RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W RAP1P11938 827 aa2.37□□□□□ -2.03
HRD3YLR207W PMR1P13586 950 aa2.37□□□□□ -2.03
HRD3YLR207W SPO11P23179 398 aa2.37□□□□□ -2.03
HRD3YLR207W SNT1P25357 1226 aa2.37□□□□□ -2.03
HRD3YLR207W SNU114P36048 1008 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W PIM1P36775 1133 aa2.37□□□□□ -2.03
HRD3YLR207W CTM1P38818 585 aa2.37□□□□□ -2.03
HRD3YLR207W MLH1P38920 769 aa2.37□□□□□ -2.03
HRD3YLR207W SSO2P39926 295 aa2.37□□□□□ -2.03
HRD3YLR207W EMC2P47133 292 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W SLD5Q03406 294 aa2.37□□□□□ -2.03
HRD3YLR207W EMI2Q04409 500 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W ECM18Q04623 453 aa2.37□□□□□ -2.03
HRD3YLR207W HRD3Q05787 833 aa2.37□□□□□ -2.03
HRD3YLR207W MSC3Q05812 728 aa2.37□□□□□ -2.03
HRD3YLR207W RRT8Q08219 342 aa2.37□□□□□ -2.03
HRD3YLR207W TOR2P32600 2474 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W DUR1,2P32528 1835 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W CAR1P00812 333 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W ILV1P00927 576 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W CDC37P06101 506 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W ADE5,7P07244 802 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W FRS2P15625 503 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W HIR2P32480 875 aa2.36□□□□□ -2.03
HRD3YLR207W EMP70P32802 667 aa2.36□□□□□ -2.03
HRD3YLR207W PXL1P36166 706 aa2.36□□□□□ -2.03
HRD3YLR207W KAP104P38217 918 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W VHC1P38329 1120 aa2.36□□□□□ -2.03
HRD3YLR207W TOM71P38825 639 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W VHS2P40463 436 aa2.36□□□□□ -2.03
HRD3YLR207W SDS3P40505 327 aa2.36□□□□□ -2.03
HRD3YLR207W ECM27P47144 725 aa2.36□□□□□ -2.03
HRD3YLR207W EFM3P47163 339 aa2.36□□□□□ -2.03
HRD3YLR207W LSB1P53281 241 aa2.36□□□□□ -2.03
HRD3YLR207W MPP6P53725 186 aaPredicted RBP2.36□□□□□ -2.03
HRD3YLR207W OCA2P53949 197 aa2.36□□□□□ -2.03
HRD3YLR207W YLR297WQ05899 129 aa2.36□□□□□ -2.03
HRD3YLR207W CYK3Q07533 885 aa2.36□□□□□ -2.03
HRD3YLR207W ULA1Q12059 462 aa2.36□□□□□ -2.03
HRD3YLR207W ARP6Q12509 438 aa2.36□□□□□ -2.03
HRD3YLR207W RHO2P06781 192 aa2.36□□□□□ -2.03
HRD3YLR207W SCH9P11792 824 aaKnown RBP2.36□□□□□ -2.03
HRD3YLR207W PMA2P19657 947 aa2.36□□□□□ -2.03
HRD3YLR207W COT1P32798 439 aa2.36□□□□□ -2.03
HRD3YLR207W KKQ8P36004 724 aa2.36□□□□□ -2.03
HRD3YLR207W CAB3P36076 571 aa2.36□□□□□ -2.03
HRD3YLR207W MNL1P38888 796 aa2.36□□□□□ -2.03
HRD3YLR207W YGL114WP53134 725 aa2.36□□□□□ -2.03
HRD3YLR207W ATC1Q04005 294 aa2.36□□□□□ -2.03
HRD3YLR207W GSH2Q08220 491 aa2.36□□□□□ -2.03
HRD3YLR207W ATG9Q12142 997 aa2.36□□□□□ -2.03
HRD3YLR207W HKR1P41809 1802 aa2.36□□□□□ -2.03
HRD3YLR207W LEU4P06208 619 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W PET111P08468 800 aa2.35□□□□□ -2.03
HRD3YLR207W COY1P34237 679 aa2.35□□□□□ -2.03
HRD3YLR207W ATP3P38077 311 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W TSC10P38342 320 aa2.35□□□□□ -2.03
HRD3YLR207W MSG5P38590 489 aa2.35□□□□□ -2.03
HRD3YLR207W YER130CP39959 443 aa2.35□□□□□ -2.03
HRD3YLR207W VAB2P40003 282 aa2.35□□□□□ -2.03
HRD3YLR207W CIN1P40987 1014 aa2.35□□□□□ -2.03
HRD3YLR207W ASN2P49090 572 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W YGL108CP53139 140 aa2.35□□□□□ -2.03
HRD3YLR207W ERG26P53199 349 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W GND2P53319 492 aa2.35□□□□□ -2.03
HRD3YLR207W APM1Q00776 475 aaPredicted RBP2.35□□□□□ -2.03
HRD3YLR207W YVH1Q02256 364 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W UTP6Q02354 440 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W YDR541CQ03049 344 aa2.35□□□□□ -2.03
HRD3YLR207W YMR178WQ03219 274 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W YMR160WQ03823 816 aa2.35□□□□□ -2.03
HRD3YLR207W GIS1Q03833 894 aa2.35□□□□□ -2.03
HRD3YLR207W TMN2Q04562 672 aa2.35□□□□□ -2.03
HRD3YLR207W SMA2Q04658 369 aa2.35□□□□□ -2.03
HRD3YLR207W COQ9Q05779 260 aa2.35□□□□□ -2.03
HRD3YLR207W YDL057WQ07379 328 aa2.35□□□□□ -2.03
HRD3YLR207W ETT1Q08421 412 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W SRN2Q99176 213 aa2.35□□□□□ -2.03
HRD3YLR207W TUS1Q06412 1307 aa2.35□□□□□ -2.03
HRD3YLR207W TDH1P00360 332 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W GPH1P06738 902 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W COR1P07256 457 aa2.35□□□□□ -2.03
HRD3YLR207W PUT2P07275 575 aa2.35□□□□□ -2.03
HRD3YLR207W GPA1P08539 472 aa2.35□□□□□ -2.03
HRD3YLR207W MER1P16523 270 aa2.35□□□□□ -2.03
HRD3YLR207W YCR006CP25350 157 aa2.35□□□□□ -2.03
HRD3YLR207W PET18P25362 215 aa2.35□□□□□ -2.03
HRD3YLR207W YUR1P26725 428 aa2.35□□□□□ -2.03
HRD3YLR207W BEM1P29366 551 aa2.35□□□□□ -2.03
HRD3YLR207W BMH2P34730 273 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W APD1P38281 316 aa2.35□□□□□ -2.03
HRD3YLR207W YIR014WP40570 242 aa2.35□□□□□ -2.03
HRD3YLR207W TDA10P42938 290 aa2.35□□□□□ -2.03
HRD3YLR207W ATG27P46989 271 aa2.35□□□□□ -2.03
HRD3YLR207W ORC5P50874 479 aa2.35□□□□□ -2.03
HRD3YLR207W LIF1P53150 421 aa2.35□□□□□ -2.03
HRD3YLR207W MPS2P53159 387 aa2.35□□□□□ -2.03
HRD3YLR207W PNC1P53184 216 aaKnown RBP2.35□□□□□ -2.03
HRD3YLR207W YGR126WP53274 230 aa2.35□□□□□ -2.03
HRD3YLR207W DUG3P53871 357 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms