RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W GGA1Q06336 557 aa1.85□□□□□ -2.11
HSH155YMR288W LEA1Q08963 238 aaPredicted RBP1.85□□□□□ -2.11
HSH155YMR288W NUS1Q12063 375 aa1.85□□□□□ -2.11
HSH155YMR288W GLE1Q12315 538 aa1.85□□□□□ -2.11
HSH155YMR288W AVL9Q12500 764 aa1.85□□□□□ -2.11
HSH155YMR288W YLR302CO13544 120 aa1.85□□□□□ -2.11
HSH155YMR288W MRP2P10663 115 aaPredicted RBP1.85□□□□□ -2.11
HSH155YMR288W BIK1P11709 440 aa1.85□□□□□ -2.11
HSH155YMR288W DOA4P32571 926 aa1.85□□□□□ -2.11
HSH155YMR288W MRP4P32902 394 aa1.85□□□□□ -2.11
HSH155YMR288W UBP11P36026 717 aa1.85□□□□□ -2.11
HSH155YMR288W STB6P36085 766 aa1.85□□□□□ -2.11
HSH155YMR288W UBP13P38187 747 aa1.85□□□□□ -2.11
HSH155YMR288W ERC1P38767 581 aa1.85□□□□□ -2.11
HSH155YMR288W SMF1P38925 575 aa1.85□□□□□ -2.11
HSH155YMR288W YMR124WP39523 943 aaKnown RBP1.85□□□□□ -2.11
HSH155YMR288W ERV46P39727 415 aa1.85□□□□□ -2.11
HSH155YMR288W MET18P40469 1032 aa1.85□□□□□ -2.11
HSH155YMR288W IST3P40565 148 aaPredicted RBP1.85□□□□□ -2.11
HSH155YMR288W EFM3P47163 339 aa1.85□□□□□ -2.11
HSH155YMR288W LSC1P53598 329 aaKnown RBP1.85□□□□□ -2.11
HSH155YMR288W BSC5P53755 489 aa1.85□□□□□ -2.11
HSH155YMR288W YNL092WP53934 400 aa1.85□□□□□ -2.11
HSH155YMR288W BAG7Q12128 409 aa1.85□□□□□ -2.11
HSH155YMR288W GET3Q12154 354 aaKnown RBP1.85□□□□□ -2.11
HSH155YMR288W RPN5Q12250 445 aaKnown RBP1.85□□□□□ -2.11
HSH155YMR288W ARG81P05085 880 aa1.84□□□□□ -2.11
HSH155YMR288W ARG80P07249 177 aa1.84□□□□□ -2.11
HSH155YMR288W CAR2P07991 424 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W VPS3P23643 1011 aa1.84□□□□□ -2.11
HSH155YMR288W CRM1P30822 1084 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W MGM101P32787 269 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W SRB2P34162 210 aa1.84□□□□□ -2.11
HSH155YMR288W FLC2P39719 783 aa1.84□□□□□ -2.11
HSH155YMR288W BTT1P40314 149 aaPredicted RBP1.84□□□□□ -2.11
HSH155YMR288W UBP7P40453 1071 aa1.84□□□□□ -2.11
HSH155YMR288W ERG10P41338 398 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W BST1P43571 1029 aa1.84□□□□□ -2.11
HSH155YMR288W ROK1P45818 564 aaPredicted RBP1.84□□□□□ -2.11
HSH155YMR288W ARC1P46672 376 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W TRF5P48561 642 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W UBP8P50102 471 aa1.84□□□□□ -2.11
HSH155YMR288W CUL3P53202 744 aa1.84□□□□□ -2.11
HSH155YMR288W KTR6P54070 446 aa1.84□□□□□ -2.11
HSH155YMR288W ARX1Q03862 593 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W YAP7Q08182 245 aa1.84□□□□□ -2.11
HSH155YMR288W NBP2Q12163 236 aa1.84□□□□□ -2.11
HSH155YMR288W PRS5Q12265 496 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W HER1Q12276 1246 aa1.84□□□□□ -2.11
HSH155YMR288W CRC1Q12289 327 aa1.84□□□□□ -2.11
HSH155YMR288W GPM3Q12326 303 aa1.84□□□□□ -2.11
HSH155YMR288W TDH1P00360 332 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W COX4P04037 155 aa1.84□□□□□ -2.11
HSH155YMR288W MSF1P08425 469 aa1.84□□□□□ -2.11
HSH155YMR288W MDH1P17505 334 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
HSH155YMR288W CPR2P23285 205 aa1.84□□□□□ -2.11
HSH155YMR288W OCA4P25366 362 aa1.84□□□□□ -2.11
HSH155YMR288W COQ3P27680 312 aa1.84□□□□□ -2.11
HSH155YMR288W MSP1P28737 362 aa1.84□□□□□ -2.11
HSH155YMR288W SOF1P33750 489 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W BMH2P34730 273 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W SPC97P38863 823 aa1.84□□□□□ -2.11
HSH155YMR288W PFS1P38872 237 aa1.84□□□□□ -2.11
HSH155YMR288W MNL1P38888 796 aa1.84□□□□□ -2.11
HSH155YMR288W YJR061WP40355 935 aa1.84□□□□□ -2.11
HSH155YMR288W MET28P40573 187 aa1.84□□□□□ -2.11
HSH155YMR288W ALK1P43633 760 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W YGL138CP53122 345 aa1.84□□□□□ -2.11
HSH155YMR288W RTC4P53850 401 aa1.84□□□□□ -2.11
HSH155YMR288W MRPS17Q03246 237 aaPredicted RBP1.84□□□□□ -2.11
HSH155YMR288W INP2Q03824 705 aa1.84□□□□□ -2.11
HSH155YMR288W VPS20Q04272 221 aa1.84□□□□□ -2.11
HSH155YMR288W LEU9Q12166 604 aaKnown RBP1.84□□□□□ -2.11
HSH155YMR288W ARP6Q12509 438 aa1.84□□□□□ -2.11
HSH155YMR288W PRB1P09232 635 aa1.84□□□□□ -2.12
HSH155YMR288W BUD5P25300 642 aaPredicted RBP1.84□□□□□ -2.12
HSH155YMR288W MRP20P32387 263 aa1.84□□□□□ -2.12
HSH155YMR288W YME1P32795 747 aa1.84□□□□□ -2.12
HSH155YMR288W MSR1P38714 643 aa1.84□□□□□ -2.12
HSH155YMR288W VRG4P40107 337 aa1.84□□□□□ -2.12
HSH155YMR288W MSS2P40990 351 aa1.84□□□□□ -2.12
HSH155YMR288W IAH1P41734 238 aa1.84□□□□□ -2.12
HSH155YMR288W NPA3P47122 385 aa1.84□□□□□ -2.12
HSH155YMR288W HSH155P49955 971 aaKnown RBP1.84□□□□□ -2.12
HSH155YMR288W BIO3P50277 480 aa1.84□□□□□ -2.12
HSH155YMR288W COG1P53079 417 aa1.84□□□□□ -2.12
HSH155YMR288W SOV1Q04748 898 aa1.84□□□□□ -2.12
HSH155YMR288W PDR8Q06149 701 aa1.84□□□□□ -2.12
HSH155YMR288W LYS21Q12122 440 aaKnown RBP1.84□□□□□ -2.12
HSH155YMR288W BRR1Q99177 341 aaPredicted RBP1.84□□□□□ -2.12
HSH155YMR288W STE3P06783 470 aa1.83□□□□□ -2.12
HSH155YMR288W YAP1P19880 650 aaKnown RBP1.83□□□□□ -2.12
HSH155YMR288W PWP1P21304 576 aaKnown RBP1.83□□□□□ -2.12
HSH155YMR288W PHO84P25297 587 aaKnown RBP1.83□□□□□ -2.12
HSH155YMR288W MSN4P33749 630 aa1.83□□□□□ -2.12
HSH155YMR288W HES1P35843 434 aa1.83□□□□□ -2.12
HSH155YMR288W TPO5P36029 618 aa1.83□□□□□ -2.12
HSH155YMR288W SRO77P38163 1010 aa1.83□□□□□ -2.12
HSH155YMR288W MTW1P39731 289 aa1.83□□□□□ -2.12
HSH155YMR288W BNA3P47039 444 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms