RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	FHL1	P39521	936 aa		0.03	□□□□□ -2.4
snR45	snR45	VPS8	P39702	1274 aa		0.03	□□□□□ -2.4
snR45	snR45	RBG1	P39729	369 aa		0.03	□□□□□ -2.4
snR45	snR45	RIC1	P40395	1056 aa		0.03	□□□□□ -2.4
snR45	snR45	AVT7	P40501	490 aa		0.03	□□□□□ -2.4
snR45	snR45	YJL213W	P40896	331 aa		0.03	□□□□□ -2.4
snR45	snR45	RPS29B	P41058	56 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	BUD6	P41697	788 aa		0.03	□□□□□ -2.4
snR45	snR45	VMA13	P41807	478 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	UFE1	P41834	346 aa		0.03	□□□□□ -2.4
snR45	snR45	GPD2	P41911	440 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	YFL051C	P43552	160 aa		0.03	□□□□□ -2.4
snR45	snR45	CAK1	P43568	368 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	ECO1	P43605	281 aa		0.03	□□□□□ -2.4
snR45	snR45	YFR035C	P43608	114 aa		0.03	□□□□□ -2.4
snR45	snR45	RET2	P43621	546 aa		0.03	□□□□□ -2.4
snR45	snR45	GUF1	P46943	645 aa		0.03	□□□□□ -2.4
snR45	snR45	YJR012C	P47087	207 aa		0.03	□□□□□ -2.4
snR45	snR45	RAD17	P48581	401 aa		0.03	□□□□□ -2.4
snR45	snR45	UBP8	P50102	471 aa		0.03	□□□□□ -2.4
snR45	snR45	SOL1	P50278	321 aa		0.03	□□□□□ -2.4
snR45	snR45	DIA3	P52290	468 aa		0.03	□□□□□ -2.4
snR45	snR45	PMT5	P52867	743 aa		0.03	□□□□□ -2.4
snR45	snR45	SBH2	P52871	88 aa		0.03	□□□□□ -2.4
snR45	snR45	SEH1	P53011	349 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	IMA1	P53051	589 aa		0.03	□□□□□ -2.4
snR45	snR45	LSG1	P53145	640 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	SPC105	P53148	917 aa		0.03	□□□□□ -2.4
snR45	snR45	SWC4	P53201	476 aa		0.03	□□□□□ -2.4
snR45	snR45	SYF2	P53277	215 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	CAF130	P53280	1122 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	ZPR1	P53303	486 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	MEP3	P53390	489 aa		0.03	□□□□□ -2.4
snR45	snR45	ARE2	P53629	642 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	PAP2	P53632	584 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	ESF2	P53743	316 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	FOL1	P53848	824 aa		0.03	□□□□□ -2.4
snR45	snR45	YNL193W	P53870	558 aa		0.03	□□□□□ -2.4
snR45	snR45	ALF1	P53904	254 aa		0.03	□□□□□ -2.4
snR45	snR45	YNL146W	P53906	100 aa		0.03	□□□□□ -2.4
snR45	snR45	SAM50	P53969	484 aa		0.03	□□□□□ -2.4
snR45	snR45	REG1	Q00816	1014 aa		0.03	□□□□□ -2.4
snR45	snR45	SED1	Q01589	338 aa		0.03	□□□□□ -2.4
snR45	snR45	CIK1	Q01649	594 aa		0.03	□□□□□ -2.4
snR45	snR45	YPL108W	Q02872	168 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	ATG21	Q02887	496 aa		0.03	□□□□□ -2.4
snR45	snR45	PIR1	Q03178	341 aa		0.03	□□□□□ -2.4
snR45	snR45	CWC21	Q03375	135 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	MZM1	Q03429	123 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	TRS130	Q03660	1102 aa		0.03	□□□□□ -2.4
snR45	snR45	YDR131C	Q03899	556 aa		0.03	□□□□□ -2.4
snR45	snR45	YMR244W	Q04018	355 aa		0.03	□□□□□ -2.4
snR45	snR45	RAD30	Q04049	632 aa		0.03	□□□□□ -2.4
snR45	snR45	NHX1	Q04121	633 aa		0.03	□□□□□ -2.4
snR45	snR45	YMR087W	Q04299	284 aa		0.03	□□□□□ -2.4
snR45	snR45	YDR109C	Q04585	715 aa		0.03	□□□□□ -2.4
snR45	snR45	NAT4	Q04751	285 aa		0.03	□□□□□ -2.4
snR45	snR45	EIS1	Q05050	843 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	YDR341C	Q05506	607 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	RRP45	Q05636	305 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	PHM6	Q05637	104 aa		0.03	□□□□□ -2.4
snR45	snR45	UTP21	Q06078	939 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	COG4	Q06096	861 aa		0.03	□□□□□ -2.4
snR45	snR45	ECM7	Q06200	448 aa		0.03	□□□□□ -2.4
snR45	snR45	ATG26	Q06321	1198 aa		0.03	□□□□□ -2.4
snR45	snR45	VAM6	Q07468	1049 aa		0.03	□□□□□ -2.4
snR45	snR45	CRD1	Q07560	283 aa		0.03	□□□□□ -2.4
snR45	snR45	YDL144C	Q07589	356 aa		0.03	□□□□□ -2.4
snR45	snR45	LCL2	Q08045	131 aa		0.03	□□□□□ -2.4
snR45	snR45	DIS3	Q08162	1001 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	TRE2	Q08693	809 aa		0.03	□□□□□ -2.4
snR45	snR45	DDC1	Q08949	612 aa		0.03	□□□□□ -2.4
snR45	snR45	YPL199C	Q08954	240 aa		0.03	□□□□□ -2.4
snR45	snR45	GPM2	Q12008	311 aa		0.03	□□□□□ -2.4
snR45	snR45	VPS68	Q12016	184 aa		0.03	□□□□□ -2.4
snR45	snR45	SLF1	Q12034	447 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	REX3	Q12090	404 aa		0.03	□□□□□ -2.4
snR45	snR45	SSF2	Q12153	453 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	YLR046C	Q12253	270 aa		0.03	□□□□□ -2.4
snR45	snR45	LDB17	Q12342	491 aa		0.03	□□□□□ -2.4
snR45	snR45	RRI2	Q12348	645 aa		0.03	□□□□□ -2.4
snR45	snR45	RTR2	Q12378	196 aa		0.03	□□□□□ -2.4
snR45	snR45	RVB2	Q12464	471 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	ARP6	Q12509	438 aa		0.03	□□□□□ -2.4
snR45	snR45	FOL3	Q12676	427 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	YOL087C	Q99247	1116 aa		0.03	□□□□□ -2.4
snR45	snR45	Q0144	Q9ZZW2	109 aa		0.03	□□□□□ -2.4
snR45	snR45	HEM4	P06174	275 aa		0.02	□□□□□ -2.41
snR45	snR45	RAD52	P06778	471 aa	Known RBP	0.02	□□□□□ -2.41
snR45	snR45	CDC21	P06785	304 aa		0.02	□□□□□ -2.41
snR45	snR45	CAR2	P07991	424 aa	Known RBP	0.02	□□□□□ -2.41
snR45	snR45	RPB2	P08518	1224 aa	Known RBP	0.02	□□□□□ -2.41
snR45	snR45	YFR010W-A	P0C5N0	62 aa		0.02	□□□□□ -2.41
snR45	snR45	YKR104W	P0CE69	306 aa		0.02	□□□□□ -2.41
snR45	snR45	YOL162W	P0CF19	215 aa		0.02	□□□□□ -2.41
snR45	snR45	SCH9	P11792	824 aa	Known RBP	0.02	□□□□□ -2.41
snR45	snR45	MRP7	P12687	371 aa		0.02	□□□□□ -2.41
snR45	snR45	GAL3	P13045	520 aa		0.02	□□□□□ -2.41
snR45	snR45	PCT1	P13259	424 aa		0.02	□□□□□ -2.41
snR45	snR45	MSI1	P13712	422 aa		0.02	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms