RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	MTR3	P48240	250 aa	Predicted RBP	5.47	□□□□□ -1.53
ATG12	YBR217W	YGR012W	P53206	393 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	UBP2	Q01476	1272 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	OAZ1	Q02803	292 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	YPL071C	Q02864	156 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	VPS16	Q03308	798 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	EFR3	Q03653	782 aa	Known RBP	5.47	□□□□□ -1.53
ATG12	YBR217W	YMR010W	Q03687	405 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	GAD1	Q04792	585 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	DFG5	Q05031	458 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	VPS74	Q06385	345 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	YLR413W	Q06689	675 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	BDS1	Q08347	646 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	RRP36	Q12481	300 aa	Predicted RBP	5.47	□□□□□ -1.53
ATG12	YBR217W	SNF8	Q12483	233 aa		5.47	□□□□□ -1.53
ATG12	YBR217W	MRP13	P12686	339 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	SLY41	P22215	453 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	ARE1	P25628	610 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	PHO91	P27514	894 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	MKK2	P32491	506 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	SEC61	P32915	480 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	GLG1	P36143	616 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	MRPL17	P36528	281 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.46	□□□□□ -1.54	not detected
ATG12	YBR217W	GDT1	P38301	280 aa	Predicted RBP	5.46	□□□□□ -1.54
ATG12	YBR217W	AIM2	P39721	246 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	MRX1	P40050	688 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	UTP25	P40498	721 aa	Known RBP	5.46	□□□□□ -1.54
ATG12	YBR217W	CCT7	P42943	550 aa	Known RBP	5.46	□□□□□ -1.54
ATG12	YBR217W	USE1	P53146	245 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	GOR1	P53839	350 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	YML119W	Q03208	357 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	ISR1	Q06098	443 aa	Known RBP	5.46	□□□□□ -1.54
ATG12	YBR217W	YOL131W	Q08270	108 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	NSI1	Q12457	570 aa		5.46	□□□□□ -1.54
ATG12	YBR217W	COX1	P00401	534 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	UNG1	P12887	359 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	CDC26	P14724	124 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	PRP4	P20053	465 aa	Known RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	APN1	P22936	367 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	RVS161	P25343	265 aa	Known RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	TOA1	P32773	286 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	DOA1	P36037	715 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	GAB1	P41733	394 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	BAP3	P41815	604 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	PSA1	P41940	361 aa	Known RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	TIM54	P47045	478 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	CDH1	P53197	566 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	ATF2	P53296	535 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	ARC35	P53731	342 aa	Known RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	RHO4	Q00246	291 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	MDM30	Q05930	598 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	YPR174C	Q06616	221 aa	Predicted RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	NBA1	Q08229	501 aa	Known RBP	5.45	□□□□□ -1.54
ATG12	YBR217W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
ATG12	YBR217W	HSP42	Q12329	375 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	YOR019W	Q99248	730 aa		5.45	□□□□□ -1.54
ATG12	YBR217W	YPT1	P01123	206 aa	Known RBP	5.44	□□□□□ -1.54
ATG12	YBR217W	CBP2	P03874	630 aa	Predicted RBP	5.44	□□□□□ -1.54
ATG12	YBR217W	YJU2	P28320	278 aa	Predicted RBP	5.44	□□□□□ -1.54
ATG12	YBR217W	CTS1	P29029	562 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	DGR2	P32330	852 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	SSH4	P32343	579 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	PTR2	P32901	601 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	SPC42	P36094	363 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	TSC10	P38342	320 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	STP2	P38704	541 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	VPS52	P39904	641 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	RGI1	P40043	161 aa	Predicted RBP	5.44	□□□□□ -1.54
ATG12	YBR217W	HPM1	P40481	377 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	LCL3	P53153	274 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	COG2	P53271	262 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	SNP1	Q00916	300 aa	Predicted RBP	5.44	□□□□□ -1.54
ATG12	YBR217W	YPR202W	Q08993	238 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	MMP1	Q12372	583 aa		5.44	□□□□□ -1.54
ATG12	YBR217W	ARG3	P05150	338 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	RAP1	P11938	827 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	CBS2	P14905	389 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	DAP2	P18962	818 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	CPR3	P25719	182 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	CMK1	P27466	446 aa	Known RBP	5.43	□□□□□ -1.54
ATG12	YBR217W	DCG1	P32460	244 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	ORC2	P32833	620 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	SEF1	P34228	1148 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	CUE2	P36075	443 aa	Known RBP	5.43	□□□□□ -1.54
ATG12	YBR217W	TRM5	P38793	499 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	GIP2	P40036	548 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	LAS21	P40367	830 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	ICE2	P40499	491 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	CUP9	P41817	306 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	MAL11	P53048	616 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	SUR7	P54003	302 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	RPM2	Q02773	1202 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	GMC2	Q06201	188 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	TPO4	Q12256	659 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	RPN6	Q12377	434 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	SKS1	Q12505	502 aa		5.43	□□□□□ -1.54
ATG12	YBR217W	ATP6	P00854	259 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	GLK1	P17709	500 aa	Known RBP	5.42	□□□□□ -1.54
ATG12	YBR217W	STP22	P25604	385 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms