RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	UIP3	P39547	235 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SEO1	P39709	593 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SAH1	P39954	449 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	LCP5	P40079	357 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	PRM2	P40534	656 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	FIG4	P42837	879 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	EMW1	P42842	904 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	SLS1	P42900	643 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	PET130	P47065	347 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	AZR1	P50080	613 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SOL1	P50278	321 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YGL159W	P53110	370 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YNR065C	P53751	1116 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ASI2	P53895	289 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	NMA111	P53920	997 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ERG5	P54781	538 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SAE3	P89114	91 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	TIM44	Q01852	431 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YPL071C	Q02864	156 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	MRP51	Q02950	344 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YMR209C	Q03648	457 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	TRM82	Q03774	444 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SNU56	Q03782	492 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	RIM13	Q03792	727 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	CRF1	Q04930	467 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	CDD1	Q06549	142 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YNG1	Q08465	219 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ATX2	Q12067	313 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YDR061W	Q12298	539 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	BCK1	Q01389	1478 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	AI4	P03878	556 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	CDC7	P06243	507 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SEC12	P11655	471 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SCH9	P11792	824 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	SRV2	P17555	526 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	COQ1	P18900	473 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YUR1	P26725	428 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	AAR2	P32357	355 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	SIP1	P32578	815 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	RGT1	P32862	1170 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ECT1	P33412	323 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	TRM2	P33753	639 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SSB1	YDL229W	YNK1	P36010	153 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	CSE4	P36012	229 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	TVP38	P36164	337 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	MRPL15	P36523	253 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YPK3	P38070	525 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ECM8	P38246	354 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	VHC1	P38329	1120 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	FET3	P38993	636 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SEC72	P39742	193 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	EXO1	P39875	702 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	LSM4	P40070	187 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	VRG4	P40107	337 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	PRM10	P42946	383 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YAE1	P47118	141 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	AAD10	P47182	288 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ALT2	P52892	507 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	GTF1	P53260	183 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	OAZ1	Q02803	292 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	EKI1	Q03764	534 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	ADY4	Q05955	493 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SSK1	Q07084	712 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	SPO75	Q07798	868 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	IZH3	Q07959	543 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YLR036C	Q07986	203 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	THI21	Q08975	551 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YLR053C	Q12026	108 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	YOL107W	Q12239	342 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	MRX4	Q12467	430 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	PSF1	Q12488	208 aa		4.18	□□□□□ -1.74
SSB1	YDL229W	EFG1	Q3E705	233 aa	Known RBP	4.18	□□□□□ -1.74
SSB1	YDL229W	RSF2	P46974	1380 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	YOR304C-A	O14468	76 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	COR1	P07256	457 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	UGA1	P17649	471 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	PRE1	P22141	198 aa	Known RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	STE50	P25344	346 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	CDC20	P26309	610 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	HOG1	P32485	435 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	SPR1	P32603	445 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	TCD2	P36101	447 aa	Known RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	FMP23	P38231	175 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	SHE3	P38272	425 aa	Known RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	DIA4	P38705	446 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	COS8	P38723	381 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	SFB3	P38810	929 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	AIM46	P38885	310 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	ACA1	P39970	489 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	LRO1	P40345	661 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	MRX5	P47007	382 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	ALY2	P47029	1046 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	EMC2	P47133	292 aa	Known RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	CTF18	P49956	741 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	SPT20	P50875	604 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	COS12	P53053	380 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	YGL108C	P53139	140 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	USE1	P53146	245 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	YGR017W	P53210	297 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms