RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C MDM34P53083 459 aa7.11□□□□□ -1.27
RUP1YOR138C YGR035CP53222 116 aa7.11□□□□□ -1.27
RUP1YOR138C YML108WQ03759 105 aa7.11□□□□□ -1.27
RUP1YOR138C SIA1Q12212 622 aa7.11□□□□□ -1.27
RUP1YOR138C SUS1Q6WNK7 96 aa7.11□□□□□ -1.27
RUP1YOR138C NDC1P32500 655 aa7.1□□□□□ -1.27
RUP1YOR138C PET309P32522 965 aaPredicted RBP7.1□□□□□ -1.27
RUP1YOR138C SPO23P33757 523 aa7.1□□□□□ -1.27
RUP1YOR138C UIP5P36137 443 aa7.1□□□□□ -1.27
RUP1YOR138C MDM31P38880 579 aa7.1□□□□□ -1.27
RUP1YOR138C YJL043WP47053 257 aa7.1□□□□□ -1.27
RUP1YOR138C YJR149WP47177 404 aa7.1□□□□□ -1.27
RUP1YOR138C NUP42P49686 430 aaKnown RBP7.1□□□□□ -1.27
RUP1YOR138C PFA5Q03289 374 aa7.1□□□□□ -1.27
RUP1YOR138C OPT2Q06593 877 aa7.1□□□□□ -1.27
RUP1YOR138C BAG7Q12128 409 aa7.1□□□□□ -1.27
RUP1YOR138C YPR1Q12458 312 aa7.1□□□□□ -1.27
RUP1YOR138C LAT1P12695 482 aaKnown RBP7.1□□□□□ -1.27
RUP1YOR138C APA1P16550 321 aaKnown RBP7.1□□□□□ -1.27
RUP1YOR138C STF2P16965 84 aa7.1□□□□□ -1.27
RUP1YOR138C RDS2P19541 446 aaKnown RBP7.1□□□□□ -1.27
RUP1YOR138C KAP122P32767 1081 aa7.1□□□□□ -1.27
RUP1YOR138C PPQ1P32945 549 aa7.1□□□□□ -1.27
RUP1YOR138C PMT1P33775 817 aa7.1□□□□□ -1.27
RUP1YOR138C YPT52P36018 234 aaKnown RBP7.1□□□□□ -1.27
RUP1YOR138C SOL2P37262 315 aa7.1□□□□□ -1.27
RUP1YOR138C CTF8P38877 133 aa7.1□□□□□ -1.27
RUP1YOR138C VMA7P39111 118 aa7.1□□□□□ -1.27
RUP1YOR138C HMS2P47175 358 aa7.1□□□□□ -1.27
RUP1YOR138C AAT1Q01802 451 aa7.1□□□□□ -1.27
RUP1YOR138C YPL071CQ02864 156 aa7.1□□□□□ -1.27
RUP1YOR138C BSP1Q06604 576 aa7.1□□□□□ -1.27
RUP1YOR138C CLP1Q08685 445 aaPredicted RBP7.1□□□□□ -1.27
RUP1YOR138C MDM32Q12171 622 aa7.1□□□□□ -1.27
RUP1YOR138C NSI1Q12457 570 aa7.1□□□□□ -1.27
RUP1YOR138C NOP56Q12460 504 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
RUP1YOR138C MRX4Q12467 430 aa7.1□□□□□ -1.27
RUP1YOR138C TRX3P25372 127 aa7.09□□□□□ -1.27
RUP1YOR138C IDH1P28834 360 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
RUP1YOR138C PIM1P36775 1133 aa7.09□□□□□ -1.27
RUP1YOR138C ZTA1P38230 334 aaKnown RBP7.09□□□□□ -1.27
RUP1YOR138C YHR035WP38769 630 aa7.09□□□□□ -1.27
RUP1YOR138C PNG1Q02890 363 aa7.09□□□□□ -1.27
RUP1YOR138C FDC1Q03034 503 aa7.09□□□□□ -1.27
RUP1YOR138C VHS1Q03785 461 aa7.09□□□□□ -1.27
RUP1YOR138C ARX1Q03862 593 aaKnown RBP7.09□□□□□ -1.27
RUP1YOR138C RNH1Q04740 348 aa7.09□□□□□ -1.27
RUP1YOR138C YMR034CQ05131 434 aaPredicted RBP7.09□□□□□ -1.27
RUP1YOR138C SYO1Q07395 620 aa7.09□□□□□ -1.27
RUP1YOR138C DCI1Q08558 271 aa7.09□□□□□ -1.27
RUP1YOR138C YPL199CQ08954 240 aa7.09□□□□□ -1.27
RUP1YOR138C NMD4Q12129 218 aa7.09□□□□□ -1.27
RUP1YOR138C CPA1P07258 411 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C SEN2P16658 377 aa7.08□□□□□ -1.28
RUP1YOR138C RRP7P25368 297 aaPredicted RBP7.08□□□□□ -1.28
RUP1YOR138C ATG22P25568 528 aa7.08□□□□□ -1.28
RUP1YOR138C ERG9P29704 444 aa7.08□□□□□ -1.28
RUP1YOR138C OAC1P32332 324 aa7.08□□□□□ -1.28
RUP1YOR138C YKL063CP35725 167 aa7.08□□□□□ -1.28
RUP1YOR138C DHR2P36009 735 aaPredicted RBP7.08□□□□□ -1.28
RUP1YOR138C EMC3P36039 253 aa7.08□□□□□ -1.28
RUP1YOR138C GLY1P37303 387 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C MLH1P38920 769 aa7.08□□□□□ -1.28
RUP1YOR138C MBP1P39678 833 aa7.08□□□□□ -1.28
RUP1YOR138C ZRG8P40021 1076 aa7.08□□□□□ -1.28
RUP1YOR138C MPC1P53157 130 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C TPS1Q00764 495 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C GIP3Q03016 1276 aa7.08□□□□□ -1.28
RUP1YOR138C YMR087WQ04299 284 aa7.08□□□□□ -1.28
RUP1YOR138C SWF1Q04629 336 aa7.08□□□□□ -1.28
RUP1YOR138C ARG7Q04728 441 aa7.08□□□□□ -1.28
RUP1YOR138C RAX1Q08760 435 aa7.08□□□□□ -1.28
RUP1YOR138C DIN7Q12086 430 aa7.08□□□□□ -1.28
RUP1YOR138C LAG2Q92325 660 aa7.08□□□□□ -1.28
RUP1YOR138C HMG1P12683 1054 aa7.08□□□□□ -1.28
RUP1YOR138C DBP3P20447 523 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C ARE1P25628 610 aa7.08□□□□□ -1.28
RUP1YOR138C RSM22P36056 628 aa7.08□□□□□ -1.28
RUP1YOR138C BAP2P38084 609 aa7.08□□□□□ -1.28
RUP1YOR138C YBR071WP38243 211 aa7.08□□□□□ -1.28
RUP1YOR138C STP2P38704 541 aa7.08□□□□□ -1.28
RUP1YOR138C DBP8P38719 431 aa7.08□□□□□ -1.28
RUP1YOR138C YHR127WP38833 243 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C NVJ1P38881 321 aa7.08□□□□□ -1.28
RUP1YOR138C RPH1P39956 796 aa7.08□□□□□ -1.28
RUP1YOR138C YTA6P40328 754 aa7.08□□□□□ -1.28
RUP1YOR138C NTA1P40354 457 aa7.08□□□□□ -1.28
RUP1YOR138C AZF1P41696 914 aa7.08□□□□□ -1.28
RUP1YOR138C YGR201CP42936 225 aa7.08□□□□□ -1.28
RUP1YOR138C YFL052WP43551 465 aa7.08□□□□□ -1.28
RUP1YOR138C IRC18P47056 224 aa7.08□□□□□ -1.28
RUP1YOR138C PRM1P53835 661 aa7.08□□□□□ -1.28
RUP1YOR138C YMR178WQ03219 274 aaKnown RBP7.08□□□□□ -1.28
RUP1YOR138C TRM82Q03774 444 aa7.08□□□□□ -1.28
RUP1YOR138C RRG7Q08774 242 aaPredicted RBP7.08□□□□□ -1.28
RUP1YOR138C TRM8Q12009 286 aa7.08□□□□□ -1.28
RUP1YOR138C SFM1Q12314 213 aa7.08□□□□□ -1.28
RUP1YOR138C YOR338WQ99326 363 aa7.08□□□□□ -1.28
RUP1YOR138C UBR1P19812 1950 aa7.08□□□□□ -1.28
RUP1YOR138C YPR096CO13587 100 aa7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms