RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B YIF1P53845 314 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B CWC25P53854 179 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B BNI5P53890 448 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B GPI15P53961 229 aa0.47□□□□□ -2.33
SBH1YER087C-B TIM10P87108 93 aa0.47□□□□□ -2.33
SBH1YER087C-B PEX25Q02969 394 aa0.47□□□□□ -2.33
SBH1YER087C-B YMR102CQ03177 834 aa0.47□□□□□ -2.33
SBH1YER087C-B MMT1Q03218 510 aa0.47□□□□□ -2.33
SBH1YER087C-B BET5Q03630 159 aa0.47□□□□□ -2.33
SBH1YER087C-B ARX1Q03862 593 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B YMR130WQ04223 302 aa0.47□□□□□ -2.33
SBH1YER087C-B BCH1Q05029 724 aa0.47□□□□□ -2.33
SBH1YER087C-B HRI1Q05905 244 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B SNT309Q06091 175 aaPredicted RBP0.47□□□□□ -2.33
SBH1YER087C-B MMR1Q06324 491 aa0.47□□□□□ -2.33
SBH1YER087C-B RRP9Q06506 573 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B MHR1Q06630 226 aa0.47□□□□□ -2.33
SBH1YER087C-B TSR1Q07381 788 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B NDE2Q07500 545 aa0.47□□□□□ -2.33
SBH1YER087C-B SOR2Q07786 357 aa0.47□□□□□ -2.33
SBH1YER087C-B CMS1Q07897 291 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B LOT6Q07923 191 aa0.47□□□□□ -2.33
SBH1YER087C-B SMC5Q08204 1093 aa0.47□□□□□ -2.33
SBH1YER087C-B RAX1Q08760 435 aa0.47□□□□□ -2.33
SBH1YER087C-B SRL2Q12020 392 aa0.47□□□□□ -2.33
SBH1YER087C-B YPR022CQ12139 1133 aa0.47□□□□□ -2.33
SBH1YER087C-B VAM3Q12241 283 aa0.47□□□□□ -2.33
SBH1YER087C-B JID1Q12350 301 aa0.47□□□□□ -2.33
SBH1YER087C-B WTM1Q12363 437 aaKnown RBP0.47□□□□□ -2.33
SBH1YER087C-B CEX1Q12453 761 aa0.47□□□□□ -2.33
SBH1YER087C-B SKS1Q12505 502 aa0.47□□□□□ -2.33
SBH1YER087C-B SMC6Q12749 1114 aa0.47□□□□□ -2.33
SBH1YER087C-B MTR10Q99189 972 aa0.47□□□□□ -2.33
SBH1YER087C-B COX3P00420 269 aa0.46□□□□□ -2.34
SBH1YER087C-B PAB1P04147 577 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34 RIP-Chip
SBH1YER087C-B ILV5P06168 395 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B CYC3P06182 269 aa0.46□□□□□ -2.34
SBH1YER087C-B CBP6P07253 162 aaPredicted RBP0.46□□□□□ -2.34
SBH1YER087C-B RPS8AP0CX39 200 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RPS8BP0CX40 200 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RPL1AP0CX43 217 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RPL1BP0CX44 217 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B SAM1P10659 382 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B MAS2P11914 482 aa0.46□□□□□ -2.34
SBH1YER087C-B NAT1P12945 854 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B MSI1P13712 422 aa0.46□□□□□ -2.34
SBH1YER087C-B RPL3P14126 387 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B HSP26P15992 214 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
SBH1YER087C-B ALG1P16661 449 aa0.46□□□□□ -2.34
SBH1YER087C-B SPO12P17123 173 aa0.46□□□□□ -2.34
SBH1YER087C-B MDH1P17505 334 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
SBH1YER087C-B SRV2P17555 526 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B PET123P17558 318 aa0.46□□□□□ -2.34
SBH1YER087C-B SAM2P19358 384 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B CLN1P20437 546 aa0.46□□□□□ -2.34
SBH1YER087C-B SLY1P22213 666 aa0.46□□□□□ -2.34
SBH1YER087C-B RPI1P23250 407 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B EXG1P23776 448 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B CLB1P24868 471 aa0.46□□□□□ -2.34
SBH1YER087C-B RAD57P25301 460 aa0.46□□□□□ -2.34
SBH1YER087C-B DAL2P25335 343 aa0.46□□□□□ -2.34
SBH1YER087C-B RVS161P25343 265 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RRP7P25368 297 aaPredicted RBP0.46□□□□□ -2.34
SBH1YER087C-B YCL068CP25593 260 aa0.46□□□□□ -2.34
SBH1YER087C-B BEM1P29366 551 aa0.46□□□□□ -2.34
SBH1YER087C-B DBF4P32325 704 aa0.46□□□□□ -2.34
SBH1YER087C-B PUP2P32379 260 aa0.46□□□□□ -2.34
SBH1YER087C-B RIM1P32445 135 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B APE2P32454 952 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B EFB1P32471 206 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B NUP2P32499 720 aa0.46□□□□□ -2.34
SBH1YER087C-B CYS4P32582 507 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RAD5P32849 1169 aaPredicted RBP0.46□□□□□ -2.34
SBH1YER087C-B LTV1P34078 463 aa0.46□□□□□ -2.34
SBH1YER087C-B SKT5P34226 696 aa0.46□□□□□ -2.34
SBH1YER087C-B PEX5P35056 612 aa0.46□□□□□ -2.34
SBH1YER087C-B KKQ8P36004 724 aa0.46□□□□□ -2.34
SBH1YER087C-B MCR1P36060 302 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B ATP3P38077 311 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B SWD3P38123 315 aa0.46□□□□□ -2.34
SBH1YER087C-B ZTA1P38230 334 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B RFS1P38234 210 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B SLM4P38247 162 aa0.46□□□□□ -2.34
SBH1YER087C-B MMS4P38257 691 aa0.46□□□□□ -2.34
SBH1YER087C-B MSG5P38590 489 aa0.46□□□□□ -2.34
SBH1YER087C-B LSM12P38828 187 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B STN1P38960 494 aa0.46□□□□□ -2.34
SBH1YER087C-B SER3P40054 469 aa0.46□□□□□ -2.34
SBH1YER087C-B UTP18P40362 594 aaPredicted RBP0.46□□□□□ -2.34
SBH1YER087C-B PAN6P40459 309 aa0.46□□□□□ -2.34
SBH1YER087C-B MAM33P40513 266 aa0.46□□□□□ -2.34
SBH1YER087C-B YIL067CP40514 678 aa0.46□□□□□ -2.34
SBH1YER087C-B OST1P41543 476 aaKnown RBP0.46□□□□□ -2.34
SBH1YER087C-B GAB1P41733 394 aa0.46□□□□□ -2.34
SBH1YER087C-B KEG1P43614 200 aa0.46□□□□□ -2.34
SBH1YER087C-B TOS3P43637 560 aa0.46□□□□□ -2.34
SBH1YER087C-B AIM24P47127 394 aa0.46□□□□□ -2.34
SBH1YER087C-B HMS2P47175 358 aa0.46□□□□□ -2.34
SBH1YER087C-B TCB2P48231 1178 aa0.46□□□□□ -2.34
SBH1YER087C-B AZR1P50080 613 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms