RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	SNT1	P25357	1226 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	RML2	P32611	393 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	CSE2	P33308	149 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	YHR054C	P38780	354 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	LYS1	P38998	373 aa	RIP-Chip data	0.8	□□□□□ -2.28	not detected
SEC8	YPR055W	BRO1	P48582	844 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	YGR250C	P53316	781 aa	Known RBP	0.8	□□□□□ -2.28
SEC8	YPR055W	MTM1	P53320	366 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	MDM1	Q01846	1127 aa		0.8	□□□□□ -2.28
SEC8	YPR055W	DIS3	Q08162	1001 aa	Known RBP	0.8	□□□□□ -2.28
SEC8	YPR055W	TOP1	P04786	769 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	SRV2	P17555	526 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	CRM1	P30822	1084 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	MUD1	P32605	298 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	YJR085C	P47131	105 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	IBD2	P53892	351 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	YLR152C	P54072	576 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	HAL1	Q01766	294 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	NUP116	Q02630	1113 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	OAZ1	Q02803	292 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	GIP3	Q03016	1276 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	BET5	Q03630	159 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	RRN11	Q04712	507 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	VAM3	Q12241	283 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	SOD1	P00445	154 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	NAM2	P11325	894 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	HIR2	P32480	875 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	REC114	P32841	428 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	HCS1	P34243	683 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	KKQ8	P36004	724 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	HEL1	P36113	551 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	DLD2	P46681	530 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	ECM27	P47144	725 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	YGL242C	P53066	181 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	SDT1	P53078	280 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	YNR048W	P53740	393 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	CWC25	P53854	179 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	BNI5	P53890	448 aa	Known RBP	0.79	□□□□□ -2.28
SEC8	YPR055W	ROY1	Q04847	553 aa		0.79	□□□□□ -2.28
SEC8	YPR055W	IMA3	P0CW40	589 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	IMA4	P0CW41	589 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	CLB3	P24870	427 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	ERV1	P27882	189 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	SIN4	P32259	974 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	SDH3	P33421	198 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	BYE1	P36106	594 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	RFC3	P38629	340 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	OTU2	P38747	307 aa	Known RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	REE1	P40893	198 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	YLR287C	Q05881	355 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	TSR2	Q06672	205 aa	Known RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	REX4	Q08237	289 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	IMA2	Q08295	589 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	AFI1	Q99222	893 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	YRF1-2	P40105	1681 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	ARG4	P04076	463 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	SPO7	P18410	259 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	FUR1	P18562	216 aa	Known RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	URA4	P20051	364 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	CLN1	P20437	546 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	LSB5	P25369	354 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	HXT1	P32465	570 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	YME2	P32843	850 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	APE3	P37302	537 aa	Known RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	RRT2	P38332	387 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	YGL138C	P53122	345 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	PEX25	Q02969	394 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	SNT309	Q06091	175 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC8	YPR055W	BSC6	Q08280	497 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	RMD5	Q12508	421 aa		0.78	□□□□□ -2.28
SEC8	YPR055W	HIS4	P00815	799 aa	Known RBP	0.78	□□□□□ -2.29
SEC8	YPR055W	CTR86	P25355	563 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	SPS22	P25380	463 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	POP5	P28005	173 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	PHO86	P46956	311 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	BTN2	P53286	410 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	GPI15	P53961	229 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	LIP2	Q06005	328 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	VTA1	Q06263	330 aa		0.78	□□□□□ -2.29
SEC8	YPR055W	WTM1	Q12363	437 aa	Known RBP	0.78	□□□□□ -2.29
SEC8	YPR055W	COX3	P00420	269 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	ARO2	P28777	376 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	MIG3	P39943	394 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	AIM10	P39965	576 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	YJR011C	P47086	261 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	RHO5	P53879	331 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	ADA2	Q02336	434 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	RSN1	Q03516	953 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	RRP45	Q05636	305 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	IZH2	Q12442	317 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	RTP1	Q12751	981 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	THO2	P53552	1597 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	CDC31	P06704	161 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	GPH1	P06738	902 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	SMY1	P32364	656 aa	Known RBP	0.77	□□□□□ -2.29
SEC8	YPR055W	SPR1	P32603	445 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	NPL6	P32832	435 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	YBR056W	P38081	501 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	SBE22	P38814	852 aa		0.77	□□□□□ -2.29
SEC8	YPR055W	SER3	P40054	469 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms