RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A PRS1P32895 427 aaKnown RBP2.58□□□□□ -2
YOR343W-AYOR343W-A NIP100P33420 868 aa2.58□□□□□ -2
YOR343W-AYOR343W-A PMT1P33775 817 aa2.58□□□□□ -2
YOR343W-AYOR343W-A PIM1P36775 1133 aa2.58□□□□□ -2
YOR343W-AYOR343W-A VID24P38263 362 aa2.58□□□□□ -2
YOR343W-AYOR343W-A SLX1P38324 304 aa2.58□□□□□ -2
YOR343W-AYOR343W-A CCT2P39076 527 aaKnown RBP2.58□□□□□ -2
YOR343W-AYOR343W-A LAM5P43560 674 aa2.58□□□□□ -2
YOR343W-AYOR343W-A HRI1Q05905 244 aaKnown RBP2.58□□□□□ -2
YOR343W-AYOR343W-A MUM3Q08750 479 aa2.58□□□□□ -2
YOR343W-AYOR343W-A SPS4P09937 338 aa2.57□□□□□ -2
YOR343W-AYOR343W-A NAT1P12945 854 aaKnown RBP2.57□□□□□ -2
YOR343W-AYOR343W-A DAL2P25335 343 aa2.57□□□□□ -2
YOR343W-AYOR343W-A RVS161P25343 265 aaKnown RBP2.57□□□□□ -2
YOR343W-AYOR343W-A ECM25P32525 599 aa2.57□□□□□ -2
YOR343W-AYOR343W-A RIB5P38145 238 aa2.57□□□□□ -2
YOR343W-AYOR343W-A RMD9P53140 646 aaKnown RBP2.57□□□□□ -2
YOR343W-AYOR343W-A DSL1P53847 754 aa2.57□□□□□ -2
YOR343W-AYOR343W-A JJJ1P53863 590 aa2.57□□□□□ -2
YOR343W-AYOR343W-A HER2Q03557 464 aa2.57□□□□□ -2
YOR343W-AYOR343W-A TRP1P00912 224 aa2.56□□□□□ -2
YOR343W-AYOR343W-A APE2P32454 952 aaKnown RBP2.56□□□□□ -2
YOR343W-AYOR343W-A MSG5P38590 489 aa2.56□□□□□ -2
YOR343W-AYOR343W-A PAN6P40459 309 aa2.56□□□□□ -2
YOR343W-AYOR343W-A VTC2P43585 828 aa2.56□□□□□ -2
YOR343W-AYOR343W-A YDR387CQ04162 555 aa2.56□□□□□ -2
YOR343W-AYOR343W-A RQC1Q05468 723 aaKnown RBP2.56□□□□□ -2
YOR343W-AYOR343W-A YDL121CQ07541 149 aa2.56□□□□□ -2
YOR343W-AYOR343W-A RIM20Q12033 661 aa2.56□□□□□ -2
YOR343W-AYOR343W-A YPR022CQ12139 1133 aa2.56□□□□□ -2
YOR343W-AYOR343W-A PKH2Q12236 1081 aaKnown RBP2.56□□□□□ -2
YOR343W-AYOR343W-A RPI1P23250 407 aaKnown RBP2.55□□□□□ -2
YOR343W-AYOR343W-A PRP21P32524 280 aaPredicted RBP2.55□□□□□ -2
YOR343W-AYOR343W-A YBR137WP38276 179 aa2.55□□□□□ -2
YOR343W-AYOR343W-A HXT11P54862 567 aa2.55□□□□□ -2
YOR343W-AYOR343W-A PPM1Q04081 328 aa2.55□□□□□ -2
YOR343W-AYOR343W-A HSP31Q04432 237 aa2.55□□□□□ -2
YOR343W-AYOR343W-A TIM18Q08749 192 aa2.55□□□□□ -2
YOR343W-AYOR343W-A MED1Q12321 566 aa2.55□□□□□ -2
YOR343W-AYOR343W-A RRI2Q12348 645 aa2.55□□□□□ -2
YOR343W-AYOR343W-A HIS4P00815 799 aaKnown RBP2.54□□□□□ -2
YOR343W-AYOR343W-A PPH22P23595 377 aa2.54□□□□□ -2
YOR343W-AYOR343W-A ITR1P30605 584 aa2.54□□□□□ -2
YOR343W-AYOR343W-A ECM27P47144 725 aa2.54□□□□□ -2
YOR343W-AYOR343W-A SHY1P53266 389 aa2.54□□□□□ -2
YOR343W-AYOR343W-A SYF1Q04048 859 aaPredicted RBP2.54□□□□□ -2
YOR343W-AYOR343W-A FDH1Q08911 376 aa2.54□□□□□ -2
YOR343W-AYOR343W-A YDL012CQ12489 107 aa2.54□□□□□ -2
YOR343W-AYOR343W-A GPH1P06738 902 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A RPS8AP0CX39 200 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A RPS8BP0CX40 200 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A RPL3P14126 387 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A LSB5P25369 354 aa2.53□□□□□ -2
YOR343W-AYOR343W-A HXT3P32466 567 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A YHR054CP38780 354 aa2.53□□□□□ -2
YOR343W-AYOR343W-A UTP9P38882 575 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A ARF3P40994 183 aaRIP-Chip data2.53□□□□□ -2not detected
YOR343W-AYOR343W-A YNR048WP53740 393 aa2.53□□□□□ -2
YOR343W-AYOR343W-A FRE4P53746 719 aa2.53□□□□□ -2
YOR343W-AYOR343W-A APJ1P53940 528 aa2.53□□□□□ -2
YOR343W-AYOR343W-A YMR181CQ03231 154 aa2.53□□□□□ -2
YOR343W-AYOR343W-A GIR2Q03768 265 aaPredicted RBP2.53□□□□□ -2
YOR343W-AYOR343W-A TSA2Q04120 196 aa2.53□□□□□ -2
YOR343W-AYOR343W-A SGT1Q08446 395 aa2.53□□□□□ -2
YOR343W-AYOR343W-A SNX3Q08826 162 aaKnown RBP2.53□□□□□ -2
YOR343W-AYOR343W-A GRX6Q12438 231 aa2.53□□□□□ -2
YOR343W-AYOR343W-A RIP1P08067 215 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A MRP7P12687 371 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A SLY1P22213 666 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A KKQ8P36004 724 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A SMF1P38925 575 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A YIF1P53845 314 aaKnown RBP2.52□□□□□ -2.01
YOR343W-AYOR343W-A YMR027WQ04371 470 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A WTM1Q12363 437 aaKnown RBP2.52□□□□□ -2.01
YOR343W-AYOR343W-A CCH1P50077 2039 aa2.52□□□□□ -2.01
YOR343W-AYOR343W-A TEF1P02994 458 aaKnown RBP2.51□□□□□ -2.01
YOR343W-AYOR343W-A ARG4P04076 463 aaPredicted RBP2.51□□□□□ -2.01
YOR343W-AYOR343W-A NFT1P0CE68 1218 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A SEC63P14906 663 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A MNS1P32906 549 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A VHC1P38329 1120 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A OTU2P38747 307 aaKnown RBP2.51□□□□□ -2.01
YOR343W-AYOR343W-A SAS2P40963 338 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A IRC6P43615 237 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A MTM1P53320 366 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A CWC25P53854 179 aaKnown RBP2.51□□□□□ -2.01
YOR343W-AYOR343W-A PEX25Q02969 394 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A RSN1Q03516 953 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A SIL1Q08199 421 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A RTP1Q12751 981 aa2.51□□□□□ -2.01
YOR343W-AYOR343W-A TOP1P04786 769 aa2.5□□□□□ -2.01
YOR343W-AYOR343W-A MET17P06106 444 aa2.5□□□□□ -2.01
YOR343W-AYOR343W-A CYC3P06182 269 aa2.5□□□□□ -2.01
YOR343W-AYOR343W-A ROX1P25042 368 aa2.5□□□□□ -2.01
YOR343W-AYOR343W-A POP5P28005 173 aa2.5□□□□□ -2.01
YOR343W-AYOR343W-A MUD1P32605 298 aaKnown RBP2.5□□□□□ -2.01
YOR343W-AYOR343W-A LYS1P38998 373 aaRIP-Chip data2.5□□□□□ -2.01not detected
YOR343W-AYOR343W-A MNP1P53163 194 aaPredicted RBP2.5□□□□□ -2.01
YOR343W-AYOR343W-A RPA49Q01080 415 aaPredicted RBP2.5□□□□□ -2.01
YOR343W-AYOR343W-A ILV5P06168 395 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms