RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C YCR051WP25631 222 aa2.63□□□□□ -1.99
SHE4YOR035C RIB5P38145 238 aa2.63□□□□□ -1.99
SHE4YOR035C LYS1P38998 373 aaRIP-Chip data2.63□□□□□ -1.99 RIP-Chip
SHE4YOR035C LSM5P40089 93 aaKnown RBP2.63□□□□□ -1.99
SHE4YOR035C YLR108CQ12259 485 aa2.63□□□□□ -1.99
SHE4YOR035C RRP12Q12754 1228 aaKnown RBP2.63□□□□□ -1.99
SHE4YOR035C KRE2P27809 442 aa2.63□□□□□ -1.99
SHE4YOR035C SIN4P32259 974 aa2.63□□□□□ -1.99
SHE4YOR035C PAD1P33751 242 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
SHE4YOR035C SPG5P42933 373 aa2.63□□□□□ -1.99
SHE4YOR035C NCA3P46955 337 aa2.63□□□□□ -1.99
SHE4YOR035C HMS2P47175 358 aa2.63□□□□□ -1.99
SHE4YOR035C COS5P47187 383 aa2.63□□□□□ -1.99
SHE4YOR035C YGR250CP53316 781 aaKnown RBP2.63□□□□□ -1.99
SHE4YOR035C KAP120Q02932 1032 aa2.63□□□□□ -1.99
SHE4YOR035C ROY1Q04847 553 aa2.63□□□□□ -1.99
SHE4YOR035C COS7Q07788 383 aa2.63□□□□□ -1.99
SHE4YOR035C AFI1Q99222 893 aa2.63□□□□□ -1.99
SHE4YOR035C SPT15P13393 240 aaKnown RBP2.62□□□□□ -1.99
SHE4YOR035C SEC63P14906 663 aa2.62□□□□□ -1.99
SHE4YOR035C RHB1P25378 209 aa2.62□□□□□ -1.99
SHE4YOR035C HIR2P32480 875 aa2.62□□□□□ -1.99
SHE4YOR035C STB6P36085 766 aa2.62□□□□□ -1.99
SHE4YOR035C MIX23P38162 196 aa2.62□□□□□ -1.99
SHE4YOR035C RFS1P38234 210 aaKnown RBP2.62□□□□□ -1.99
SHE4YOR035C MST28P39552 234 aa2.62□□□□□ -1.99
SHE4YOR035C FRE4P53746 719 aa2.62□□□□□ -1.99
SHE4YOR035C SKO1Q02100 647 aa2.62□□□□□ -1.99
SHE4YOR035C HEL2Q05580 639 aaKnown RBP2.62□□□□□ -1.99
SHE4YOR035C DON1Q05610 365 aa2.62□□□□□ -1.99
SHE4YOR035C TSR1Q07381 788 aaKnown RBP2.62□□□□□ -1.99
SHE4YOR035C ARG4P04076 463 aaPredicted RBP2.61□□□□□ -1.99
SHE4YOR035C SPS22P25380 463 aa2.61□□□□□ -1.99
SHE4YOR035C NAM9P27929 486 aa2.61□□□□□ -1.99
SHE4YOR035C YJR011CP47086 261 aaPredicted RBP2.61□□□□□ -1.99
SHE4YOR035C YGL242CP53066 181 aa2.61□□□□□ -1.99
SHE4YOR035C TOF1P53840 1238 aa2.61□□□□□ -1.99
SHE4YOR035C BNI5P53890 448 aaKnown RBP2.61□□□□□ -1.99
SHE4YOR035C ELP3Q02908 557 aaKnown RBP2.61□□□□□ -1.99
SHE4YOR035C RAD61Q99359 647 aa2.61□□□□□ -1.99
SHE4YOR035C URA4P20051 364 aa2.61□□□□□ -1.99
SHE4YOR035C TFB1P32776 642 aa2.61□□□□□ -1.99
SHE4YOR035C MMS4P38257 691 aa2.61□□□□□ -1.99
SHE4YOR035C SDS24P38314 527 aa2.61□□□□□ -1.99
SHE4YOR035C MTC6P38849 526 aa2.61□□□□□ -1.99
SHE4YOR035C BET5Q03630 159 aa2.61□□□□□ -1.99
SHE4YOR035C MDM30Q05930 598 aa2.61□□□□□ -1.99
SHE4YOR035C DIS3Q08162 1001 aaKnown RBP2.61□□□□□ -1.99
SHE4YOR035C SGT1Q08446 395 aa2.61□□□□□ -1.99
SHE4YOR035C ERV2Q12284 196 aa2.61□□□□□ -1.99
SHE4YOR035C TEF1P02994 458 aaKnown RBP2.6□□□□□ -1.99
SHE4YOR035C REV1P12689 985 aa2.6□□□□□ -1.99
SHE4YOR035C SLY1P22213 666 aa2.6□□□□□ -1.99
SHE4YOR035C SOR1P35497 357 aaKnown RBP2.6□□□□□ -1.99
SHE4YOR035C SWH1P35845 1188 aa2.6□□□□□ -1.99
SHE4YOR035C RFC3P38629 340 aa2.6□□□□□ -1.99
SHE4YOR035C PTH1P38876 190 aaKnown RBP2.6□□□□□ -1.99
SHE4YOR035C YNR048WP53740 393 aa2.6□□□□□ -1.99
SHE4YOR035C SOR2Q07786 357 aa2.6□□□□□ -1.99
SHE4YOR035C ORT1Q12375 292 aa2.6□□□□□ -1.99
SHE4YOR035C SCC2Q04002 1493 aa2.6□□□□□ -1.99
SHE4YOR035C DOP1Q03921 1698 aa2.6□□□□□ -1.99
SHE4YOR035C PDX1P16451 410 aa2.6□□□□□ -1.99
SHE4YOR035C SPO7P18410 259 aa2.6□□□□□ -1.99
SHE4YOR035C LSB5P25369 354 aa2.6□□□□□ -1.99
SHE4YOR035C SDH3P33421 198 aa2.6□□□□□ -1.99
SHE4YOR035C PHB2P50085 310 aa2.6□□□□□ -1.99
SHE4YOR035C PPM1Q04081 328 aa2.6□□□□□ -1.99
SHE4YOR035C RPC53P25441 422 aa2.59□□□□□ -1.99
SHE4YOR035C ADK2P26364 225 aa2.59□□□□□ -1.99
SHE4YOR035C BRF1P29056 596 aa2.59□□□□□ -1.99
SHE4YOR035C ITR1P30605 584 aa2.59□□□□□ -1.99
SHE4YOR035C KKQ8P36004 724 aa2.59□□□□□ -1.99
SHE4YOR035C PIM1P36775 1133 aa2.59□□□□□ -1.99
SHE4YOR035C PRM5P40476 318 aa2.59□□□□□ -1.99
SHE4YOR035C YMR130WQ04223 302 aa2.59□□□□□ -1.99
SHE4YOR035C SMA2Q04658 369 aa2.59□□□□□ -1.99
SHE4YOR035C SNX3Q08826 162 aaKnown RBP2.59□□□□□ -1.99
SHE4YOR035C ISN1Q99312 450 aa2.59□□□□□ -1.99
SHE4YOR035C CLN1P20437 546 aa2.59□□□□□ -2
SHE4YOR035C SNT1P25357 1226 aa2.59□□□□□ -2
SHE4YOR035C ARO2P28777 376 aaKnown RBP2.59□□□□□ -2
SHE4YOR035C FAA2P39518 744 aa2.59□□□□□ -2
SHE4YOR035C YGR210CP42942 411 aa2.59□□□□□ -2
SHE4YOR035C HXT11P54862 567 aa2.59□□□□□ -2
SHE4YOR035C ERB1Q04660 807 aaKnown RBP2.59□□□□□ -2
SHE4YOR035C RKM1Q08961 583 aaPredicted RBP2.59□□□□□ -2
SHE4YOR035C TRM732Q03496 1420 aa2.58□□□□□ -2
SHE4YOR035C ILV5P06168 395 aaKnown RBP2.58□□□□□ -2
SHE4YOR035C APE3P37302 537 aaKnown RBP2.58□□□□□ -2
SHE4YOR035C YMR181CQ03231 154 aa2.58□□□□□ -2
SHE4YOR035C RMT2Q03305 412 aa2.58□□□□□ -2
SHE4YOR035C RSN1Q03516 953 aa2.58□□□□□ -2
SHE4YOR035C DCS1Q06151 350 aa2.58□□□□□ -2
SHE4YOR035C TMS1Q12116 473 aa2.58□□□□□ -2
SHE4YOR035C NUP170P38181 1502 aa2.58□□□□□ -2
SHE4YOR035C TY2B-LR1P0C2J3 1770 aa2.58□□□□□ -2
SHE4YOR035C TY2B-FP0CX63 1770 aa2.58□□□□□ -2
SHE4YOR035C TY2B-GR2P0CX64 1770 aa2.58□□□□□ -2
SHE4YOR035C TY2B-CP25384 1770 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms