RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	MMS4	P38257	691 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	YAL037W	P39728	267 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	LSM5	P40089	93 aa	Known RBP	3.13	□□□□□ -1.91
ATP16	YDL004W	JLP2	P40206	208 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	BNI5	P53890	448 aa	Known RBP	3.13	□□□□□ -1.91
ATP16	YDL004W	HAL1	Q01766	294 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	NUP116	Q02630	1113 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	KAP120	Q02932	1032 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	BCH1	Q05029	724 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	DON1	Q05610	365 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	SCM3	Q12334	223 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	AFI1	Q99222	893 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	NFU1	P32860	256 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	SRB7	P47822	140 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	VPS72	Q03388	795 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	TAF12	Q03761	539 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	SRL2	Q12020	392 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	AHC1	Q12433	566 aa		3.12	□□□□□ -1.91
ATP16	YDL004W	BRF1	P29056	596 aa		3.11	□□□□□ -1.91
ATP16	YDL004W	PRS1	P32895	427 aa	Known RBP	3.11	□□□□□ -1.91
ATP16	YDL004W	SFH5	P47008	294 aa		3.11	□□□□□ -1.91
ATP16	YDL004W	YJR085C	P47131	105 aa	Known RBP	3.11	□□□□□ -1.91
ATP16	YDL004W	OCA2	P53949	197 aa		3.11	□□□□□ -1.91
ATP16	YDL004W	YMR130W	Q04223	302 aa		3.11	□□□□□ -1.91
ATP16	YDL004W	DCS1	Q06151	350 aa		3.11	□□□□□ -1.91
ATP16	YDL004W	HOM3	P10869	527 aa		3.1	□□□□□ -1.91
ATP16	YDL004W	NAT1	P12945	854 aa	Known RBP	3.1	□□□□□ -1.91
ATP16	YDL004W	YBR056W	P38081	501 aa		3.1	□□□□□ -1.91
ATP16	YDL004W	MDE1	P47095	244 aa		3.1	□□□□□ -1.91
ATP16	YDL004W	ADA2	Q02336	434 aa		3.1	□□□□□ -1.91
ATP16	YDL004W	IMA3	P0CW40	589 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	IMA4	P0CW41	589 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	NUP2	P32499	720 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	TFB1	P32776	642 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	CHK1	P38147	527 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	SBE22	P38814	852 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	NOC2	P39744	710 aa	Known RBP	3.09	□□□□□ -1.91
ATP16	YDL004W	AIM10	P39965	576 aa	Known RBP	3.09	□□□□□ -1.91
ATP16	YDL004W	YIL029C	P40538	142 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	ACL4	Q03771	387 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	TSA2	Q04120	196 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	IMA2	Q08295	589 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	IZH2	Q12442	317 aa		3.09	□□□□□ -1.91
ATP16	YDL004W	YCL068C	P25593	260 aa		3.08	□□□□□ -1.92
ATP16	YDL004W	ADK2	P26364	225 aa		3.08	□□□□□ -1.92
ATP16	YDL004W	ERV1	P27882	189 aa		3.08	□□□□□ -1.92
ATP16	YDL004W	UTP18	P40362	594 aa	Predicted RBP	3.08	□□□□□ -1.92
ATP16	YDL004W	MTQ1	P53944	314 aa		3.08	□□□□□ -1.92
ATP16	YDL004W	SNT309	Q06091	175 aa	Predicted RBP	3.08	□□□□□ -1.92
ATP16	YDL004W	CUE5	Q08412	411 aa	Known RBP	3.08	□□□□□ -1.92
ATP16	YDL004W	ATG34	Q12292	412 aa		3.08	□□□□□ -1.92
ATP16	YDL004W	URA7	P28274	579 aa	Known RBP	3.07	□□□□□ -1.92
ATP16	YDL004W	MIG3	P39943	394 aa		3.07	□□□□□ -1.92
ATP16	YDL004W	GAB1	P41733	394 aa		3.07	□□□□□ -1.92
ATP16	YDL004W	CCE1	Q03702	353 aa		3.07	□□□□□ -1.92
ATP16	YDL004W	MMR1	Q06324	491 aa		3.07	□□□□□ -1.92
ATP16	YDL004W	BUG1	Q12191	341 aa		3.07	□□□□□ -1.92
ATP16	YDL004W	URH1	Q04179	340 aa		3.06	□□□□□ -1.92
ATP16	YDL004W	ERB1	Q04660	807 aa	Known RBP	3.06	□□□□□ -1.92
ATP16	YDL004W	VPS54	Q12071	889 aa		3.06	□□□□□ -1.92
ATP16	YDL004W	TPT1	Q12272	230 aa	Known RBP	3.06	□□□□□ -1.92
ATP16	YDL004W	FAB1	P34756	2278 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	COX3	P00420	269 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	ADE4	P04046	510 aa	Known RBP	3.05	□□□□□ -1.92
ATP16	YDL004W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
ATP16	YDL004W	HEL1	P36113	551 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	SLM4	P38247	162 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	COX14	P39103	70 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	MRM2	P53123	320 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	RRP9	Q06506	573 aa	Known RBP	3.05	□□□□□ -1.92
ATP16	YDL004W	RAX1	Q08760	435 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	PLP2	Q12017	286 aa		3.05	□□□□□ -1.92
ATP16	YDL004W	YKL097C	P34245	136 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	RRP1	P35178	278 aa	Predicted RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	ATP3	P38077	311 aa	Known RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	MRP21	P38175	177 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	SIM1	P40472	476 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	CAK1	P43568	368 aa	Predicted RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	BIR1	P47134	954 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	RPT4	P53549	437 aa	Known RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	STD1	Q02794	444 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	HOT1	Q03213	719 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	YDR131C	Q03899	556 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	LIP2	Q06005	328 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	RIF2	Q06208	395 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	NDE2	Q07500	545 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	SMF3	Q12078	473 aa	Predicted RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	SNU66	Q12420	587 aa	Predicted RBP	3.04	□□□□□ -1.92
ATP16	YDL004W	MTR10	Q99189	972 aa		3.04	□□□□□ -1.92
ATP16	YDL004W	MSI1	P13712	422 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	ARO3	P14843	370 aa	Known RBP	3.03	□□□□□ -1.92
ATP16	YDL004W	CLB1	P24868	471 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	RPC53	P25441	422 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	PHA2	P32452	334 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	RTC2	P38279	296 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	SER3	P40054	469 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	YFR057W	P43625	151 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	LCB3	P47013	409 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	SPC19	Q03954	165 aa		3.03	□□□□□ -1.92
ATP16	YDL004W	JID1	Q12350	301 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms