RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	PPE1	P38796	400 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	YEL076C	P39971	216 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	PCL6	P40038	420 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	NEO1	P40527	1151 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	GLR1	P41921	483 aa	Known RBP	4.06	□□□□□ -1.76
SEN1	YLR430W	GAT1	P43574	510 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	LSB1	P53281	241 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	MSC1	Q03104	513 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	YDR222W	Q04925	415 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	PAL1	Q05518	499 aa	Known RBP	4.06	□□□□□ -1.76
SEN1	YLR430W	YGL194C-A	Q2V2P6	80 aa		4.06	□□□□□ -1.76
SEN1	YLR430W	SPE1	P08432	466 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	PET9	P18239	318 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	ECT1	P33412	323 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	TUL1	P36096	758 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	ZIM17	P42844	174 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	AAD10	P47182	288 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	PHB2	P50085	310 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	DIA3	P52290	468 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	NBP35	P52920	328 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	KTR6	P54070	446 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	ERV25	P54837	211 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	YPL257W	Q08974	193 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	RTN2	Q12443	393 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	MAG1	P22134	296 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	ERG9	P29704	444 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	MRPL6	P32904	214 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	POG1	P40473	351 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	YGL101W	P53144	215 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	BUD32	P53323	261 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	RRN9	P53437	365 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	UBP16	Q02863	499 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	PNS1	Q12412	539 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	CMR1	Q12510	522 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	UTR1	P21373	530 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	MRPL4	P36517	319 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	APL3	P38065	1025 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	SHG1	P38337	142 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	YHR054C	P38780	354 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	LOH1	P47055	219 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	SAE3	P89114	91 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	YDC1	Q02896	317 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	YMR265C	Q03508	461 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	YMR034C	Q05131	434 aa	Predicted RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	TPO1	Q07824	586 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	LAP2	Q10740	671 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	YPL119C-A	Q3E751	87 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	GAL80	P04387	435 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	SNC1	P31109	117 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	WBP1	P33767	430 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	VRG4	P40107	337 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	NSE4	P43124	402 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	RNH70	P53331	553 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	SPC19	Q03954	165 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	THI7	Q05998	598 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	LPX1	Q12405	387 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	SFG1	Q12507	346 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	SPS2	P08459	502 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	RPL31A	P0C2H8	113 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	RPL31B	P0C2H9	113 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	MTC2	P34246	357 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	CRP1	P38845	465 aa	Known RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	FAD1	P38913	306 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	MPS3	P47069	682 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	MTR3	P48240	250 aa	Predicted RBP	4.05	□□□□□ -1.76
SEN1	YLR430W	SCP1	Q08873	200 aa		4.05	□□□□□ -1.76
SEN1	YLR430W	FAA1	P30624	700 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	HMT1	P38074	348 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	UBA4	P38820	440 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	AIM46	P38885	310 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	FMP52	P40008	231 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	RPL10	P41805	221 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	NSA1	P53136	463 aa	Predicted RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	SLD5	Q03406	294 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	TRK2	P28584	889 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	ATM1	P40416	690 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	TMA108	P40462	946 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	SSY5	P47002	699 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	AZR1	P50080	613 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	YGR273C	P53329	174 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	PML39	Q03760	334 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	LEA1	Q08963	238 aa	Predicted RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	YOP1	Q12402	180 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	COA6	Q3E846	104 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	ARG80	P07249	177 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	SEC62	P21825	274 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	DBP1	P24784	617 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	PHO91	P27514	894 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	LSM5	P40089	93 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	GLC8	P41818	229 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	MCM22	P47167	239 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	ALT2	P52892	507 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SEN1	YLR430W	RPA49	Q01080	415 aa	Predicted RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	ROD1	Q02805	837 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	RTN1	Q04947	295 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	ENV7	Q12003	364 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	ERG27	Q12452	347 aa	Known RBP	4.04	□□□□□ -1.76
SEN1	YLR430W	SKS1	Q12505	502 aa		4.04	□□□□□ -1.76
SEN1	YLR430W	FUN14	P18411	198 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms