RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W TMS1Q12116 473 aa3.04□□□□□ -1.92
CAP1YKL007W RAD61Q99359 647 aa3.04□□□□□ -1.92
CAP1YKL007W CKA1P15790 372 aa3.03□□□□□ -1.92
CAP1YKL007W TIP1P27654 210 aaPredicted RBP3.03□□□□□ -1.92
CAP1YKL007W PRP21P32524 280 aaPredicted RBP3.03□□□□□ -1.92
CAP1YKL007W ECM25P32525 599 aa3.03□□□□□ -1.92
CAP1YKL007W NIP100P33420 868 aa3.03□□□□□ -1.92
CAP1YKL007W RRT2P38332 387 aa3.03□□□□□ -1.92
CAP1YKL007W SMF1P38925 575 aa3.03□□□□□ -1.92
CAP1YKL007W OST1P41543 476 aaKnown RBP3.03□□□□□ -1.92
CAP1YKL007W YMR181CQ03231 154 aa3.03□□□□□ -1.92
CAP1YKL007W YDR387CQ04162 555 aa3.03□□□□□ -1.92
CAP1YKL007W TSR2Q06672 205 aaKnown RBP3.03□□□□□ -1.92
CAP1YKL007W GRX6Q12438 231 aa3.03□□□□□ -1.92
CAP1YKL007W RRD2Q12461 358 aa3.03□□□□□ -1.92
CAP1YKL007W ISY1P21374 235 aaPredicted RBP3.02□□□□□ -1.93
CAP1YKL007W APE2P32454 952 aaKnown RBP3.02□□□□□ -1.93
CAP1YKL007W VHC1P38329 1120 aa3.02□□□□□ -1.93
CAP1YKL007W CCT2P39076 527 aaKnown RBP3.02□□□□□ -1.93
CAP1YKL007W FAA2P39518 744 aa3.02□□□□□ -1.93
CAP1YKL007W PRM5P40476 318 aa3.02□□□□□ -1.93
CAP1YKL007W FMS1P50264 508 aa3.02□□□□□ -1.93
CAP1YKL007W MNP1P53163 194 aaPredicted RBP3.02□□□□□ -1.93
CAP1YKL007W SUB1P54000 292 aaKnown RBP3.02□□□□□ -1.93
CAP1YKL007W SGT1Q08446 395 aa3.02□□□□□ -1.93
CAP1YKL007W HSP42Q12329 375 aa3.02□□□□□ -1.93
CAP1YKL007W ARG4P04076 463 aaPredicted RBP3.01□□□□□ -1.93
CAP1YKL007W PET123P17558 318 aa3.01□□□□□ -1.93
CAP1YKL007W DAL2P25335 343 aa3.01□□□□□ -1.93
CAP1YKL007W HCS1P34243 683 aa3.01□□□□□ -1.93
CAP1YKL007W YHR054CP38780 354 aa3.01□□□□□ -1.93
CAP1YKL007W MTC6P38849 526 aa3.01□□□□□ -1.93
CAP1YKL007W ESL1P40456 1118 aa3.01□□□□□ -1.93
CAP1YKL007W VMA13P41807 478 aaKnown RBP3.01□□□□□ -1.93
CAP1YKL007W MRPL19P53875 158 aa3.01□□□□□ -1.93
CAP1YKL007W YMR027WQ04371 470 aa3.01□□□□□ -1.93
CAP1YKL007W HRI1Q05905 244 aaKnown RBP3.01□□□□□ -1.93
CAP1YKL007W HRT3Q12347 344 aa3.01□□□□□ -1.93
CAP1YKL007W RTP1Q12751 981 aa3.01□□□□□ -1.93
CAP1YKL007W YLR278CQ05854 1341 aa3□□□□□ -1.93
CAP1YKL007W MET17P06106 444 aa3□□□□□ -1.93
CAP1YKL007W RIP1P08067 215 aa3□□□□□ -1.93
CAP1YKL007W RPI1P23250 407 aaKnown RBP3□□□□□ -1.93
CAP1YKL007W ROX1P25042 368 aa3□□□□□ -1.93
CAP1YKL007W RVS161P25343 265 aaKnown RBP3□□□□□ -1.93
CAP1YKL007W PIM1P36775 1133 aa3□□□□□ -1.93
CAP1YKL007W NAB3P38996 802 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
CAP1YKL007W NCA3P46955 337 aa3□□□□□ -1.93
CAP1YKL007W YNR048WP53740 393 aa3□□□□□ -1.93
CAP1YKL007W YIF1P53845 314 aaKnown RBP3□□□□□ -1.93
CAP1YKL007W PEX25Q02969 394 aa3□□□□□ -1.93
CAP1YKL007W REX4Q08237 289 aa3□□□□□ -1.93
CAP1YKL007W BUD21Q08492 214 aaPredicted RBP3□□□□□ -1.93
CAP1YKL007W YPR022CQ12139 1133 aa3□□□□□ -1.93
CAP1YKL007W RPL3P14126 387 aaKnown RBP2.99□□□□□ -1.93
CAP1YKL007W PPH22P23595 377 aa2.99□□□□□ -1.93
CAP1YKL007W MNS1P32906 549 aa2.99□□□□□ -1.93
CAP1YKL007W LYS1P38998 373 aaRIP-Chip data2.99□□□□□ -1.93not detected
CAP1YKL007W DLD2P46681 530 aaKnown RBP2.99□□□□□ -1.93
CAP1YKL007W YJR011CP47086 261 aaPredicted RBP2.99□□□□□ -1.93
CAP1YKL007W PPM1Q04081 328 aa2.99□□□□□ -1.93
CAP1YKL007W MHR1Q06630 226 aa2.99□□□□□ -1.93
CAP1YKL007W MRPL35Q06678 367 aa2.99□□□□□ -1.93
CAP1YKL007W TMC1Q08422 150 aaPredicted RBP2.99□□□□□ -1.93
CAP1YKL007W TEF1P02994 458 aaKnown RBP2.98□□□□□ -1.93
CAP1YKL007W CLN3P13365 580 aa2.98□□□□□ -1.93
CAP1YKL007W CLB3P24870 427 aa2.98□□□□□ -1.93
CAP1YKL007W HXT1P32465 570 aa2.98□□□□□ -1.93
CAP1YKL007W HXT3P32466 567 aaKnown RBP2.98□□□□□ -1.93
CAP1YKL007W SPR1P32603 445 aa2.98□□□□□ -1.93
CAP1YKL007W ARA1P38115 344 aa2.98□□□□□ -1.93
CAP1YKL007W SWD3P38123 315 aa2.98□□□□□ -1.93
CAP1YKL007W DED81P38707 554 aaKnown RBP2.98□□□□□ -1.93
CAP1YKL007W PAN6P40459 309 aa2.98□□□□□ -1.93
CAP1YKL007W FRE4P53746 719 aa2.98□□□□□ -1.93
CAP1YKL007W CWC25P53854 179 aaKnown RBP2.98□□□□□ -1.93
CAP1YKL007W HXT11P54862 567 aa2.98□□□□□ -1.93
CAP1YKL007W SFI1Q12369 946 aa2.98□□□□□ -1.93
CAP1YKL007W ADH2P00331 348 aaKnown RBP2.97□□□□□ -1.93
CAP1YKL007W LSB5P25369 354 aa2.97□□□□□ -1.93
CAP1YKL007W CDC60P26637 1090 aaKnown RBP2.97□□□□□ -1.93
CAP1YKL007W KKQ8P36004 724 aa2.97□□□□□ -1.93
CAP1YKL007W NTC20P38302 140 aaPredicted RBP2.97□□□□□ -1.93
CAP1YKL007W NDE1P40215 560 aa2.97□□□□□ -1.93
CAP1YKL007W SAS2P40963 338 aa2.97□□□□□ -1.93
CAP1YKL007W SHY1P53266 389 aa2.97□□□□□ -1.93
CAP1YKL007W YLR152CP54072 576 aa2.97□□□□□ -1.93
CAP1YKL007W RSN1Q03516 953 aa2.97□□□□□ -1.93
CAP1YKL007W RRP45Q05636 305 aaKnown RBP2.97□□□□□ -1.93
CAP1YKL007W BSC6Q08280 497 aa2.97□□□□□ -1.93
CAP1YKL007W SNX3Q08826 162 aaKnown RBP2.97□□□□□ -1.93
CAP1YKL007W WTM1Q12363 437 aaKnown RBP2.97□□□□□ -1.93
CAP1YKL007W RTN2Q12443 393 aa2.97□□□□□ -1.93
CAP1YKL007W RED1P14291 827 aa2.96□□□□□ -1.94
CAP1YKL007W SLY1P22213 666 aa2.96□□□□□ -1.94
CAP1YKL007W SIN4P32259 974 aa2.96□□□□□ -1.94
CAP1YKL007W RPN12P32496 274 aa2.96□□□□□ -1.94
CAP1YKL007W MUD1P32605 298 aaKnown RBP2.96□□□□□ -1.94
CAP1YKL007W HMS2P47175 358 aa2.96□□□□□ -1.94
CAP1YKL007W SEC63P14906 663 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms