RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C MCP2Q06567 569 aa3.39□□□□□ -1.87
RPA43YOR340C YPR078CQ06813 372 aa3.39□□□□□ -1.87
RPA43YOR340C TAF10Q12030 206 aa3.39□□□□□ -1.87
RPA43YOR340C SPE3Q12074 293 aaKnown RBP3.39□□□□□ -1.87
RPA43YOR340C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87 RIP-Chip
RPA43YOR340C YDL007C-AQ2V2Q0 85 aa3.39□□□□□ -1.87
RPA43YOR340C ACC1Q00955 2233 aaKnown RBP3.39□□□□□ -1.87
RPA43YOR340C FMP27Q06179 2628 aa3.39□□□□□ -1.87
RPA43YOR340C JIP3O13555 125 aa3.38□□□□□ -1.87
RPA43YOR340C MTF1P14908 341 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C REC107P21651 314 aa3.38□□□□□ -1.87
RPA43YOR340C CLB1P24868 471 aa3.38□□□□□ -1.87
RPA43YOR340C YCR051WP25631 222 aa3.38□□□□□ -1.87
RPA43YOR340C PAP1P29468 568 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C PCH2P38126 564 aa3.38□□□□□ -1.87
RPA43YOR340C MED6P38782 295 aa3.38□□□□□ -1.87
RPA43YOR340C UBA4P38820 440 aa3.38□□□□□ -1.87
RPA43YOR340C VRG4P40107 337 aa3.38□□□□□ -1.87
RPA43YOR340C BTT1P40314 149 aaPredicted RBP3.38□□□□□ -1.87
RPA43YOR340C SHQ1P40486 507 aaPredicted RBP3.38□□□□□ -1.87
RPA43YOR340C DLD2P46681 530 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C YGR126WP53274 230 aa3.38□□□□□ -1.87
RPA43YOR340C DIG1Q03063 452 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C SXM1Q04175 944 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C SPG3Q04398 127 aaPredicted RBP3.38□□□□□ -1.87
RPA43YOR340C RBS1Q05672 457 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C PDH1Q12428 516 aaKnown RBP3.38□□□□□ -1.87
RPA43YOR340C ISN1Q99312 450 aa3.38□□□□□ -1.87
RPA43YOR340C PAB1P04147 577 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
RPA43YOR340C PMS1P14242 873 aa3.37□□□□□ -1.87
RPA43YOR340C RPB8P20436 146 aa3.37□□□□□ -1.87
RPA43YOR340C RAD57P25301 460 aa3.37□□□□□ -1.87
RPA43YOR340C YCP4P25349 247 aaKnown RBP3.37□□□□□ -1.87
RPA43YOR340C HXT3P32466 567 aaKnown RBP3.37□□□□□ -1.87
RPA43YOR340C SRB2P34162 210 aa3.37□□□□□ -1.87
RPA43YOR340C GND1P38720 489 aaKnown RBP3.37□□□□□ -1.87
RPA43YOR340C HXT9P40885 567 aa3.37□□□□□ -1.87
RPA43YOR340C TFG2P41896 400 aaPredicted RBP3.37□□□□□ -1.87
RPA43YOR340C PYK2P52489 506 aaKnown RBP3.37□□□□□ -1.87
RPA43YOR340C TRM112P53738 135 aaPredicted RBP3.37□□□□□ -1.87
RPA43YOR340C DUG3P53871 357 aa3.37□□□□□ -1.87
RPA43YOR340C TOF2Q02208 771 aa3.37□□□□□ -1.87
RPA43YOR340C YMR160WQ03823 816 aa3.37□□□□□ -1.87
RPA43YOR340C CAC2Q04199 468 aa3.37□□□□□ -1.87
RPA43YOR340C TAF9Q05027 157 aa3.37□□□□□ -1.87
RPA43YOR340C YDL218WQ07629 317 aa3.37□□□□□ -1.87
RPA43YOR340C GSH2Q08220 491 aa3.37□□□□□ -1.87
RPA43YOR340C NUM1Q00402 2748 aa3.36□□□□□ -1.87
RPA43YOR340C PEP4P07267 405 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C RPL31BP0C2H9 113 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C REV1P12689 985 aa3.36□□□□□ -1.87
RPA43YOR340C PUT4P15380 627 aa3.36□□□□□ -1.87
RPA43YOR340C URA7P28274 579 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C ECM13P38195 257 aa3.36□□□□□ -1.87
RPA43YOR340C LRP1P38801 184 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C SNZ3P43545 298 aa3.36□□□□□ -1.87
RPA43YOR340C SNG1P46950 547 aa3.36□□□□□ -1.87
RPA43YOR340C VEL1P53058 206 aa3.36□□□□□ -1.87
RPA43YOR340C PKP2P53170 491 aa3.36□□□□□ -1.87
RPA43YOR340C HOP2P53187 214 aa3.36□□□□□ -1.87
RPA43YOR340C ART5P53244 586 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C YGR111WP53265 400 aa3.36□□□□□ -1.87
RPA43YOR340C SMM1P53720 384 aaKnown RBP3.36□□□□□ -1.87
RPA43YOR340C SNZ2P53824 298 aa3.36□□□□□ -1.87
RPA43YOR340C KTR6P54070 446 aa3.36□□□□□ -1.87
RPA43YOR340C ARP10Q04549 284 aa3.36□□□□□ -1.87
RPA43YOR340C SOV1Q04748 898 aa3.36□□□□□ -1.87
RPA43YOR340C ROY1Q04847 553 aa3.36□□□□□ -1.87
RPA43YOR340C VTA1Q06263 330 aa3.36□□□□□ -1.87
RPA43YOR340C POS5Q06892 414 aa3.36□□□□□ -1.87
RPA43YOR340C NDD1Q08887 554 aa3.36□□□□□ -1.87
RPA43YOR340C RDR1Q08904 546 aa3.36□□□□□ -1.87
RPA43YOR340C YLR112WQ12130 139 aa3.36□□□□□ -1.87
RPA43YOR340C NCE102Q12207 173 aaRIP-Chip data3.36□□□□□ -1.87not detected
RPA43YOR340C UBX3Q12229 455 aa3.36□□□□□ -1.87
RPA43YOR340C AFI1Q99222 893 aa3.36□□□□□ -1.87
RPA43YOR340C RAD10P06838 210 aa3.35□□□□□ -1.87
RPA43YOR340C COR1P07256 457 aa3.35□□□□□ -1.87
RPA43YOR340C PRP2P20095 876 aaPredicted RBP3.35□□□□□ -1.87
RPA43YOR340C TRX1P22217 103 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C SEC1P30619 724 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C HXT1P32465 570 aa3.35□□□□□ -1.87
RPA43YOR340C TUL1P36096 758 aa3.35□□□□□ -1.87
RPA43YOR340C MIC60P36112 540 aa3.35□□□□□ -1.87
RPA43YOR340C ROT2P38138 954 aa3.35□□□□□ -1.87
RPA43YOR340C TIF5P38431 405 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C YHR210CP38893 341 aa3.35□□□□□ -1.87
RPA43YOR340C SMC2P38989 1170 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C PHO90P39535 881 aa3.35□□□□□ -1.87
RPA43YOR340C HEM14P40012 539 aa3.35□□□□□ -1.87
RPA43YOR340C SEC9P40357 651 aa3.35□□□□□ -1.87
RPA43YOR340C EFM4P40516 257 aa3.35□□□□□ -1.87
RPA43YOR340C YIL054WP40524 105 aa3.35□□□□□ -1.87
RPA43YOR340C CHS6P40955 746 aa3.35□□□□□ -1.87
RPA43YOR340C ERG10P41338 398 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C UFE1P41834 346 aa3.35□□□□□ -1.87
RPA43YOR340C ALK1P43633 760 aaKnown RBP3.35□□□□□ -1.87
RPA43YOR340C BRO1P48582 844 aa3.35□□□□□ -1.87
RPA43YOR340C OGG1P53397 376 aaPredicted RBP3.35□□□□□ -1.87
RPA43YOR340C BET4Q00618 327 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms