RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR78, Length 87 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR78	snR78	RAD14	P28519	371 aa		4.12	□□□□□ -1.75
snR78	snR78	RMD9	P53140	646 aa	Known RBP	4.12	□□□□□ -1.75
snR78	snR78	YPR022C	Q12139	1133 aa		4.12	□□□□□ -1.75
snR78	snR78	IDH2	P28241	369 aa	Known RBP	4.11	□□□□□ -1.75
snR78	snR78	YEL057C	P39983	233 aa		4.11	□□□□□ -1.75
snR78	snR78	YGR149W	P48236	432 aa		4.11	□□□□□ -1.75
snR78	snR78	MTM1	P53320	366 aa		4.11	□□□□□ -1.75
snR78	snR78	YDR387C	Q04162	555 aa		4.11	□□□□□ -1.75
snR78	snR78	TAP42	Q04372	366 aa		4.11	□□□□□ -1.75
snR78	snR78	YDL012C	Q12489	107 aa		4.11	□□□□□ -1.75
snR78	snR78	YML133C	Q03099	1374 aa		4.11	□□□□□ -1.75
snR78	snR78	YLL067C	Q07888	1374 aa		4.11	□□□□□ -1.75
snR78	snR78	YLL066C	Q99208	1374 aa		4.11	□□□□□ -1.75
snR78	snR78	SPB1	P25582	841 aa	Predicted RBP	4.1	□□□□□ -1.75
snR78	snR78	YMR181C	Q03231	154 aa		4.1	□□□□□ -1.75
snR78	snR78	TSA2	Q04120	196 aa		4.1	□□□□□ -1.75
snR78	snR78	TRP1	P00912	224 aa		4.09	□□□□□ -1.75
snR78	snR78	TOP1	P04786	769 aa		4.09	□□□□□ -1.75
snR78	snR78	NFT1	P0CE68	1218 aa		4.09	□□□□□ -1.75
snR78	snR78	SLY1	P22213	666 aa		4.09	□□□□□ -1.75
snR78	snR78	OCA4	P25366	362 aa		4.09	□□□□□ -1.75
snR78	snR78	ECM25	P32525	599 aa		4.09	□□□□□ -1.75
snR78	snR78	MRPL10	P36520	322 aa		4.09	□□□□□ -1.75
snR78	snR78	SLX1	P38324	304 aa		4.09	□□□□□ -1.75
snR78	snR78	FDH1	Q08911	376 aa		4.09	□□□□□ -1.75
snR78	snR78	PMT1	P33775	817 aa		4.08	□□□□□ -1.76
snR78	snR78	HCS1	P34243	683 aa		4.08	□□□□□ -1.76
snR78	snR78	CMC1	P36064	111 aa		4.08	□□□□□ -1.76
snR78	snR78	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
snR78	snR78	TFG2	P41896	400 aa	Predicted RBP	4.08	□□□□□ -1.76
snR78	snR78	ECM27	P47144	725 aa		4.08	□□□□□ -1.76
snR78	snR78	RPT6	Q01939	405 aa	Known RBP	4.08	□□□□□ -1.76
snR78	snR78	HSP31	Q04432	237 aa		4.08	□□□□□ -1.76
snR78	snR78	MRD1	Q06106	887 aa	Known RBP	4.08	□□□□□ -1.76
snR78	snR78	ITR1	P30605	584 aa		4.07	□□□□□ -1.76
snR78	snR78	APE2	P32454	952 aa	Known RBP	4.07	□□□□□ -1.76
snR78	snR78	FRE4	P53746	719 aa		4.07	□□□□□ -1.76
snR78	snR78	SNX3	Q08826	162 aa	Known RBP	4.07	□□□□□ -1.76
snR78	snR78	ATG29	Q12092	213 aa		4.07	□□□□□ -1.76
snR78	snR78	GFD2	P25370	566 aa	Known RBP	4.06	□□□□□ -1.76
snR78	snR78	PRP21	P32524	280 aa	Predicted RBP	4.06	□□□□□ -1.76
snR78	snR78	CCT2	P39076	527 aa	Known RBP	4.06	□□□□□ -1.76
snR78	snR78	ARE2	P53629	642 aa	Known RBP	4.06	□□□□□ -1.76
snR78	snR78	YIF1	P53845	314 aa	Known RBP	4.06	□□□□□ -1.76
snR78	snR78	KTR5	P53966	522 aa	Predicted RBP	4.06	□□□□□ -1.76
snR78	snR78	IRC25	Q07951	179 aa		4.06	□□□□□ -1.76
snR78	snR78	MUD1	P32605	298 aa	Known RBP	4.05	□□□□□ -1.76
snR78	snR78	SEC66	P33754	206 aa		4.05	□□□□□ -1.76
snR78	snR78	YBR137W	P38276	179 aa		4.05	□□□□□ -1.76
snR78	snR78	HXT14	P42833	540 aa		4.05	□□□□□ -1.76
snR78	snR78	HIS4	P00815	799 aa	Known RBP	4.04	□□□□□ -1.76
snR78	snR78	TEF1	P02994	458 aa	Known RBP	4.04	□□□□□ -1.76
snR78	snR78	RPI1	P23250	407 aa	Known RBP	4.04	□□□□□ -1.76
snR78	snR78	POP5	P28005	173 aa		4.04	□□□□□ -1.76
snR78	snR78	NIP100	P33420	868 aa		4.04	□□□□□ -1.76
snR78	snR78	VID24	P38263	362 aa		4.04	□□□□□ -1.76
snR78	snR78	BRO1	P48582	844 aa		4.04	□□□□□ -1.76
snR78	snR78	YNR048W	P53740	393 aa		4.04	□□□□□ -1.76
snR78	snR78	GIR2	Q03768	265 aa	Predicted RBP	4.04	□□□□□ -1.76
snR78	snR78	YLR278C	Q05854	1341 aa		4.03	□□□□□ -1.76
snR78	snR78	ARG4	P04076	463 aa	Predicted RBP	4.03	□□□□□ -1.76
snR78	snR78	SPS4	P09937	338 aa		4.03	□□□□□ -1.76
snR78	snR78	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
snR78	snR78	KKQ8	P36004	724 aa		4.03	□□□□□ -1.76
snR78	snR78	YHR131C	P38835	850 aa		4.03	□□□□□ -1.76
snR78	snR78	LYS1	P38998	373 aa	RIP-Chip data	4.03	□□□□□ -1.76	not detected
snR78	snR78	SPO22	P40511	975 aa		4.03	□□□□□ -1.76
snR78	snR78	SNT1	P25357	1226 aa		4.02	□□□□□ -1.77
snR78	snR78	NUP2	P32499	720 aa		4.02	□□□□□ -1.77
snR78	snR78	MID2	P36027	376 aa		4.02	□□□□□ -1.77
snR78	snR78	SSU1	P41930	458 aa		4.01	□□□□□ -1.77
snR78	snR78	VTC2	P43585	828 aa		4.01	□□□□□ -1.77
snR78	snR78	RIM20	Q12033	661 aa		4.01	□□□□□ -1.77
snR78	snR78	FAB1	P34756	2278 aa		4	□□□□□ -1.77
snR78	snR78	CYC3	P06182	269 aa		4	□□□□□ -1.77
snR78	snR78	MET8	P15807	274 aa		4	□□□□□ -1.77
snR78	snR78	ESL1	P40456	1118 aa		4	□□□□□ -1.77
snR78	snR78	VMA13	P41807	478 aa	Known RBP	4	□□□□□ -1.77
snR78	snR78	RNY1	Q02933	434 aa	Known RBP	4	□□□□□ -1.77
snR78	snR78	GPI10	P30777	616 aa		3.99	□□□□□ -1.77
snR78	snR78	VHC1	P38329	1120 aa		3.99	□□□□□ -1.77
snR78	snR78	YHR054C	P38780	354 aa		3.99	□□□□□ -1.77
snR78	snR78	GAB1	P41733	394 aa		3.99	□□□□□ -1.77
snR78	snR78	CUE5	Q08412	411 aa	Known RBP	3.99	□□□□□ -1.77
snR78	snR78	SGT1	Q08446	395 aa		3.99	□□□□□ -1.77
snR78	snR78	GPH1	P06738	902 aa	Known RBP	3.98	□□□□□ -1.77
snR78	snR78	KAR9	P32526	644 aa		3.98	□□□□□ -1.77
snR78	snR78	MET18	P40469	1032 aa		3.98	□□□□□ -1.77
snR78	snR78	SAS2	P40963	338 aa		3.98	□□□□□ -1.77
snR78	snR78	REX4	Q08237	289 aa		3.98	□□□□□ -1.77
snR78	snR78	YRM1	Q12340	786 aa		3.98	□□□□□ -1.77
snR78	snR78	ORT1	Q12375	292 aa		3.98	□□□□□ -1.77
snR78	snR78	ARG3	P05150	338 aa		3.97	□□□□□ -1.77
snR78	snR78	PPH22	P23595	377 aa		3.97	□□□□□ -1.77
snR78	snR78	NPL6	P32832	435 aa		3.97	□□□□□ -1.77
snR78	snR78	CSE2	P33308	149 aa		3.97	□□□□□ -1.77
snR78	snR78	UTP18	P40362	594 aa	Predicted RBP	3.97	□□□□□ -1.77
snR78	snR78	HMS2	P47175	358 aa		3.97	□□□□□ -1.77
snR78	snR78	BET5	Q03630	159 aa		3.97	□□□□□ -1.77
snR78	snR78	IMH1	Q06704	911 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms