RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W PML1Q07930 204 aaPredicted RBP4.28□□□□□ -1.72
YJR028WYJR028W SFG1Q12507 346 aa4.28□□□□□ -1.72
YJR028WYJR028W RMD5Q12508 421 aa4.28□□□□□ -1.72
YJR028WYJR028W MRS3P10566 314 aa4.27□□□□□ -1.73
YJR028WYJR028W HSP104P31539 908 aaKnown RBP4.27□□□□□ -1.73
YJR028WYJR028W FRE2P36033 711 aa4.27□□□□□ -1.73
YJR028WYJR028W PES4P39684 611 aa4.27□□□□□ -1.73
YJR028WYJR028W TES1P41903 349 aaKnown RBP4.27□□□□□ -1.73
YJR028WYJR028W MDE1P47095 244 aa4.27□□□□□ -1.73
YJR028WYJR028W GPI15P53961 229 aa4.27□□□□□ -1.73
YJR028WYJR028W YDR541CQ03049 344 aa4.27□□□□□ -1.73
YJR028WYJR028W TFB5Q3E7C1 72 aaPredicted RBP4.27□□□□□ -1.73
YJR028WYJR028W PDE2P06776 526 aa4.26□□□□□ -1.73
YJR028WYJR028W TRX1P22217 103 aaKnown RBP4.26□□□□□ -1.73
YJR028WYJR028W YCR100CP25606 316 aa4.26□□□□□ -1.73
YJR028WYJR028W SEC1P30619 724 aaKnown RBP4.26□□□□□ -1.73
YJR028WYJR028W POP2P39008 433 aa4.26□□□□□ -1.73
YJR028WYJR028W DIM1P41819 318 aaKnown RBP4.26□□□□□ -1.73
YJR028WYJR028W PDR16P53860 351 aaKnown RBP4.26□□□□□ -1.73
YJR028WYJR028W UTP6Q02354 440 aaKnown RBP4.26□□□□□ -1.73
YJR028WYJR028W ODC1Q03028 310 aa4.26□□□□□ -1.73
YJR028WYJR028W YLR281CQ05863 155 aa4.26□□□□□ -1.73
YJR028WYJR028W SKI7Q08491 747 aaPredicted RBP4.26□□□□□ -1.73
YJR028WYJR028W REX3Q12090 404 aa4.26□□□□□ -1.73
YJR028WYJR028W ATG34Q12292 412 aa4.26□□□□□ -1.73
YJR028WYJR028W YDR061WQ12298 539 aa4.26□□□□□ -1.73
YJR028WYJR028W CYB2P00175 591 aa4.25□□□□□ -1.73
YJR028WYJR028W CHS1P08004 1131 aa4.25□□□□□ -1.73
YJR028WYJR028W IMA3P0CW40 589 aa4.25□□□□□ -1.73
YJR028WYJR028W IMA4P0CW41 589 aa4.25□□□□□ -1.73
YJR028WYJR028W UBA1P22515 1024 aaKnown RBP4.25□□□□□ -1.73
YJR028WYJR028W ITR1P30605 584 aa4.25□□□□□ -1.73
YJR028WYJR028W YNK1P36010 153 aaKnown RBP4.25□□□□□ -1.73
YJR028WYJR028W QDR3P38227 689 aa4.25□□□□□ -1.73
YJR028WYJR028W RRP3P38712 501 aaKnown RBP4.25□□□□□ -1.73
YJR028WYJR028W LYS1P38998 373 aaRIP-Chip data4.25□□□□□ -1.73not detected
YJR028WYJR028W RRT5P43607 289 aa4.25□□□□□ -1.73
YJR028WYJR028W EFM3P47163 339 aa4.25□□□□□ -1.73
YJR028WYJR028W ASN2P49090 572 aaKnown RBP4.25□□□□□ -1.73
YJR028WYJR028W SHE4P51534 789 aa4.25□□□□□ -1.73
YJR028WYJR028W YIP5P53108 310 aa4.25□□□□□ -1.73
YJR028WYJR028W ROG1P53118 685 aa4.25□□□□□ -1.73
YJR028WYJR028W PRO2P54885 456 aaKnown RBP4.25□□□□□ -1.73
YJR028WYJR028W IPK1Q06667 281 aa4.25□□□□□ -1.73
YJR028WYJR028W IMA2Q08295 589 aa4.25□□□□□ -1.73
YJR028WYJR028W RAD57P25301 460 aa4.24□□□□□ -1.73
YJR028WYJR028W PHO91P27514 894 aa4.24□□□□□ -1.73
YJR028WYJR028W NRP1P32770 719 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
YJR028WYJR028W INM1P38710 295 aa4.24□□□□□ -1.73
YJR028WYJR028W RTT107P38850 1070 aa4.24□□□□□ -1.73
YJR028WYJR028W MET30P39014 640 aa4.24□□□□□ -1.73
YJR028WYJR028W DHH1P39517 506 aaKnown RBP4.24□□□□□ -1.73
YJR028WYJR028W ELP2P42935 788 aa4.24□□□□□ -1.73
YJR028WYJR028W IKS1P47042 667 aa4.24□□□□□ -1.73
YJR028WYJR028W HMS2P47175 358 aa4.24□□□□□ -1.73
YJR028WYJR028W PIB2P53191 635 aa4.24□□□□□ -1.73
YJR028WYJR028W YNL143CP53908 130 aa4.24□□□□□ -1.73
YJR028WYJR028W YDR415CQ04033 374 aaPredicted RBP4.24□□□□□ -1.73
YJR028WYJR028W FMP42Q04991 504 aa4.24□□□□□ -1.73
YJR028WYJR028W NOP6Q07623 225 aaKnown RBP4.24□□□□□ -1.73
YJR028WYJR028W SRL1Q08673 210 aa4.24□□□□□ -1.73
YJR028WYJR028W YLL056CQ12177 298 aa4.24□□□□□ -1.73
YJR028WYJR028W NFT1P0CE68 1218 aa4.23□□□□□ -1.73
YJR028WYJR028W YAR066WP0CX18 203 aa4.23□□□□□ -1.73
YJR028WYJR028W YHR214WP0CX19 203 aa4.23□□□□□ -1.73
YJR028WYJR028W SPO12P17123 173 aa4.23□□□□□ -1.73
YJR028WYJR028W LSB5P25369 354 aa4.23□□□□□ -1.73
YJR028WYJR028W NDI1P32340 513 aa4.23□□□□□ -1.73
YJR028WYJR028W CYS4P32582 507 aaKnown RBP4.23□□□□□ -1.73
YJR028WYJR028W GLC7P32598 312 aaKnown RBP4.23□□□□□ -1.73
YJR028WYJR028W YSC83P32792 385 aa4.23□□□□□ -1.73
YJR028WYJR028W RSM22P36056 628 aa4.23□□□□□ -1.73
YJR028WYJR028W RIM2P38127 377 aa4.23□□□□□ -1.73
YJR028WYJR028W AVT4P50944 713 aa4.23□□□□□ -1.73
YJR028WYJR028W YNR048WP53740 393 aa4.23□□□□□ -1.73
YJR028WYJR028W YNR068CP53754 272 aa4.23□□□□□ -1.73
YJR028WYJR028W SNA4Q07549 140 aa4.23□□□□□ -1.73
YJR028WYJR028W SGT1Q08446 395 aa4.23□□□□□ -1.73
YJR028WYJR028W SRL2Q12020 392 aa4.23□□□□□ -1.73
YJR028WYJR028W YPR022CQ12139 1133 aa4.23□□□□□ -1.73
YJR028WYJR028W RNH203Q12338 110 aa4.23□□□□□ -1.73
YJR028WYJR028W SRN2Q99176 213 aa4.23□□□□□ -1.73
YJR028WYJR028W SCH9P11792 824 aaKnown RBP4.22□□□□□ -1.73
YJR028WYJR028W RNA14P25298 677 aaKnown RBP4.22□□□□□ -1.73
YJR028WYJR028W RDS1P25611 832 aa4.22□□□□□ -1.73
YJR028WYJR028W TIP1P27654 210 aaPredicted RBP4.22□□□□□ -1.73
YJR028WYJR028W CRM1P30822 1084 aaKnown RBP4.22□□□□□ -1.73
YJR028WYJR028W TRS65P32893 560 aa4.22□□□□□ -1.73
YJR028WYJR028W LOS1P33418 1100 aaPredicted RBP4.22□□□□□ -1.73
YJR028WYJR028W RRF1P38771 230 aa4.22□□□□□ -1.73
YJR028WYJR028W PCF11P39081 626 aaPredicted RBP4.22□□□□□ -1.73
YJR028WYJR028W SHO1P40073 367 aa4.22□□□□□ -1.73
YJR028WYJR028W YIL169CP40442 995 aa4.22□□□□□ -1.73
YJR028WYJR028W CUE3P53137 624 aaKnown RBP4.22□□□□□ -1.73
YJR028WYJR028W FRE4P53746 719 aa4.22□□□□□ -1.73
YJR028WYJR028W RSN1Q03516 953 aa4.22□□□□□ -1.73
YJR028WYJR028W NUP53Q03790 475 aa4.22□□□□□ -1.73
YJR028WYJR028W ERP1Q05359 219 aaKnown RBP4.22□□□□□ -1.73
YJR028WYJR028W REX4Q08237 289 aa4.22□□□□□ -1.73
YJR028WYJR028W NBL1Q3E7Y6 73 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms