RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	SER2	P42941	309 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	MRX6	P48564	524 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	KXD1	P53158	218 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	RPN14	P53196	417 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	TNA1	P53322	534 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	SSU72	P53538	206 aa	Predicted RBP	6.92	□□□□□ -1.3
MSB3	YNL293W	ARE2	P53629	642 aa	Known RBP	6.92	□□□□□ -1.3
MSB3	YNL293W	KTR6	P54070	446 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	CAC2	Q04199	468 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	GSF2	Q04697	403 aa	Known RBP	6.92	□□□□□ -1.3
MSB3	YNL293W	YOR378W	Q08902	515 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	SFM1	Q12314	213 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	PTC5	Q12511	572 aa		6.92	□□□□□ -1.3
MSB3	YNL293W	YLR462W	O13556	202 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SEC53	P07283	254 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	TRP4	P07285	380 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	NUC1	P08466	329 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	GID7	P25569	745 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	POF1	P25576	258 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	MRPL9	P31334	269 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	PRO3	P32263	286 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	RAD54	P32863	898 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YUH1	P35127	236 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	GPX2	P38143	162 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	VHC1	P38329	1120 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	MSC7	P38694	644 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	APM2	P38700	605 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YHL049C	P38722	271 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	PAC1	P39946	494 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	YEL075C	P39972	122 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	FAU1	P40099	211 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YER189W	P40104	122 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YFL064C	P43540	174 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YJR111C	P47148	283 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	VPS70	P47161	811 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SNN1	P48232	102 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	CPR8	P53728	308 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	DFG5	Q05031	458 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YPR127W	Q06494	345 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	TRE2	Q08693	809 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SCP1	Q08873	200 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SPC3	Q12133	184 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YOR022C	Q12204	715 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	VAM3	Q12241	283 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SPE4	Q12455	300 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	RGS2	Q99188	309 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	ATP1	P07251	545 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	RAD18	P10862	487 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	TCP1	P12612	559 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	MRP7	P12687	371 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	MET16	P18408	261 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	MCM10	P32354	571 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	SPR1	P32603	445 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	TSA1	P34760	196 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	SOP4	P39543	234 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	BUD13	P46947	266 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	RPA34	P47006	233 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	MOG1	P47123	218 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YJR154W	P47181	346 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YGL204C	P53089	101 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	IDP3	P53982	420 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	GAS2	Q06135	555 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	YDL129W	Q07555	291 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	KEL3	Q08979	651 aa	Predicted RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	YOP1	Q12402	180 aa		6.91	□□□□□ -1.3
MSB3	YNL293W	EFG1	Q3E705	233 aa	Known RBP	6.91	□□□□□ -1.3
MSB3	YNL293W	GCR1	P07261	785 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	DST1	P07273	309 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	PRB1	P09232	635 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	RPS1B	P23248	255 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	PRE7	P23724	241 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	RNA14	P25298	677 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	FAA1	P30624	700 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	RPS1A	P33442	255 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	RRT2	P38332	387 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	LAG1	P38703	411 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	NSG1	P38837	291 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	ACO2	P39533	789 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	SIP4	P46954	829 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	BNA1	P47096	177 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	YGL039W	P53183	348 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	JAC1	P53193	184 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	INN1	P53901	409 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	HXT11	P54862	567 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	RHO3	Q00245	231 aa	Known RBP	6.9	□□□□□ -1.3
MSB3	YNL293W	TIM44	Q01852	431 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	YPR014C	Q6B0W2	109 aa		6.9	□□□□□ -1.3
MSB3	YNL293W	TY1A-DR4	O74302	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	CIT2	P08679	460 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-A	P0CX57	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-PR1	P0CX58	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-OR	P0CX59	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-PR2	P0CX60	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-DR5	P0CX65	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-ER2	P0CX66	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-GR3	P0CX67	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-LR1	P0CX68	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-MR2	P0CX69	440 aa		6.89	□□□□□ -1.31
MSB3	YNL293W	TY1A-DR6	P0CX70	440 aa		6.89	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms