RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C SSY1Q03770 852 aa11.91□□□□□ -0.5
BDF1YLR399C AAD4Q07747 329 aa11.91□□□□□ -0.5
BDF1YLR399C NUS1Q12063 375 aa11.91□□□□□ -0.5
BDF1YLR399C SNF8Q12483 233 aa11.91□□□□□ -0.5
BDF1YLR399C DST1P07273 309 aa11.91□□□□□ -0.5
BDF1YLR399C TAH1P25638 111 aaPredicted RBP11.91□□□□□ -0.5
BDF1YLR399C SPO73P40031 143 aa11.91□□□□□ -0.5
BDF1YLR399C MPM1P40364 252 aa11.91□□□□□ -0.5
BDF1YLR399C LSM1P47017 172 aaKnown RBP11.91□□□□□ -0.5
BDF1YLR399C YJL049WP47048 450 aa11.91□□□□□ -0.5
BDF1YLR399C MCA1Q08601 432 aa11.91□□□□□ -0.5
BDF1YLR399C YDL199CQ12407 687 aa11.91□□□□□ -0.5
BDF1YLR399C HXK2P04807 486 aaKnown RBP11.9□□□□□ -0.5
BDF1YLR399C TRM1P15565 570 aaKnown RBP11.9□□□□□ -0.5
BDF1YLR399C YER184CP39961 794 aa11.9□□□□□ -0.5
BDF1YLR399C AYR1P40471 297 aa11.9□□□□□ -0.5
BDF1YLR399C CAK1P43568 368 aaPredicted RBP11.9□□□□□ -0.5
BDF1YLR399C RET2P43621 546 aa11.9□□□□□ -0.5
BDF1YLR399C ROK1P45818 564 aaPredicted RBP11.9□□□□□ -0.5
BDF1YLR399C YJL007CP47080 104 aa11.9□□□□□ -0.5
BDF1YLR399C NAS6P50086 228 aa11.9□□□□□ -0.5
BDF1YLR399C CAF120P53836 1060 aa11.9□□□□□ -0.5
BDF1YLR399C YDR124WQ04608 324 aa11.9□□□□□ -0.5
BDF1YLR399C YLR224WQ05947 369 aa11.9□□□□□ -0.5
BDF1YLR399C OPT2Q06593 877 aa11.9□□□□□ -0.5
BDF1YLR399C RMD5Q12508 421 aa11.9□□□□□ -0.5
BDF1YLR399C MDH1P17505 334 aaKnown RBP RIP-Chip data11.9□□□□□ -0.51not detected
BDF1YLR399C YCR099CP25657 155 aa11.9□□□□□ -0.51
BDF1YLR399C GDI1P39958 451 aaKnown RBP11.9□□□□□ -0.51
BDF1YLR399C CAF16P43569 289 aa11.9□□□□□ -0.51
BDF1YLR399C TIM54P47045 478 aa11.9□□□□□ -0.51
BDF1YLR399C UBC12P52491 188 aa11.9□□□□□ -0.51
BDF1YLR399C MKC7P53379 596 aa11.9□□□□□ -0.51
BDF1YLR399C CRF1Q04930 467 aa11.9□□□□□ -0.51
BDF1YLR399C YMR034CQ05131 434 aaPredicted RBP11.9□□□□□ -0.51
BDF1YLR399C UPC2Q12151 913 aa11.9□□□□□ -0.51
BDF1YLR399C ERP3Q12403 225 aa11.9□□□□□ -0.51
BDF1YLR399C YBR085C-AO43137 85 aa11.89□□□□□ -0.51
BDF1YLR399C SAM35P14693 329 aa11.89□□□□□ -0.51
BDF1YLR399C GUT2P32191 649 aa11.89□□□□□ -0.51
BDF1YLR399C BIO2P32451 375 aa11.89□□□□□ -0.51
BDF1YLR399C SCD5P34758 872 aa11.89□□□□□ -0.51
BDF1YLR399C DHR2P36009 735 aaPredicted RBP11.89□□□□□ -0.51
BDF1YLR399C YHR054CP38780 354 aa11.89□□□□□ -0.51
BDF1YLR399C RSC30P38781 883 aa11.89□□□□□ -0.51
BDF1YLR399C AAD14P42884 376 aa11.89□□□□□ -0.51
BDF1YLR399C MPC1P53157 130 aaKnown RBP11.89□□□□□ -0.51
BDF1YLR399C LSM7P53905 115 aaKnown RBP11.89□□□□□ -0.51
BDF1YLR399C MRPS16Q02608 121 aa11.89□□□□□ -0.51
BDF1YLR399C YLL007CQ07799 665 aa11.89□□□□□ -0.51
BDF1YLR399C YDR461C-AQ2V2P7 80 aa11.89□□□□□ -0.51
BDF1YLR399C AMD1P15274 810 aaKnown RBP11.88□□□□□ -0.51
BDF1YLR399C IDP1P21954 428 aaKnown RBP11.88□□□□□ -0.51
BDF1YLR399C PKC1P24583 1151 aa11.88□□□□□ -0.51
BDF1YLR399C BAP2P38084 609 aa11.88□□□□□ -0.51
BDF1YLR399C GTT3P39996 337 aa11.88□□□□□ -0.51
BDF1YLR399C FMP52P40008 231 aa11.88□□□□□ -0.51
BDF1YLR399C RPS7BP48164 190 aaKnown RBP11.88□□□□□ -0.51
BDF1YLR399C COS1P53822 381 aa11.88□□□□□ -0.51
BDF1YLR399C AIM36Q03798 255 aa11.88□□□□□ -0.51
BDF1YLR399C RNH1Q04740 348 aa11.88□□□□□ -0.51
BDF1YLR399C SWC7Q06707 132 aa11.88□□□□□ -0.51
BDF1YLR399C YOL107WQ12239 342 aa11.88□□□□□ -0.51
BDF1YLR399C LCB4Q12246 624 aa11.88□□□□□ -0.51
BDF1YLR399C PUP1P25043 261 aa11.88□□□□□ -0.51
BDF1YLR399C EFM1P38732 585 aa11.88□□□□□ -0.51
BDF1YLR399C PRM9P39551 298 aa11.88□□□□□ -0.51
BDF1YLR399C QDR1P40475 563 aa11.88□□□□□ -0.51
BDF1YLR399C GAB1P41733 394 aa11.88□□□□□ -0.51
BDF1YLR399C SIZ1Q04195 904 aa11.88□□□□□ -0.51
BDF1YLR399C YLR283WQ05867 314 aa11.88□□□□□ -0.51
BDF1YLR399C RPL3P14126 387 aaKnown RBP11.87□□□□□ -0.51
BDF1YLR399C SNC1P31109 117 aa11.87□□□□□ -0.51
BDF1YLR399C OSH7P38755 437 aa11.87□□□□□ -0.51
BDF1YLR399C RMD8P43620 662 aa11.87□□□□□ -0.51
BDF1YLR399C SLI1P53304 468 aa11.87□□□□□ -0.51
BDF1YLR399C MET14Q02196 202 aa11.87□□□□□ -0.51
BDF1YLR399C ARV1Q06541 321 aa11.87□□□□□ -0.51
BDF1YLR399C RCL1Q08096 367 aaPredicted RBP11.87□□□□□ -0.51
BDF1YLR399C CYC1P00044 109 aaPredicted RBP11.87□□□□□ -0.51
BDF1YLR399C RPL17AP05740 184 aaKnown RBP11.87□□□□□ -0.51
BDF1YLR399C HCM1P25364 564 aa11.87□□□□□ -0.51
BDF1YLR399C MSN2P33748 704 aa11.87□□□□□ -0.51
BDF1YLR399C SSO2P39926 295 aa11.87□□□□□ -0.51
BDF1YLR399C ISC1P40015 477 aaKnown RBP11.87□□□□□ -0.51
BDF1YLR399C PRE6P40303 254 aaKnown RBP11.87□□□□□ -0.51
BDF1YLR399C NIT1P40447 199 aa11.87□□□□□ -0.51
BDF1YLR399C OPT1P40897 799 aa11.87□□□□□ -0.51
BDF1YLR399C MEP2P41948 499 aa11.87□□□□□ -0.51
BDF1YLR399C JHD2P47156 728 aaPredicted RBP11.87□□□□□ -0.51
BDF1YLR399C SCY1P53009 804 aa11.87□□□□□ -0.51
BDF1YLR399C CGR1P53188 120 aa11.87□□□□□ -0.51
BDF1YLR399C TRM44Q02648 567 aaKnown RBP11.87□□□□□ -0.51
BDF1YLR399C PET117Q02771 107 aa11.87□□□□□ -0.51
BDF1YLR399C TRM82Q03774 444 aa11.87□□□□□ -0.51
BDF1YLR399C YOL131WQ08270 108 aa11.87□□□□□ -0.51
BDF1YLR399C SIA1Q12212 622 aa11.87□□□□□ -0.51
BDF1YLR399C RTN2Q12443 393 aa11.87□□□□□ -0.51
BDF1YLR399C YOR131CQ12486 218 aa11.87□□□□□ -0.51
BDF1YLR399C OCA4P25366 362 aa11.86□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 83.3 ms