RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W STP2P38704 541 aa3.41□□□□□ -1.86
SHR3YDL212W COX14P39103 70 aa3.41□□□□□ -1.86
SHR3YDL212W VHS2P40463 436 aa3.41□□□□□ -1.86
SHR3YDL212W BNS1P50084 137 aa3.41□□□□□ -1.86
SHR3YDL212W STD1Q02794 444 aa3.41□□□□□ -1.86
SHR3YDL212W YGK3Q12222 375 aaPredicted RBP3.41□□□□□ -1.86
SHR3YDL212W MTR10Q99189 972 aa3.41□□□□□ -1.86
SHR3YDL212W CAP2P13517 287 aa3.4□□□□□ -1.87
SHR3YDL212W PTI1P39927 425 aaPredicted RBP3.4□□□□□ -1.87
SHR3YDL212W GAT2P40209 560 aa3.4□□□□□ -1.87
SHR3YDL212W EGT2P42835 1041 aa3.4□□□□□ -1.87
SHR3YDL212W LCB3P47013 409 aa3.4□□□□□ -1.87
SHR3YDL212W BIR1P47134 954 aa3.4□□□□□ -1.87
SHR3YDL212W RPN9Q04062 393 aaKnown RBP3.4□□□□□ -1.87
SHR3YDL212W JID1Q12350 301 aa3.4□□□□□ -1.87
SHR3YDL212W NCA2Q12374 616 aa3.4□□□□□ -1.87
SHR3YDL212W SPT10P35208 640 aa3.39□□□□□ -1.87
SHR3YDL212W YHK8P38776 514 aa3.39□□□□□ -1.87
SHR3YDL212W HOT1Q03213 719 aa3.39□□□□□ -1.87
SHR3YDL212W TDA1Q03533 586 aa3.39□□□□□ -1.87
SHR3YDL212W MFG1Q07684 458 aa3.39□□□□□ -1.87
SHR3YDL212W FAB1P34756 2278 aa3.39□□□□□ -1.87
SHR3YDL212W AAT2P23542 418 aaKnown RBP3.38□□□□□ -1.87
SHR3YDL212W OXA1P39952 402 aa3.38□□□□□ -1.87
SHR3YDL212W ATG18P43601 500 aa3.38□□□□□ -1.87
SHR3YDL212W TOS3P43637 560 aa3.38□□□□□ -1.87
SHR3YDL212W MST27P53176 234 aa3.38□□□□□ -1.87
SHR3YDL212W CRH1P53301 507 aa3.38□□□□□ -1.87
SHR3YDL212W MMT1Q03218 510 aa3.38□□□□□ -1.87
SHR3YDL212W RTN1Q04947 295 aaKnown RBP3.38□□□□□ -1.87
SHR3YDL212W LIP2Q06005 328 aa3.38□□□□□ -1.87
SHR3YDL212W VPS54Q12071 889 aa3.38□□□□□ -1.87
SHR3YDL212W MED2Q12124 431 aa3.38□□□□□ -1.87
SHR3YDL212W ATP3P38077 311 aaKnown RBP3.37□□□□□ -1.87
SHR3YDL212W ZTA1P38230 334 aaKnown RBP3.37□□□□□ -1.87
SHR3YDL212W STN1P38960 494 aa3.37□□□□□ -1.87
SHR3YDL212W DFG10P40526 253 aa3.37□□□□□ -1.87
SHR3YDL212W ZIM17P42844 174 aa3.37□□□□□ -1.87
SHR3YDL212W YFR057WP43625 151 aa3.37□□□□□ -1.87
SHR3YDL212W PGU1P47180 361 aa3.37□□□□□ -1.87
SHR3YDL212W RMT2Q03305 412 aa3.37□□□□□ -1.87
SHR3YDL212W PRP42Q03776 544 aaKnown RBP3.37□□□□□ -1.87
SHR3YDL212W AIM32Q04689 311 aa3.37□□□□□ -1.87
SHR3YDL212W RPB5P20434 215 aa3.36□□□□□ -1.87
SHR3YDL212W CPR2P23285 205 aa3.36□□□□□ -1.87
SHR3YDL212W CYS4P32582 507 aaKnown RBP3.36□□□□□ -1.87
SHR3YDL212W ANR2P36090 516 aaPredicted RBP3.36□□□□□ -1.87
SHR3YDL212W YER186CP40101 306 aa3.36□□□□□ -1.87
SHR3YDL212W TOS2P50078 622 aa3.36□□□□□ -1.87
SHR3YDL212W NDE2Q07500 545 aa3.36□□□□□ -1.87
SHR3YDL212W DST1P07273 309 aa3.35□□□□□ -1.87
SHR3YDL212W SSC1P0CS90 654 aaKnown RBP3.35□□□□□ -1.87
SHR3YDL212W MPE1P35728 441 aaKnown RBP3.35□□□□□ -1.87
SHR3YDL212W GPI16P38875 610 aa3.35□□□□□ -1.87
SHR3YDL212W YER079WP40052 210 aaKnown RBP3.35□□□□□ -1.87
SHR3YDL212W AIM24P47127 394 aa3.35□□□□□ -1.87
SHR3YDL212W YET2Q04210 160 aa3.35□□□□□ -1.87
SHR3YDL212W YLR456WQ06199 204 aa3.35□□□□□ -1.87
SHR3YDL212W CMS1Q07897 291 aaKnown RBP3.35□□□□□ -1.87
SHR3YDL212W YMR102CQ03177 834 aa3.34□□□□□ -1.87
SHR3YDL212W SPC19Q03954 165 aa3.34□□□□□ -1.87
SHR3YDL212W SMC5Q08204 1093 aa3.34□□□□□ -1.87
SHR3YDL212W EAF3Q12432 401 aa3.34□□□□□ -1.87
SHR3YDL212W SKN1P33336 771 aa3.33□□□□□ -1.88
SHR3YDL212W OLA1P38219 394 aaKnown RBP3.33□□□□□ -1.88
SHR3YDL212W FAD1P38913 306 aa3.33□□□□□ -1.88
SHR3YDL212W DNL4Q08387 944 aaPredicted RBP3.33□□□□□ -1.88
SHR3YDL212W UAF30Q08747 228 aa3.33□□□□□ -1.88
SHR3YDL212W YCR024C-BQ3E7Z8 88 aa3.33□□□□□ -1.88
SHR3YDL212W PRR1P28708 518 aa3.32□□□□□ -1.88
SHR3YDL212W IES6P32617 166 aa3.32□□□□□ -1.88
SHR3YDL212W YEF1P32622 495 aa3.32□□□□□ -1.88
SHR3YDL212W MID2P36027 376 aa3.32□□□□□ -1.88
SHR3YDL212W OM14P38325 134 aa3.32□□□□□ -1.88
SHR3YDL212W INM1P38710 295 aa3.32□□□□□ -1.88
SHR3YDL212W HAC1P41546 238 aa3.32□□□□□ -1.88
SHR3YDL212W APJ1P53940 528 aa3.32□□□□□ -1.88
SHR3YDL212W MRPS16Q02608 121 aa3.32□□□□□ -1.88
SHR3YDL212W AEP3Q12089 606 aa3.32□□□□□ -1.88
SHR3YDL212W RUP1Q12242 671 aa3.32□□□□□ -1.88
SHR3YDL212W POM152P39685 1337 aa3.32□□□□□ -1.88
SHR3YDL212W COX4P04037 155 aa3.31□□□□□ -1.88
SHR3YDL212W CDC21P06785 304 aa3.31□□□□□ -1.88
SHR3YDL212W ALG1P16661 449 aa3.31□□□□□ -1.88
SHR3YDL212W MDH1P17505 334 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SHR3YDL212W CDC50P25656 391 aa3.31□□□□□ -1.88
SHR3YDL212W RIM1P32445 135 aaKnown RBP3.31□□□□□ -1.88
SHR3YDL212W SEO1P39709 593 aa3.31□□□□□ -1.88
SHR3YDL212W ALD5P40047 520 aaKnown RBP3.31□□□□□ -1.88
SHR3YDL212W MMF1P40185 145 aaKnown RBP3.31□□□□□ -1.88
SHR3YDL212W YDR341CQ05506 607 aaKnown RBP3.31□□□□□ -1.88
SHR3YDL212W RNH203Q12338 110 aa3.31□□□□□ -1.88
SHR3YDL212W CEX1Q12453 761 aa3.31□□□□□ -1.88
SHR3YDL212W PIS1P06197 220 aaKnown RBP3.3□□□□□ -1.88
SHR3YDL212W ATP1P07251 545 aaKnown RBP3.3□□□□□ -1.88
SHR3YDL212W MAM33P40513 266 aa3.3□□□□□ -1.88
SHR3YDL212W PMT5P52867 743 aa3.3□□□□□ -1.88
SHR3YDL212W YGR018CP53211 109 aa3.3□□□□□ -1.88
SHR3YDL212W RRP46P53256 223 aaPredicted RBP3.3□□□□□ -1.88
SHR3YDL212W YGR111WP53265 400 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms