RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YDL176WQ12027 708 aa4.81□□□□□ -1.64
SSO1YPL232W MLH3Q12083 715 aa4.81□□□□□ -1.64
SSO1YPL232W RUP1Q12242 671 aa4.81□□□□□ -1.64
SSO1YPL232W YPR064WQ12492 139 aa4.81□□□□□ -1.64
SSO1YPL232W YSF3P0C074 85 aaPredicted RBP4.8□□□□□ -1.64
SSO1YPL232W APN1P22936 367 aa4.8□□□□□ -1.64
SSO1YPL232W TRX3P25372 127 aa4.8□□□□□ -1.64
SSO1YPL232W ATS1P31386 333 aa4.8□□□□□ -1.64
SSO1YPL232W HES1P35843 434 aa4.8□□□□□ -1.64
SSO1YPL232W TUL1P36096 758 aa4.8□□□□□ -1.64
SSO1YPL232W IFA38P38286 347 aa4.8□□□□□ -1.64
SSO1YPL232W GRE3P38715 327 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
SSO1YPL232W SEC28P40509 296 aaKnown RBP4.8□□□□□ -1.64
SSO1YPL232W PRM10P42946 383 aa4.8□□□□□ -1.64
SSO1YPL232W SAE2P46946 345 aa4.8□□□□□ -1.64
SSO1YPL232W RPE1P46969 238 aa4.8□□□□□ -1.64
SSO1YPL232W YJR141WP47172 347 aaPredicted RBP4.8□□□□□ -1.64
SSO1YPL232W RPA14P50106 137 aa4.8□□□□□ -1.64
SSO1YPL232W SDT1P53078 280 aa4.8□□□□□ -1.64
SSO1YPL232W TAF12Q03761 539 aa4.8□□□□□ -1.64
SSO1YPL232W PDR8Q06149 701 aa4.8□□□□□ -1.64
SSO1YPL232W HXK2P04807 486 aaKnown RBP4.79□□□□□ -1.64
SSO1YPL232W GCR1P07261 785 aa4.79□□□□□ -1.64
SSO1YPL232W ARD1P07347 238 aaPredicted RBP4.79□□□□□ -1.64
SSO1YPL232W GPA2P10823 449 aa4.79□□□□□ -1.64
SSO1YPL232W STE12P13574 688 aa4.79□□□□□ -1.64
SSO1YPL232W DAP2P18962 818 aa4.79□□□□□ -1.64
SSO1YPL232W AAD3P25612 363 aa4.79□□□□□ -1.64
SSO1YPL232W PTC6P25646 442 aa4.79□□□□□ -1.64
SSO1YPL232W RIM1P32445 135 aaKnown RBP4.79□□□□□ -1.64
SSO1YPL232W NUP120P35729 1037 aa4.79□□□□□ -1.64
SSO1YPL232W CBP4P37267 147 aa4.79□□□□□ -1.64
SSO1YPL232W BNA4P38169 460 aa4.79□□□□□ -1.64
SSO1YPL232W YGP1P38616 354 aaKnown RBP4.79□□□□□ -1.64
SSO1YPL232W MNN5P46982 586 aa4.79□□□□□ -1.64
SSO1YPL232W MON1P53129 644 aa4.79□□□□□ -1.64
SSO1YPL232W HST2P53686 357 aa4.79□□□□□ -1.64
SSO1YPL232W REC102Q02721 264 aa4.79□□□□□ -1.64
SSO1YPL232W NHP10Q03435 203 aa4.79□□□□□ -1.64
SSO1YPL232W CRR1Q05790 422 aa4.79□□□□□ -1.64
SSO1YPL232W FAR10Q06001 478 aa4.79□□□□□ -1.64
SSO1YPL232W RUD3Q12234 484 aaKnown RBP4.79□□□□□ -1.64
SSO1YPL232W PRP46Q12417 451 aaPredicted RBP4.79□□□□□ -1.64
SSO1YPL232W ZRT2Q12436 422 aa4.79□□□□□ -1.64
SSO1YPL232W Q0297Q9ZZV8 51 aa4.79□□□□□ -1.64
SSO1YPL232W URA2P07259 2214 aaKnown RBP4.78□□□□□ -1.64
SSO1YPL232W TY2A-LR1P0C2J4 438 aa4.78□□□□□ -1.64
SSO1YPL232W YFR010W-AP0C5N0 62 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-FP0CX61 438 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-GR2P0CX62 438 aa4.78□□□□□ -1.64
SSO1YPL232W RPB4P20433 221 aaPredicted RBP4.78□□□□□ -1.64
SSO1YPL232W SEC14P24280 304 aaKnown RBP4.78□□□□□ -1.64
SSO1YPL232W TY2A-CP25383 438 aa4.78□□□□□ -1.64
SSO1YPL232W EMP70P32802 667 aa4.78□□□□□ -1.64
SSO1YPL232W CBF5P33322 483 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SSO1YPL232W SNU114P36048 1008 aaKnown RBP4.78□□□□□ -1.64
SSO1YPL232W TDP1P38319 544 aa4.78□□□□□ -1.64
SSO1YPL232W YMR262WP38430 313 aa4.78□□□□□ -1.64
SSO1YPL232W RIX1P38883 763 aaPredicted RBP4.78□□□□□ -1.64
SSO1YPL232W SEC9P40357 651 aa4.78□□□□□ -1.64
SSO1YPL232W YIL169CP40442 995 aa4.78□□□□□ -1.64
SSO1YPL232W YGR079WP53249 370 aa4.78□□□□□ -1.64
SSO1YPL232W RPL22BP56628 122 aaKnown RBP4.78□□□□□ -1.64
SSO1YPL232W CTR9P89105 1077 aa4.78□□□□□ -1.64
SSO1YPL232W PFA5Q03289 374 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-DR2Q03483 438 aa4.78□□□□□ -1.64
SSO1YPL232W RQC1Q05468 723 aaKnown RBP4.78□□□□□ -1.64
SSO1YPL232W ECI1Q05871 280 aa4.78□□□□□ -1.64
SSO1YPL232W YEH1Q07804 573 aa4.78□□□□□ -1.64
SSO1YPL232W ESA1Q08649 445 aa4.78□□□□□ -1.64
SSO1YPL232W ACM1Q08981 209 aa4.78□□□□□ -1.64
SSO1YPL232W YDL211CQ12121 372 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-BQ12260 438 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-OR2Q12293 438 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-DR1Q12392 438 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-OR1Q12439 438 aa4.78□□□□□ -1.64
SSO1YPL232W TY2A-DR3Q99303 438 aa4.78□□□□□ -1.64
SSO1YPL232W Q0144Q9ZZW2 109 aa4.78□□□□□ -1.64
SSO1YPL232W CDC36P06100 191 aaPredicted RBP4.77□□□□□ -1.65
SSO1YPL232W SRV2P17555 526 aaKnown RBP4.77□□□□□ -1.65
SSO1YPL232W RPI1P23250 407 aaKnown RBP4.77□□□□□ -1.65
SSO1YPL232W FUN30P31380 1131 aa4.77□□□□□ -1.65
SSO1YPL232W PTR2P32901 601 aa4.77□□□□□ -1.65
SSO1YPL232W DOA1P36037 715 aa4.77□□□□□ -1.65
SSO1YPL232W HOS4P40480 1083 aa4.77□□□□□ -1.65
SSO1YPL232W YIL067CP40514 678 aa4.77□□□□□ -1.65
SSO1YPL232W CIN1P40987 1014 aa4.77□□□□□ -1.65
SSO1YPL232W NMD5P46970 1048 aa4.77□□□□□ -1.65
SSO1YPL232W ALB1P47019 175 aaPredicted RBP4.77□□□□□ -1.65
SSO1YPL232W MAL12P53341 584 aa4.77□□□□□ -1.65
SSO1YPL232W SLT2Q00772 484 aa4.77□□□□□ -1.65
SSO1YPL232W UTP6Q02354 440 aaKnown RBP4.77□□□□□ -1.65
SSO1YPL232W PLM2Q04383 521 aa4.77□□□□□ -1.65
SSO1YPL232W ADE13Q05911 482 aaKnown RBP4.77□□□□□ -1.65
SSO1YPL232W YLR346CQ06139 101 aa4.77□□□□□ -1.65
SSO1YPL232W YPR097WQ06839 1073 aa4.77□□□□□ -1.65
SSO1YPL232W MDY2Q12285 212 aa4.77□□□□□ -1.65
SSO1YPL232W YMR030W-AQ3E760 96 aa4.77□□□□□ -1.65
SSO1YPL232W MDM12Q92328 271 aa4.77□□□□□ -1.65
SSO1YPL232W MTR10Q99189 972 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms