RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W MFB1Q04922 465 aa0.03□□□□□ -2.4
RDS3YPR094W YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.03□□□□□ -2.4not detected
RDS3YPR094W TIM18Q08749 192 aa0.03□□□□□ -2.4
RDS3YPR094W CTI6Q08923 506 aa0.03□□□□□ -2.4
RDS3YPR094W YPR022CQ12139 1133 aa0.03□□□□□ -2.4
RDS3YPR094W TIR4Q12218 487 aaPredicted RBP0.03□□□□□ -2.4
RDS3YPR094W PKH2Q12236 1081 aaKnown RBP0.03□□□□□ -2.4
RDS3YPR094W JID1Q12350 301 aa0.03□□□□□ -2.4
RDS3YPR094W TPI1P00942 248 aaKnown RBP0.02□□□□□ -2.41
RDS3YPR094W MF(ALPHA)1P01149 165 aa0.02□□□□□ -2.41
RDS3YPR094W PRP2P20095 876 aaPredicted RBP0.02□□□□□ -2.41
RDS3YPR094W APE2P32454 952 aaKnown RBP0.02□□□□□ -2.41
RDS3YPR094W YHL041WP38730 149 aa0.02□□□□□ -2.41
RDS3YPR094W FHL1P39521 936 aa0.02□□□□□ -2.41
RDS3YPR094W MBB1P39534 108 aa0.02□□□□□ -2.41
RDS3YPR094W YMR147WP40218 223 aaKnown RBP0.02□□□□□ -2.41
RDS3YPR094W POP1P41812 875 aa0.02□□□□□ -2.41
RDS3YPR094W BIR1P47134 954 aa0.02□□□□□ -2.41
RDS3YPR094W AAD10P47182 288 aa0.02□□□□□ -2.41
RDS3YPR094W SSN8P47821 323 aa0.02□□□□□ -2.41
RDS3YPR094W YIP1P53039 248 aa0.02□□□□□ -2.41
RDS3YPR094W LCL3P53153 274 aa0.02□□□□□ -2.41
RDS3YPR094W ARE2P53629 642 aaKnown RBP0.02□□□□□ -2.41
RDS3YPR094W HST4P53688 370 aa0.02□□□□□ -2.41
RDS3YPR094W KTR6P54070 446 aa0.02□□□□□ -2.41
RDS3YPR094W MET14Q02196 202 aa0.02□□□□□ -2.41
RDS3YPR094W LUC7Q07508 261 aaPredicted RBP0.02□□□□□ -2.41
RDS3YPR094W TRM8Q12009 286 aa0.02□□□□□ -2.41
RDS3YPR094W SMF3Q12078 473 aaPredicted RBP0.02□□□□□ -2.41
RDS3YPR094W FOL3Q12676 427 aaPredicted RBP0.02□□□□□ -2.41
RDS3YPR094W COR1P07256 457 aa0.01□□□□□ -2.41
RDS3YPR094W MSI1P13712 422 aa0.01□□□□□ -2.41
RDS3YPR094W PRR1P28708 518 aa0.01□□□□□ -2.41
RDS3YPR094W MKK1P32490 508 aa0.01□□□□□ -2.41
RDS3YPR094W PPQ1P32945 549 aa0.01□□□□□ -2.41
RDS3YPR094W AST1P35183 429 aa0.01□□□□□ -2.41
RDS3YPR094W TEF4P36008 412 aaKnown RBP0.01□□□□□ -2.41
RDS3YPR094W SDH4P37298 181 aa0.01□□□□□ -2.41
RDS3YPR094W MAL33P38157 468 aa0.01□□□□□ -2.41
RDS3YPR094W CHL4P38907 458 aa0.01□□□□□ -2.41
RDS3YPR094W SCC4P40090 624 aa0.01□□□□□ -2.41
RDS3YPR094W EGT2P42835 1041 aa0.01□□□□□ -2.41
RDS3YPR094W ATG18P43601 500 aa0.01□□□□□ -2.41
RDS3YPR094W YFR057WP43625 151 aa0.01□□□□□ -2.41
RDS3YPR094W BNA1P47096 177 aa0.01□□□□□ -2.41
RDS3YPR094W MTQ1P53944 314 aa0.01□□□□□ -2.41
RDS3YPR094W NUP116Q02630 1113 aa0.01□□□□□ -2.41
RDS3YPR094W RIF2Q06208 395 aa0.01□□□□□ -2.41
RDS3YPR094W PLB3Q08108 686 aa0.01□□□□□ -2.41
RDS3YPR094W TCO89Q08921 799 aa0.01□□□□□ -2.41
RDS3YPR094W SGS1P35187 1447 aa0.01□□□□□ -2.41
RDS3YPR094W RPS19AP07280 144 aaKnown RBP0□□□□□ -2.41
RDS3YPR094W RPS19BP07281 144 aaPredicted RBP0□□□□□ -2.41
RDS3YPR094W PHO84P25297 587 aaKnown RBP0□□□□□ -2.41
RDS3YPR094W PTP2P29461 750 aa0□□□□□ -2.41
RDS3YPR094W CNS1P33313 385 aa0□□□□□ -2.41
RDS3YPR094W SRB2P34162 210 aa0□□□□□ -2.41
RDS3YPR094W AUR1P36107 401 aaPredicted RBP0□□□□□ -2.41
RDS3YPR094W ATG12P38316 186 aa0□□□□□ -2.41
RDS3YPR094W ERP2P39704 215 aa0□□□□□ -2.41
RDS3YPR094W JLP2P40206 208 aa0□□□□□ -2.41
RDS3YPR094W YIR035CP40579 254 aa0□□□□□ -2.41
RDS3YPR094W IGD1P43598 195 aa0□□□□□ -2.41
RDS3YPR094W URB2P47108 1174 aa0□□□□□ -2.41
RDS3YPR094W OCA1P50946 238 aaPredicted RBP0□□□□□ -2.41
RDS3YPR094W TAN1P53072 289 aaPredicted RBP0□□□□□ -2.41
RDS3YPR094W ZRG17P53735 605 aa0□□□□□ -2.41
RDS3YPR094W YNR048WP53740 393 aa0□□□□□ -2.41
RDS3YPR094W FRE4P53746 719 aa0□□□□□ -2.41
RDS3YPR094W IPI3P53877 555 aa0□□□□□ -2.41
RDS3YPR094W RHO5P53879 331 aaKnown RBP0□□□□□ -2.41
RDS3YPR094W RGM1Q00453 211 aa0□□□□□ -2.41
RDS3YPR094W RPL21AQ02753 160 aaKnown RBP0□□□□□ -2.41
RDS3YPR094W FAR10Q06001 478 aa0□□□□□ -2.41
RDS3YPR094W RPL21BQ12672 160 aaKnown RBP0□□□□□ -2.41
RDS3YPR094W RTP1Q12751 981 aa0□□□□□ -2.41
RDS3YPR094W TOP1P04786 769 aa-0.01□□□□□ -2.41
RDS3YPR094W SNF1P06782 633 aaKnown RBP-0.01□□□□□ -2.41
RDS3YPR094W PHO81P17442 1178 aa-0.01□□□□□ -2.41
RDS3YPR094W SNF6P18888 332 aa-0.01□□□□□ -2.41
RDS3YPR094W ZRC1P20107 442 aa-0.01□□□□□ -2.41
RDS3YPR094W RPB5P20434 215 aa-0.01□□□□□ -2.41
RDS3YPR094W MSM1P22438 575 aa-0.01□□□□□ -2.41
RDS3YPR094W RAD57P25301 460 aa-0.01□□□□□ -2.41
RDS3YPR094W PAP1P29468 568 aaKnown RBP-0.01□□□□□ -2.41
RDS3YPR094W SKN1P33336 771 aa-0.01□□□□□ -2.41
RDS3YPR094W ANR2P36090 516 aaPredicted RBP-0.01□□□□□ -2.41
RDS3YPR094W MSR1P38714 643 aa-0.01□□□□□ -2.41
RDS3YPR094W SBE22P38814 852 aa-0.01□□□□□ -2.41
RDS3YPR094W PFS1P38872 237 aa-0.01□□□□□ -2.41
RDS3YPR094W PTI1P39927 425 aaPredicted RBP-0.01□□□□□ -2.41
RDS3YPR094W BAT2P47176 376 aaKnown RBP-0.01□□□□□ -2.41
RDS3YPR094W AZR1P50080 613 aa-0.01□□□□□ -2.41
RDS3YPR094W KTR5P53966 522 aaPredicted RBP-0.01□□□□□ -2.41
RDS3YPR094W BUD22Q04347 519 aaKnown RBP-0.01□□□□□ -2.41
RDS3YPR094W SOV1Q04748 898 aa-0.01□□□□□ -2.41
RDS3YPR094W VPS38Q05919 439 aa-0.01□□□□□ -2.41
RDS3YPR094W FMP40Q08968 688 aaPredicted RBP-0.01□□□□□ -2.41
RDS3YPR094W SPE4Q12455 300 aa-0.01□□□□□ -2.41
RDS3YPR094W BRR1Q99177 341 aaPredicted RBP-0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms