RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W VPS63O13549 108 aa2.1□□□□□ -2.07
RRP6YOR001W PUT4P15380 627 aa2.1□□□□□ -2.07
RRP6YOR001W MSS116P15424 664 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W CDC43P18898 376 aa2.1□□□□□ -2.07
RRP6YOR001W YCR007CP25354 239 aa2.1□□□□□ -2.07
RRP6YOR001W COQ3P27680 312 aa2.1□□□□□ -2.07
RRP6YOR001W NRP1P32770 719 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RRP6YOR001W RPT5P33297 434 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W SCD6P45978 349 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RRP6YOR001W GUF1P46943 645 aa2.1□□□□□ -2.07
RRP6YOR001W GCD14P46959 383 aaPredicted RBP2.1□□□□□ -2.07
RRP6YOR001W RRN5Q02983 363 aa2.1□□□□□ -2.07
RRP6YOR001W GIP3Q03016 1276 aa2.1□□□□□ -2.07
RRP6YOR001W RSC9Q03124 581 aa2.1□□□□□ -2.07
RRP6YOR001W THI20Q08224 551 aa2.1□□□□□ -2.07
RRP6YOR001W YLR112WQ12130 139 aa2.1□□□□□ -2.07
RRP6YOR001W RMD5Q12508 421 aa2.1□□□□□ -2.07
RRP6YOR001W RAD61Q99359 647 aa2.1□□□□□ -2.07
RRP6YOR001W RNR2P09938 399 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W RPS16AP0CX51 143 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W RPS16BP0CX52 143 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W THR4P16120 514 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W GID7P25569 745 aa2.1□□□□□ -2.07
RRP6YOR001W ECM25P32525 599 aa2.1□□□□□ -2.07
RRP6YOR001W TOA2P32774 122 aa2.1□□□□□ -2.07
RRP6YOR001W TOM71P38825 639 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W SPC97P38863 823 aa2.1□□□□□ -2.07
RRP6YOR001W SMC2P38989 1170 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W SEC27P41811 889 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W RTT102P53330 157 aa2.1□□□□□ -2.07
RRP6YOR001W GPI15P53961 229 aa2.1□□□□□ -2.07
RRP6YOR001W APM1Q00776 475 aaPredicted RBP2.1□□□□□ -2.07
RRP6YOR001W CTL1Q03220 320 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W NUP53Q03790 475 aa2.1□□□□□ -2.07
RRP6YOR001W YDR387CQ04162 555 aa2.1□□□□□ -2.07
RRP6YOR001W AFT2Q08957 416 aa2.1□□□□□ -2.07
RRP6YOR001W LSP1Q12230 341 aaKnown RBP2.1□□□□□ -2.07
RRP6YOR001W BNR1P40450 1375 aa2.09□□□□□ -2.07
RRP6YOR001W RPL12AP0CX53 165 aaKnown RBP2.09□□□□□ -2.07
RRP6YOR001W RPL12BP0CX54 165 aa2.09□□□□□ -2.07
RRP6YOR001W YER190C-BP0CX94 160 aa2.09□□□□□ -2.07
RRP6YOR001W YEL077W-AP0CX95 160 aa2.09□□□□□ -2.07
RRP6YOR001W YGR296C-BP0CX96 160 aa2.09□□□□□ -2.07
RRP6YOR001W YPL283W-BP0CX97 160 aa2.09□□□□□ -2.07
RRP6YOR001W YPR204C-AP0CX98 160 aa2.09□□□□□ -2.07
RRP6YOR001W SAM1P10659 382 aaKnown RBP2.09□□□□□ -2.07
RRP6YOR001W SEC62P21825 274 aa2.09□□□□□ -2.07
RRP6YOR001W RGT1P32862 1170 aa2.09□□□□□ -2.07
RRP6YOR001W PHD1P36093 366 aa2.09□□□□□ -2.07
RRP6YOR001W CBP4P37267 147 aa2.09□□□□□ -2.07
RRP6YOR001W INM1P38710 295 aa2.09□□□□□ -2.07
RRP6YOR001W AIM20P40451 204 aa2.09□□□□□ -2.07
RRP6YOR001W CDC40P40968 455 aaPredicted RBP2.09□□□□□ -2.07
RRP6YOR001W POP1P41812 875 aa2.09□□□□□ -2.07
RRP6YOR001W SPG5P42933 373 aa2.09□□□□□ -2.07
RRP6YOR001W NUP84P52891 726 aa2.09□□□□□ -2.07
RRP6YOR001W ATP23P53722 227 aa2.09□□□□□ -2.07
RRP6YOR001W URC2Q04411 772 aa2.09□□□□□ -2.07
RRP6YOR001W YMR034CQ05131 434 aaPredicted RBP2.09□□□□□ -2.07
RRP6YOR001W ECM7Q06200 448 aa2.09□□□□□ -2.07
RRP6YOR001W MCP2Q06567 569 aa2.09□□□□□ -2.07
RRP6YOR001W SSK1Q07084 712 aa2.09□□□□□ -2.07
RRP6YOR001W AAD15Q08361 143 aa2.09□□□□□ -2.07
RRP6YOR001W ATG34Q12292 412 aa2.09□□□□□ -2.07
RRP6YOR001W PFK27Q12471 397 aaPredicted RBP2.09□□□□□ -2.07
RRP6YOR001W HIS4P00815 799 aaKnown RBP2.09□□□□□ -2.08
RRP6YOR001W ERG11P10614 530 aa2.09□□□□□ -2.08
RRP6YOR001W GAL3P13045 520 aa2.09□□□□□ -2.08
RRP6YOR001W RPB8P20436 146 aa2.09□□□□□ -2.08
RRP6YOR001W ITR1P30605 584 aa2.09□□□□□ -2.08
RRP6YOR001W FRE1P32791 686 aa2.09□□□□□ -2.08
RRP6YOR001W COY1P34237 679 aa2.09□□□□□ -2.08
RRP6YOR001W STV1P37296 890 aa2.09□□□□□ -2.08
RRP6YOR001W YBL028CP38202 106 aa2.09□□□□□ -2.08
RRP6YOR001W KAP104P38217 918 aaKnown RBP2.09□□□□□ -2.08
RRP6YOR001W OSH3P38713 996 aaKnown RBP2.09□□□□□ -2.08
RRP6YOR001W PET100P38958 111 aa2.09□□□□□ -2.08
RRP6YOR001W PCF11P39081 626 aaPredicted RBP2.09□□□□□ -2.08
RRP6YOR001W YFR018CP43599 363 aa2.09□□□□□ -2.08
RRP6YOR001W GPI1P53306 609 aa2.09□□□□□ -2.08
RRP6YOR001W RPL15BP54780 204 aaPredicted RBP2.09□□□□□ -2.08
RRP6YOR001W SPO19Q03029 223 aa2.09□□□□□ -2.08
RRP6YOR001W IVY1Q04934 453 aa2.09□□□□□ -2.08
RRP6YOR001W YLR413WQ06689 675 aa2.09□□□□□ -2.08
RRP6YOR001W LDB17Q12342 491 aa2.09□□□□□ -2.08
RRP6YOR001W ARP6Q12509 438 aa2.09□□□□□ -2.08
RRP6YOR001W OPI3P05375 206 aa2.08□□□□□ -2.08
RRP6YOR001W SPO11P23179 398 aa2.08□□□□□ -2.08
RRP6YOR001W RAD57P25301 460 aa2.08□□□□□ -2.08
RRP6YOR001W HMX1P32339 317 aa2.08□□□□□ -2.08
RRP6YOR001W CYS4P32582 507 aaKnown RBP2.08□□□□□ -2.08
RRP6YOR001W SPT10P35208 640 aa2.08□□□□□ -2.08
RRP6YOR001W HSM3P38348 480 aa2.08□□□□□ -2.08
RRP6YOR001W DHH1P39517 506 aaKnown RBP2.08□□□□□ -2.08
RRP6YOR001W VPS52P39904 641 aa2.08□□□□□ -2.08
RRP6YOR001W LCP5P40079 357 aaPredicted RBP2.08□□□□□ -2.08
RRP6YOR001W SIM1P40472 476 aa2.08□□□□□ -2.08
RRP6YOR001W RTS2P40962 232 aa2.08□□□□□ -2.08
RRP6YOR001W PIB2P53191 635 aa2.08□□□□□ -2.08
RRP6YOR001W RRP46P53256 223 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms