RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C GEX1P25596 615 aa7.14□□□□□ -1.27
RUP1YOR138C YCR016WP25617 290 aaKnown RBP7.14□□□□□ -1.27
RUP1YOR138C IDH2P28241 369 aaKnown RBP7.14□□□□□ -1.27
RUP1YOR138C ASF2P32448 525 aaPredicted RBP7.14□□□□□ -1.27
RUP1YOR138C GEX2P36173 615 aa7.14□□□□□ -1.27
RUP1YOR138C MUM2P38236 366 aa7.14□□□□□ -1.27
RUP1YOR138C PCL6P40038 420 aa7.14□□□□□ -1.27
RUP1YOR138C MRPL50P53724 139 aa7.14□□□□□ -1.27
RUP1YOR138C SNZ1Q03148 297 aa7.14□□□□□ -1.27
RUP1YOR138C YMR206WQ03695 313 aa7.14□□□□□ -1.27
RUP1YOR138C MRI1Q06489 411 aaKnown RBP7.14□□□□□ -1.27
RUP1YOR138C NDD1Q08887 554 aa7.14□□□□□ -1.27
RUP1YOR138C YDR061WQ12298 539 aa7.14□□□□□ -1.27
RUP1YOR138C STE3P06783 470 aa7.13□□□□□ -1.27
RUP1YOR138C ADE5,7P07244 802 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C LYP1P32487 611 aa7.13□□□□□ -1.27
RUP1YOR138C TOD6P34219 525 aa7.13□□□□□ -1.27
RUP1YOR138C YHR020WP38708 688 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C SSN3P39073 555 aa7.13□□□□□ -1.27
RUP1YOR138C TIM17P39515 158 aa7.13□□□□□ -1.27
RUP1YOR138C ISC1P40015 477 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C RRG9P40156 214 aa7.13□□□□□ -1.27
RUP1YOR138C SPO74P45819 413 aa7.13□□□□□ -1.27
RUP1YOR138C JHD2P47156 728 aaPredicted RBP7.13□□□□□ -1.27
RUP1YOR138C IPI3P53877 555 aa7.13□□□□□ -1.27
RUP1YOR138C RTN1Q04947 295 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C VPS74Q06385 345 aa7.13□□□□□ -1.27
RUP1YOR138C BUD7Q08754 746 aa7.13□□□□□ -1.27
RUP1YOR138C HAL9Q12180 1030 aa7.13□□□□□ -1.27
RUP1YOR138C MET2P08465 486 aa7.13□□□□□ -1.27
RUP1YOR138C RSC6P25632 483 aa7.13□□□□□ -1.27
RUP1YOR138C SPT14P32363 452 aa7.13□□□□□ -1.27
RUP1YOR138C LIP5P32875 414 aa7.13□□□□□ -1.27
RUP1YOR138C STS1P38637 319 aa7.13□□□□□ -1.27
RUP1YOR138C PRE6P40303 254 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C PAC11P40960 533 aa7.13□□□□□ -1.27
RUP1YOR138C YJR030CP47101 745 aa7.13□□□□□ -1.27
RUP1YOR138C MUP1P50276 574 aa7.13□□□□□ -1.27
RUP1YOR138C LSG1P53145 640 aaKnown RBP7.13□□□□□ -1.27
RUP1YOR138C GOR1P53839 350 aa7.13□□□□□ -1.27
RUP1YOR138C YAT1P80235 687 aa7.13□□□□□ -1.27
RUP1YOR138C SPO77Q06134 477 aa7.13□□□□□ -1.27
RUP1YOR138C TGL5Q12043 749 aa7.13□□□□□ -1.27
RUP1YOR138C NFI1Q12216 726 aa7.13□□□□□ -1.27
RUP1YOR138C YOR012WQ12351 137 aa7.13□□□□□ -1.27
RUP1YOR138C YBR298C-AQ8TGK4 73 aa7.13□□□□□ -1.27
RUP1YOR138C MET8P15807 274 aa7.12□□□□□ -1.27
RUP1YOR138C CAT2P32796 670 aaKnown RBP7.12□□□□□ -1.27
RUP1YOR138C ZRT3P34240 503 aa7.12□□□□□ -1.27
RUP1YOR138C MAC1P35192 417 aa7.12□□□□□ -1.27
RUP1YOR138C EDS1P38073 919 aa7.12□□□□□ -1.27
RUP1YOR138C INM1P38710 295 aa7.12□□□□□ -1.27
RUP1YOR138C SBE22P38814 852 aa7.12□□□□□ -1.27
RUP1YOR138C YKE4P40544 346 aa7.12□□□□□ -1.27
RUP1YOR138C MRH4P53166 561 aa7.12□□□□□ -1.27
RUP1YOR138C RTS3P53289 263 aa7.12□□□□□ -1.27
RUP1YOR138C IGO1P53897 168 aa7.12□□□□□ -1.27
RUP1YOR138C CIA1Q05583 330 aa7.12□□□□□ -1.27
RUP1YOR138C RRP45Q05636 305 aaKnown RBP7.12□□□□□ -1.27
RUP1YOR138C YLR036CQ07986 203 aa7.12□□□□□ -1.27
RUP1YOR138C RRT8Q08219 342 aa7.12□□□□□ -1.27
RUP1YOR138C YPQ1Q12010 308 aa7.12□□□□□ -1.27
RUP1YOR138C YTM1Q12024 460 aaPredicted RBP7.12□□□□□ -1.27
RUP1YOR138C RRP42Q12277 265 aaPredicted RBP7.12□□□□□ -1.27
RUP1YOR138C TSC13Q99190 310 aa7.12□□□□□ -1.27
RUP1YOR138C PDE2P06776 526 aa7.11□□□□□ -1.27
RUP1YOR138C TRM1P15565 570 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C MER1P16523 270 aa7.11□□□□□ -1.27
RUP1YOR138C SEC2P17065 759 aa7.11□□□□□ -1.27
RUP1YOR138C MDH1P17505 334 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
RUP1YOR138C PET9P18239 318 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C MNE1P24720 663 aa7.11□□□□□ -1.27
RUP1YOR138C PHO84P25297 587 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C BUD5P25300 642 aaPredicted RBP7.11□□□□□ -1.27
RUP1YOR138C SYP1P25623 870 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C RNP1P32385 249 aa7.11□□□□□ -1.27
RUP1YOR138C LHP1P33399 275 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C CBP4P37267 147 aa7.11□□□□□ -1.27
RUP1YOR138C YEL073CP39974 107 aa7.11□□□□□ -1.27
RUP1YOR138C LSM5P40089 93 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C RPL34BP40525 121 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C BPL1P48445 690 aaPredicted RBP7.11□□□□□ -1.27
RUP1YOR138C RIM21P48565 533 aa7.11□□□□□ -1.27
RUP1YOR138C SCW11P53189 542 aa7.11□□□□□ -1.27
RUP1YOR138C YGR015CP53208 328 aa7.11□□□□□ -1.27
RUP1YOR138C YNL034WP53963 612 aa7.11□□□□□ -1.27
RUP1YOR138C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
RUP1YOR138C NGL2Q03264 515 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C GAD1Q04792 585 aa7.11□□□□□ -1.27
RUP1YOR138C RQC1Q05468 723 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C ATG29Q12092 213 aa7.11□□□□□ -1.27
RUP1YOR138C GTT2Q12390 233 aa7.11□□□□□ -1.27
RUP1YOR138C HXT4P32467 576 aa7.11□□□□□ -1.27
RUP1YOR138C SPS19P32573 292 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C LRP1P38801 184 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C HXT6P39003 570 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C HXT7P39004 570 aa7.11□□□□□ -1.27
RUP1YOR138C YIL161WP40449 235 aaKnown RBP7.11□□□□□ -1.27
RUP1YOR138C MNT2P53059 558 aa7.11□□□□□ -1.27
RUP1YOR138C EMC4P53073 190 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 412.3 ms