RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W CLB3P24870 427 aa3.73□□□□□ -1.81
USA1YML029W RAD51P25454 400 aa3.73□□□□□ -1.81
USA1YML029W SDH3P33421 198 aa3.73□□□□□ -1.81
USA1YML029W YBR184WP38299 523 aa3.73□□□□□ -1.81
USA1YML029W SDT1P53078 280 aa3.73□□□□□ -1.81
USA1YML029W YPL071CQ02864 156 aa3.73□□□□□ -1.81
USA1YML029W RSM10Q03201 203 aa3.73□□□□□ -1.81
USA1YML029W ROY1Q04847 553 aa3.73□□□□□ -1.81
USA1YML029W SNX3Q08826 162 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W PFA4Q12006 378 aa3.73□□□□□ -1.81
USA1YML029W MHT1Q12525 324 aa3.73□□□□□ -1.81
USA1YML029W SRN2Q99176 213 aa3.73□□□□□ -1.81
USA1YML029W RPS4AP0CX35 261 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W RPS4BP0CX36 261 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W SKN1P33336 771 aa3.73□□□□□ -1.81
USA1YML029W YBL029WP38201 376 aa3.73□□□□□ -1.81
USA1YML029W INM1P38710 295 aa3.73□□□□□ -1.81
USA1YML029W TRM5P38793 499 aa3.73□□□□□ -1.81
USA1YML029W PRP39P39682 629 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W APQ12P40532 138 aa3.73□□□□□ -1.81
USA1YML029W AIM22P47051 409 aa3.73□□□□□ -1.81
USA1YML029W ASK10P48361 1146 aa3.73□□□□□ -1.81
USA1YML029W YPT32P51996 222 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W COG2P53271 262 aa3.73□□□□□ -1.81
USA1YML029W ESF2P53743 316 aaKnown RBP3.73□□□□□ -1.81
USA1YML029W YNL140CP53910 189 aa3.73□□□□□ -1.81
USA1YML029W BSC2Q05611 235 aa3.73□□□□□ -1.81
USA1YML029W YOR114WQ12219 294 aa3.73□□□□□ -1.81
USA1YML029W YPR011CQ12251 326 aa3.73□□□□□ -1.81
USA1YML029W TMA17Q12513 150 aa3.73□□□□□ -1.81
USA1YML029W SEC39Q12745 709 aa3.73□□□□□ -1.81
USA1YML029W RPS17AP02407 136 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W TOP3P13099 656 aa3.72□□□□□ -1.81
USA1YML029W RPS17BP14127 136 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W RNQ1P25367 405 aa3.72□□□□□ -1.81
USA1YML029W BUD14P27637 709 aa3.72□□□□□ -1.81
USA1YML029W FUN30P31380 1131 aa3.72□□□□□ -1.81
USA1YML029W PET127P32606 800 aa3.72□□□□□ -1.81
USA1YML029W SPO23P33757 523 aa3.72□□□□□ -1.81
USA1YML029W FMP46P36141 133 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W RRN10P38204 145 aa3.72□□□□□ -1.81
USA1YML029W ARB1P40024 610 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W CAB2P40506 365 aa3.72□□□□□ -1.81
USA1YML029W YIL067CP40514 678 aa3.72□□□□□ -1.81
USA1YML029W YIL001WP40560 513 aa3.72□□□□□ -1.81
USA1YML029W SEC27P41811 889 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W MRPS18P42847 217 aa3.72□□□□□ -1.81
USA1YML029W NAM8Q00539 523 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W EFR3Q03653 782 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W COS7Q07788 383 aa3.72□□□□□ -1.81
USA1YML029W REX3Q12090 404 aa3.72□□□□□ -1.81
USA1YML029W RGT2Q12300 763 aa3.72□□□□□ -1.81
USA1YML029W PNO1Q99216 274 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W HRP1Q99383 534 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W ATP6P00854 259 aa3.72□□□□□ -1.81
USA1YML029W RPL1AP0CX43 217 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W RPL1BP0CX44 217 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W CWP1P28319 239 aa3.72□□□□□ -1.81
USA1YML029W AAR2P32357 355 aaPredicted RBP3.72□□□□□ -1.81
USA1YML029W CDC5P32562 705 aa3.72□□□□□ -1.81
USA1YML029W STE14P32584 239 aa3.72□□□□□ -1.81
USA1YML029W CEM1P39525 442 aa3.72□□□□□ -1.81
USA1YML029W IES5P40060 125 aa3.72□□□□□ -1.81
USA1YML029W ALG5P40350 334 aa3.72□□□□□ -1.81
USA1YML029W SEC26P41810 973 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W ALR2P43553 858 aa3.72□□□□□ -1.81
USA1YML029W YGL176CP46945 554 aa3.72□□□□□ -1.81
USA1YML029W CIS3P47001 227 aa3.72□□□□□ -1.81
USA1YML029W HXT16P47185 567 aa3.72□□□□□ -1.81
USA1YML029W MAL11P53048 616 aa3.72□□□□□ -1.81
USA1YML029W ARC35P53731 342 aaKnown RBP3.72□□□□□ -1.81
USA1YML029W HXT15P54854 567 aa3.72□□□□□ -1.81
USA1YML029W AAT1Q01802 451 aa3.72□□□□□ -1.81
USA1YML029W ECM9Q02202 377 aa3.72□□□□□ -1.81
USA1YML029W YDR476CQ03362 224 aa3.72□□□□□ -1.81
USA1YML029W ACL4Q03771 387 aa3.72□□□□□ -1.81
USA1YML029W BSC6Q08280 497 aa3.72□□□□□ -1.81
USA1YML029W SGT1Q08446 395 aa3.72□□□□□ -1.81
USA1YML029W HUA2Q12134 243 aa3.72□□□□□ -1.81
USA1YML029W NKP1Q12493 238 aa3.72□□□□□ -1.81
USA1YML029W GCD2P12754 651 aaPredicted RBP3.71□□□□□ -1.82
USA1YML029W RED1P14291 827 aa3.71□□□□□ -1.82
USA1YML029W PDC5P16467 563 aaKnown RBP3.71□□□□□ -1.82
USA1YML029W SGV1P23293 657 aaKnown RBP3.71□□□□□ -1.82
USA1YML029W RVS161P25343 265 aaKnown RBP3.71□□□□□ -1.82
USA1YML029W VMA3P25515 160 aa3.71□□□□□ -1.82
USA1YML029W YJU2P28320 278 aaPredicted RBP3.71□□□□□ -1.82
USA1YML029W ZIP1P31111 875 aa3.71□□□□□ -1.82
USA1YML029W SFA1P32771 386 aa3.71□□□□□ -1.82
USA1YML029W LYS1P38998 373 aaRIP-Chip data3.71□□□□□ -1.82 RIP-Chip
USA1YML029W IMA5P40884 581 aa3.71□□□□□ -1.82
USA1YML029W GAB1P41733 394 aa3.71□□□□□ -1.82
USA1YML029W GNP1P48813 663 aa3.71□□□□□ -1.82
USA1YML029W GPG1P53130 126 aa3.71□□□□□ -1.82
USA1YML029W CTK1Q03957 528 aaKnown RBP3.71□□□□□ -1.82
USA1YML029W YPQ2Q06328 317 aa3.71□□□□□ -1.82
USA1YML029W BCP1Q06338 283 aa3.71□□□□□ -1.82
USA1YML029W VPS74Q06385 345 aa3.71□□□□□ -1.82
USA1YML029W YPL245WQ12179 454 aaKnown RBP3.71□□□□□ -1.82
USA1YML029W PHO81P17442 1178 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms