RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C VID24P38263 362 aa2.81□□□□□ -1.96
PRP38YGR075C LYS1P38998 373 aaRIP-Chip data2.81□□□□□ -1.96not detected
PRP38YGR075C JJJ1P53863 590 aa2.81□□□□□ -1.96
PRP38YGR075C MDG1P53885 366 aa2.81□□□□□ -1.96
PRP38YGR075C RPT6Q01939 405 aaKnown RBP2.81□□□□□ -1.96
PRP38YGR075C CUE5Q08412 411 aaKnown RBP2.81□□□□□ -1.96
PRP38YGR075C ARG4P04076 463 aaPredicted RBP2.8□□□□□ -1.96
PRP38YGR075C UTP9P38882 575 aaKnown RBP2.8□□□□□ -1.96
PRP38YGR075C UTP18P40362 594 aaPredicted RBP2.8□□□□□ -1.96
PRP38YGR075C VTC2P43585 828 aa2.8□□□□□ -1.96
PRP38YGR075C YIF1P53845 314 aaKnown RBP2.8□□□□□ -1.96
PRP38YGR075C SGT1Q08446 395 aa2.8□□□□□ -1.96
PRP38YGR075C ORT1Q12375 292 aa2.8□□□□□ -1.96
PRP38YGR075C ARG3P05150 338 aa2.79□□□□□ -1.96
PRP38YGR075C RIP1P08067 215 aa2.79□□□□□ -1.96
PRP38YGR075C AIM10P39965 576 aaKnown RBP2.79□□□□□ -1.96
PRP38YGR075C SAS2P40963 338 aa2.79□□□□□ -1.96
PRP38YGR075C ARF3P40994 183 aaRIP-Chip data2.79□□□□□ -1.96not detected
PRP38YGR075C MRPL19P53875 158 aa2.79□□□□□ -1.96
PRP38YGR075C RNY1Q02933 434 aaKnown RBP2.79□□□□□ -1.96
PRP38YGR075C TAF11Q04226 346 aa2.79□□□□□ -1.96
PRP38YGR075C RQC1Q05468 723 aaKnown RBP2.79□□□□□ -1.96
PRP38YGR075C AHC1Q12433 566 aa2.79□□□□□ -1.96
PRP38YGR075C RMD5Q12508 421 aa2.79□□□□□ -1.96
PRP38YGR075C ILV5P06168 395 aaKnown RBP2.78□□□□□ -1.96
PRP38YGR075C PPH22P23595 377 aa2.78□□□□□ -1.96
PRP38YGR075C SNT1P25357 1226 aa2.78□□□□□ -1.96
PRP38YGR075C NPL6P32832 435 aa2.78□□□□□ -1.96
PRP38YGR075C CSE2P33308 149 aa2.78□□□□□ -1.96
PRP38YGR075C MID2P36027 376 aa2.78□□□□□ -1.96
PRP38YGR075C YHR054CP38780 354 aa2.78□□□□□ -1.96
PRP38YGR075C YJR085CP47131 105 aaKnown RBP2.78□□□□□ -1.96
PRP38YGR075C SCM3Q12334 223 aa2.78□□□□□ -1.96
PRP38YGR075C GPH1P06738 902 aaKnown RBP2.77□□□□□ -1.97
PRP38YGR075C CKA1P15790 372 aa2.77□□□□□ -1.97
PRP38YGR075C ROX1P25042 368 aa2.77□□□□□ -1.97
PRP38YGR075C RAD57P25301 460 aa2.77□□□□□ -1.97
PRP38YGR075C MPE1P35728 441 aaKnown RBP2.77□□□□□ -1.97
PRP38YGR075C GIR2Q03768 265 aaPredicted RBP2.77□□□□□ -1.97
PRP38YGR075C RIM20Q12033 661 aa2.77□□□□□ -1.97
PRP38YGR075C YRM1Q12340 786 aa2.77□□□□□ -1.97
PRP38YGR075C PGA3Q12746 312 aaKnown RBP2.77□□□□□ -1.97
PRP38YGR075C HXT3P32466 567 aaKnown RBP2.76□□□□□ -1.97
PRP38YGR075C VHC1P38329 1120 aa2.76□□□□□ -1.97
PRP38YGR075C RFC3P38629 340 aa2.76□□□□□ -1.97
PRP38YGR075C HMS2P47175 358 aa2.76□□□□□ -1.97
PRP38YGR075C AZR1P50080 613 aa2.76□□□□□ -1.97
PRP38YGR075C SPC19Q03954 165 aa2.76□□□□□ -1.97
PRP38YGR075C YLR287CQ05881 355 aa2.76□□□□□ -1.97
PRP38YGR075C MET17P06106 444 aa2.75□□□□□ -1.97
PRP38YGR075C RED1P14291 827 aa2.75□□□□□ -1.97
PRP38YGR075C CTR86P25355 563 aa2.75□□□□□ -1.97
PRP38YGR075C ERG3P32353 365 aa2.75□□□□□ -1.97
PRP38YGR075C NFU1P32860 256 aa2.75□□□□□ -1.97
PRP38YGR075C JLP2P40206 208 aa2.75□□□□□ -1.97
PRP38YGR075C BET5Q03630 159 aa2.75□□□□□ -1.97
PRP38YGR075C PLP2Q12017 286 aa2.75□□□□□ -1.97
PRP38YGR075C GRX6Q12438 231 aa2.75□□□□□ -1.97
PRP38YGR075C RTN2Q12443 393 aa2.75□□□□□ -1.97
PRP38YGR075C DNA2P38859 1522 aa2.74□□□□□ -1.97
PRP38YGR075C RPL3P14126 387 aaKnown RBP2.74□□□□□ -1.97
PRP38YGR075C SIN4P32259 974 aa2.74□□□□□ -1.97
PRP38YGR075C MIG3P39943 394 aa2.74□□□□□ -1.97
PRP38YGR075C YJR011CP47086 261 aaPredicted RBP2.74□□□□□ -1.97
PRP38YGR075C MDE1P47095 244 aa2.74□□□□□ -1.97
PRP38YGR075C RHO5P53879 331 aaKnown RBP2.74□□□□□ -1.97
PRP38YGR075C MDM30Q05930 598 aa2.74□□□□□ -1.97
PRP38YGR075C SIL1Q08199 421 aa2.74□□□□□ -1.97
PRP38YGR075C IZH2Q12442 317 aa2.74□□□□□ -1.97
PRP38YGR075C YBL111CQ3E7Y5 667 aa2.74□□□□□ -1.97
PRP38YGR075C HIR2P32480 875 aa2.73□□□□□ -1.97
PRP38YGR075C SMF1P38925 575 aa2.73□□□□□ -1.97
PRP38YGR075C BCH1Q05029 724 aa2.73□□□□□ -1.97
PRP38YGR075C SKI7Q08491 747 aaPredicted RBP2.73□□□□□ -1.97
PRP38YGR075C SFI1Q12369 946 aa2.73□□□□□ -1.97
PRP38YGR075C SPO12P17123 173 aa2.72□□□□□ -1.97
PRP38YGR075C FUR1P18562 216 aaKnown RBP2.72□□□□□ -1.97
PRP38YGR075C LSM5P40089 93 aaKnown RBP2.72□□□□□ -1.97
PRP38YGR075C YGR250CP53316 781 aaKnown RBP2.72□□□□□ -1.97
PRP38YGR075C REX4Q08237 289 aa2.72□□□□□ -1.97
PRP38YGR075C RRG1Q12167 365 aaPredicted RBP2.72□□□□□ -1.97
PRP38YGR075C NAM2P11325 894 aa2.71□□□□□ -1.98
PRP38YGR075C PHB2P50085 310 aa2.71□□□□□ -1.98
PRP38YGR075C GPI15P53961 229 aa2.71□□□□□ -1.98
PRP38YGR075C RPA49Q01080 415 aaPredicted RBP2.71□□□□□ -1.98
PRP38YGR075C YOL159C-AQ3E769 90 aa2.71□□□□□ -1.98
PRP38YGR075C SPA2P23201 1466 aaKnown RBP2.71□□□□□ -1.98
PRP38YGR075C KRE2P27809 442 aa2.7□□□□□ -1.98
PRP38YGR075C RML2P32611 393 aa2.7□□□□□ -1.98
PRP38YGR075C BYE1P36106 594 aa2.7□□□□□ -1.98
PRP38YGR075C ARA1P38115 344 aa2.7□□□□□ -1.98
PRP38YGR075C RTC2P38279 296 aa2.7□□□□□ -1.98
PRP38YGR075C OTU2P38747 307 aaKnown RBP2.7□□□□□ -1.98
PRP38YGR075C PCF11P39081 626 aaPredicted RBP2.7□□□□□ -1.98
PRP38YGR075C DFG10P40526 253 aa2.7□□□□□ -1.98
PRP38YGR075C VTA1Q06263 330 aa2.7□□□□□ -1.98
PRP38YGR075C CCH1P50077 2039 aa2.69□□□□□ -1.98
PRP38YGR075C CLB3P24870 427 aa2.69□□□□□ -1.98
PRP38YGR075C RPC53P25441 422 aa2.69□□□□□ -1.98
PRP38YGR075C GEX1P25596 615 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms