR123C	MNN9	P39107	395 aa	Known RBP	4.52	□□□□□ -1.69
INO2	YDR123C	LCP5	P40079	357 aa	Predicted RBP	4.52	□□□□□ -1.69
INO2	YDR123C	SIM1	P40472	476 aa		4.52	□□□□□ -1.69
INO2	YDR123C	LYS12	P40495	371 aa	Known RBP	4.52	□□□□□ -1.69
INO2	YDR123C	YFR018C	P43599	363 aa		4.52	□□□□□ -1.69
INO2	YDR123C	YPL068C	Q02749	293 aa		4.52	□□□□□ -1.69
INO2	YDR123C	YLR297W	Q05899	129 aa		4.52	□□□□□ -1.69
INO2	YDR123C	ARR1	Q06596	294 aa		4.52	□□□□□ -1.69
INO2	YDR123C	AYT1	Q12226	474 aa		4.52	□□□□□ -1.69
INO2	YDR123C	RRP12	Q12754	1228 aa	Known RBP	4.52	□□□□□ -1.69
INO2	YDR123C	RPL15A	P05748	204 aa	Known RBP	4.51	□□□□□ -1.69
INO2	YDR123C	MAS2	P11914	482 aa		4.51	□□□□□ -1.69
INO2	YDR123C	OM45	P16547	393 aa		4.51	□□□□□ -1.69
INO2	YDR123C	SLY1	P22213	666 aa		4.51	□□□□□ -1.69
INO2	YDR123C	DBR1	P24309	405 aa	Known RBP	4.51	□□□□□ -1.69
INO2	YDR123C	SPS22	P25380	463 aa		4.51	□□□□□ -1.69
INO2	YDR123C	RIB7	P33312	244 aa		4.51	□□□□□ -1.69
INO2	YDR123C	RIB5	P38145	238 aa		4.51	□□□□□ -1.69
INO2	YDR123C	ALP1	P38971	573 aa		4.51	□□□□□ -1.69
INO2	YDR123C	FAA2	P39518	744 aa		4.51	□□□□□ -1.69
INO2	YDR123C	RPR2	P40571	144 aa		4.51	□□□□□ -1.69
INO2	YDR123C	SAD1	P43589	448 aa		4.51	□□□□□ -1.69
INO2	YDR123C	TOS2	P50078	622 aa		4.51	□□□□□ -1.69
INO2	YDR123C	IBD2	P53892	351 aa		4.51	□□□□□ -1.69
INO2	YDR123C	SPR6	Q01684	191 aa		4.51	□□□□□ -1.69
INO2	YDR123C	EGD1	Q02642	157 aa	Known RBP	4.51	□□□□□ -1.69
INO2	YDR123C	BCH1	Q05029	724 aa		4.51	□□□□□ -1.69
INO2	YDR123C	YOP1	Q12402	180 aa		4.51	□□□□□ -1.69
INO2	YDR123C	AIM45	Q12480	344 aa	Known RBP	4.51	□□□□□ -1.69
INO2	YDR123C	RRP36	Q12481	300 aa	Predicted RBP	4.51	□□□□□ -1.69
INO2	YDR123C	SET6	Q12529	373 aa		4.51	□□□□□ -1.69
INO2	YDR123C	FSH3	Q99369	266 aa		4.51	□□□□□ -1.69
INO2	YDR123C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
INO2	YDR123C	CLN3	P13365	580 aa		4.5	□□□□□ -1.69
INO2	YDR123C	PUT4	P15380	627 aa		4.5	□□□□□ -1.69
INO2	YDR123C	MRPL8	P22353	238 aa		4.5	□□□□□ -1.69
INO2	YDR123C	YCL068C	P25593	260 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms