RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SIP2	P34164	415 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	ROT2	P38138	954 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	PCF11	P39081	626 aa	Predicted RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	YJL070C	P40361	888 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	ARK1	P53974	638 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	THI7	Q05998	598 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	FMP45	Q07651	309 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	LYS2	P07702	1392 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	LEU4	P06208	619 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	ARO3	P14843	370 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	OPI1	P21957	404 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	RRP7	P25368	297 aa	Predicted RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	RDS1	P25611	832 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	FAA1	P30624	700 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	ZTA1	P38230	334 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	RXT2	P38255	430 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	VHC1	P38329	1120 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	RRP4	P38792	359 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	KEL1	P38853	1164 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	CHS6	P40955	746 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	ZIM17	P42844	174 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.41	□□□□□ -2.18	RIP-Chip
SMC4	YLR086W	YGL082W	P53155	381 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	YNR048W	P53740	393 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	YPL014W	Q02606	381 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	YDR541C	Q03049	344 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	NUP53	Q03790	475 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	GLO2	Q05584	274 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	MRPL51	Q06090	140 aa	Predicted RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	YLR112W	Q12130	139 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	ADE6	P38972	1358 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	COX3	P00420	269 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	RPL6B	P05739	176 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	MSS116	P15424	664 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	ERV1	P27882	189 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	BRF1	P29056	596 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	TOA2	P32774	122 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	APE3	P37302	537 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	YND1	P40009	630 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	SER3	P40054	469 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	PHO86	P46956	311 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	CAF130	P53280	1122 aa	Predicted RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	RPL6A	Q02326	176 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	MRP51	Q02950	344 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	RRB1	Q04225	511 aa	Known RBP	1.41	□□□□□ -2.18
SMC4	YLR086W	IVY1	Q04934	453 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	DCS1	Q06151	350 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	HIF1	Q12373	385 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	CEX1	Q12453	761 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	YBT1	P32386	1661 aa		1.41	□□□□□ -2.18
SMC4	YLR086W	PCA1	P38360	1216 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	YHR054C	P38780	354 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	BUD32	P53323	261 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	IBD2	P53892	351 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	IRC15	Q02733	499 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	AIM32	Q04689	311 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	PHO92	Q06390	306 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	GEP3	Q08622	556 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	RDR1	Q08904	546 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	GPM3	Q12326	303 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	PAR32	Q12515	295 aa	Known RBP	1.4	□□□□□ -2.18
SMC4	YLR086W	CTF3	Q12748	733 aa		1.4	□□□□□ -2.18
SMC4	YLR086W	PRP16	P15938	1071 aa	Predicted RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	SPS22	P25380	463 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	VPH1	P32563	840 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	PDR3	P33200	976 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	YNK1	P36010	153 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	MRPL4	P36517	319 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	MIX23	P38162	196 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	RRP3	P38712	501 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	RRF1	P38771	230 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	YHR122W	P38829	231 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	NAS2	P40555	220 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	RRT5	P43607	289 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	GPI15	P53961	229 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	DCI1	Q08558	271 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	DSE3	Q08729	430 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	BSC1	Q12140	328 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	RAD61	Q99359	647 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	PMR1	P13586	950 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	LSB5	P25369	354 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	TFB1	P32776	642 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	CBP4	P37267	147 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	STV1	P37296	890 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	ARC40	P38328	384 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	GND1	P38720	489 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	DOT5	P40553	215 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	TES1	P41903	349 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	LAM5	P43560	674 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	RPS0B	P46654	252 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	BRO1	P48582	844 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	ASN2	P49090	572 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	ART5	P53244	586 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	TOF1	P53840	1238 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	STP1	Q00947	519 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	YMR087W	Q04299	284 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	IPK1	Q06667	281 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	TPT1	Q12272	230 aa	Known RBP	1.4	□□□□□ -2.19
SMC4	YLR086W	SFG1	Q12507	346 aa		1.4	□□□□□ -2.19
SMC4	YLR086W	TY1B-JR2	P47100	1755 aa	Known RBP	1.4	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms