RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C APM4Q99186 491 aa3.44□□□□□ -1.86
SSM4YIL030C PDE2P06776 526 aa3.44□□□□□ -1.86
SSM4YIL030C ATP1P07251 545 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C APE1P14904 514 aa3.44□□□□□ -1.86
SSM4YIL030C PRI2P20457 528 aa3.44□□□□□ -1.86
SSM4YIL030C HIR2P32480 875 aa3.44□□□□□ -1.86
SSM4YIL030C PTM1P32857 523 aa3.44□□□□□ -1.86
SSM4YIL030C MRPL3P36516 390 aa3.44□□□□□ -1.86
SSM4YIL030C EMP65P40085 556 aa3.44□□□□□ -1.86
SSM4YIL030C GTS1P40956 396 aa3.44□□□□□ -1.86
SSM4YIL030C BOL2P53082 120 aa3.44□□□□□ -1.86
SSM4YIL030C LSM3P57743 89 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C PEX13P80667 386 aa3.44□□□□□ -1.86
SSM4YIL030C SKI8Q02793 397 aaPredicted RBP3.44□□□□□ -1.86
SSM4YIL030C NEJ1Q06148 342 aa3.44□□□□□ -1.86
SSM4YIL030C RTR2Q12378 196 aa3.44□□□□□ -1.86
SSM4YIL030C RTP1Q12751 981 aa3.44□□□□□ -1.86
SSM4YIL030C DFG16Q99234 619 aa3.44□□□□□ -1.86
SSM4YIL030C FLO9P39712 1322 aa3.44□□□□□ -1.86
SSM4YIL030C STE3P06783 470 aa3.44□□□□□ -1.86
SSM4YIL030C MSS116P15424 664 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C HCM1P25364 564 aa3.44□□□□□ -1.86
SSM4YIL030C SSH4P32343 579 aa3.44□□□□□ -1.86
SSM4YIL030C PPG1P32838 368 aa3.44□□□□□ -1.86
SSM4YIL030C AGP2P38090 596 aa3.44□□□□□ -1.86
SSM4YIL030C MMF1P40185 145 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C GYP8P43570 497 aa3.44□□□□□ -1.86
SSM4YIL030C SPO74P45819 413 aa3.44□□□□□ -1.86
SSM4YIL030C MNN11P46985 422 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C INN1P53901 409 aa3.44□□□□□ -1.86
SSM4YIL030C TRS31Q03337 283 aa3.44□□□□□ -1.86
SSM4YIL030C GOT1Q03554 138 aa3.44□□□□□ -1.86
SSM4YIL030C SEG1Q04279 960 aa3.44□□□□□ -1.86
SSM4YIL030C EAF1Q06337 982 aa3.44□□□□□ -1.86
SSM4YIL030C CDD1Q06549 142 aa3.44□□□□□ -1.86
SSM4YIL030C PLB3Q08108 686 aa3.44□□□□□ -1.86
SSM4YIL030C HEM2P05373 342 aa3.44□□□□□ -1.86
SSM4YIL030C YCK2P23292 546 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C CAD1P24813 409 aaKnown RBP3.44□□□□□ -1.86
SSM4YIL030C PEX34P25584 144 aa3.44□□□□□ -1.86
SSM4YIL030C YIM1P28625 365 aa3.44□□□□□ -1.86
SSM4YIL030C OAC1P32332 324 aa3.44□□□□□ -1.86
SSM4YIL030C PXA2P34230 853 aa3.44□□□□□ -1.86
SSM4YIL030C SLX1P38324 304 aa3.44□□□□□ -1.86
SSM4YIL030C YJL206CP39529 758 aa3.44□□□□□ -1.86
SSM4YIL030C YFL040WP43562 540 aa3.44□□□□□ -1.86
SSM4YIL030C TYW3P53177 273 aa3.44□□□□□ -1.86
SSM4YIL030C IMO32P53219 342 aa3.44□□□□□ -1.86
SSM4YIL030C YDR541CQ03049 344 aa3.44□□□□□ -1.86
SSM4YIL030C YMR310CQ04867 317 aaPredicted RBP3.44□□□□□ -1.86
SSM4YIL030C TMA10Q06177 86 aa3.44□□□□□ -1.86
SSM4YIL030C RAX1Q08760 435 aa3.44□□□□□ -1.86
SSM4YIL030C RRP42Q12277 265 aaPredicted RBP3.44□□□□□ -1.86
SSM4YIL030C YLR118CQ12354 227 aa3.44□□□□□ -1.86
SSM4YIL030C MHF2Q3E829 80 aa3.44□□□□□ -1.86
SSM4YIL030C PIM1P36775 1133 aa3.43□□□□□ -1.86
SSM4YIL030C LDB7P38210 180 aa3.43□□□□□ -1.86
SSM4YIL030C DSF2P38213 736 aa3.43□□□□□ -1.86
SSM4YIL030C YHR020WP38708 688 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C PTI1P39927 425 aaPredicted RBP3.43□□□□□ -1.86
SSM4YIL030C LEM3P42838 414 aa3.43□□□□□ -1.86
SSM4YIL030C SIW14P53965 281 aa3.43□□□□□ -1.86
SSM4YIL030C YDL109CQ12103 647 aa3.43□□□□□ -1.86
SSM4YIL030C PRC1P00729 532 aa3.43□□□□□ -1.86
SSM4YIL030C CCA1P21269 546 aa3.43□□□□□ -1.86
SSM4YIL030C VPS21P36017 210 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C YKL071WP36086 256 aa3.43□□□□□ -1.86
SSM4YIL030C ANR2P36090 516 aaPredicted RBP3.43□□□□□ -1.86
SSM4YIL030C GLY1P37303 387 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C MET30P39014 640 aa3.43□□□□□ -1.86
SSM4YIL030C PAC11P40960 533 aa3.43□□□□□ -1.86
SSM4YIL030C PRP24P49960 444 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C YGR266WP53326 701 aa3.43□□□□□ -1.86
SSM4YIL030C ARE2P53629 642 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SSM4YIL030C YMR226CQ05016 267 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C MRX10Q05648 414 aa3.43□□□□□ -1.86
SSM4YIL030C HRD3Q05787 833 aa3.43□□□□□ -1.86
SSM4YIL030C SWC7Q06707 132 aa3.43□□□□□ -1.86
SSM4YIL030C AAD15Q08361 143 aa3.43□□□□□ -1.86
SSM4YIL030C TFB4Q12004 338 aa3.43□□□□□ -1.86
SSM4YIL030C YRR1Q12172 810 aa3.43□□□□□ -1.86
SSM4YIL030C YKL033W-AQ86ZR7 236 aa3.43□□□□□ -1.86
SSM4YIL030C MDM12Q92328 271 aa3.43□□□□□ -1.86
SSM4YIL030C GAL80P04387 435 aa3.43□□□□□ -1.86
SSM4YIL030C CDC4P07834 779 aa3.43□□□□□ -1.86
SSM4YIL030C CHO1P08456 276 aa3.43□□□□□ -1.86
SSM4YIL030C DSF1P0CX08 502 aa3.43□□□□□ -1.86
SSM4YIL030C YNR073CP0CX09 502 aa3.43□□□□□ -1.86
SSM4YIL030C POX1P13711 748 aa3.43□□□□□ -1.86
SSM4YIL030C PPH22P23595 377 aa3.43□□□□□ -1.86
SSM4YIL030C CRM1P30822 1084 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C REG2P38232 338 aa3.43□□□□□ -1.86
SSM4YIL030C ATG14P38270 344 aa3.43□□□□□ -1.86
SSM4YIL030C YBP1P38315 674 aa3.43□□□□□ -1.86
SSM4YIL030C OSH7P38755 437 aa3.43□□□□□ -1.86
SSM4YIL030C IPI1P38803 334 aaPredicted RBP3.43□□□□□ -1.86
SSM4YIL030C SLZ1P40167 298 aa3.43□□□□□ -1.86
SSM4YIL030C GNP1P48813 663 aa3.43□□□□□ -1.86
SSM4YIL030C PRM8P53174 237 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms